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To bridge the gap between
University and Company
To bridge the gap between
University and Company
Ph. Thonart, J. Destain, M. Ongena, F. Delvigne,
J.M. Aldric, F. Weekers, S. Hiligsmann, S. Zgoulli,
P. Evrard, P. Antoine
Centre Wallon de Biologie Industrielle 1
Gembloux Agro Bio Tech
Passage des Déportés, 2
5030 Gembloux
Belgique
Université de Liège
Boulevard du Rectorat, 29 B40
4000 Liège
Belgique
Centre Wallon de Biologie Industrielle 2
CWBI - ULg
CWBI- Gembloux
Agro Biotech
3
From cells to end products
Strain physiological
study
Strain
screening
Fermentation
technology
Metabolite or
cell harvest and
conditioning Reactors
. .
.
. .
. .
.
.
.
.
4
Screening on plates
Flasks
5
2L fermentor
20 L fermentor
6
500 and 2000 L fermentors
2000 L fermentor
7
Centrifugation
Ultrafiltration
Atomisation
8
To bridge the gap
9
The missions
of the University
- Assistance to Community
- Teaching
- Research
10
Precompetitive research
Transfer to the company
Applied research
Pilot production
Fundamental research
11
The researcher must develop
a scientific strategy
12
-Publication of research results
-Secret results
-Results protected by patents
Choices made by the researcher
13
The University has a potential for
innovation
Innovation will require more and more
scientific knowledge
14
* Publication of results
* Obtaining patents
Valorization of research
Popularization of results
Transfer to existing industries
integration into business strategies
Creation of spin-off
Enable innovations in non-industrialized areas
Expression of creativity by the finalization of a
product including the economic aspect
15
Publications
To develop quality :
Impact factor, reviewed articles,
international journals, etc ..
16
- Conferences
- Training of social environments
- Making popularization
documents
Popularization of results
17
18
The CWBI develops a
new concept
Microbial ecology
applied to industry
Biodiversity
(screening new
microorganisms)
Taxonomy studies
Biopesticides
Microorganisms to
replace chemical
products
Post harvest treatment
New fermentation for
Food process
(heterofermentation)
Starters for food and
Pharmaceutical
applications
(probiotics)
New cleaning procedures
(to define the conditions
to prevent infections)
Waste water treatment with
starters (cleaning tubes,
grease trap…)
Production of
ethanol and H2
from waste water
19
20
Products
Selection and production of lactic acid bacteria
- Pure cultures – Formulation - conditioning
Commercialisation with following sectors
- Pharmaceutical: food supplements (nutraceuticals)
and probiotics
- Food : starters (fermented products) and
functional foods
21
2222
Facilities
23
Products
- Pure microbial cultures
- Biological activators
- Enzymes (lipase)
- Septic tank
- Starters
- Waste Water Treatment
- Plant biocontrol
- Functional microorganisms (Saccharomyces boulardii,
enrriched yeast : Se, Ca2+ ,Cu2+, Zn2+)
- Probiotics
Development of plant biocontrol : Bacillus /
Pseudozyma / Trichoderma
24
Individual waste
water treatment plantSeptic tank
Biological
unblocker Grease traps
Products for biological
household
25
Facilities
26
27
Second example :
Pseudozyma
flocculosa and
Powdery Mildew Fungi
Sporothrix flocculosa; Ascomycetous
(Traquair et al., 1987)
Found in association with
clover powdery mildew
Pseudozyma flocculosa;
Basidiomycetous;
yeastlike organism
(Boekhout, et al. 2000)
28
29
On the road to biofungicide
development
Prof. R. Belanger of the Biocontrol Laboratory at Laval
University initiated a research program on powdery
mildew biocontrol.
1970 - The tolerance of many fungal plant pathogens to
fungicide increase
1989 - Sporothrix flocculosa and regulosa were identified
as being highty effective for reducing the infection
of cucumber with powdery mildew
1995 - Sporothrix became Pseudozyma (DNA sequencing
techniques)
30
Between 1989-2002
- Fundamental research and technical approach
for the Sporothrix conidies production in
collaboration with CWBI.
- Several trials were carried out under semi-
commercial conditions of greenhouse cucumber
and rose production in different countries
2000 - Patent – Methods and composition for the
biological control of plant diseases
2002-2013 : Dossier for the registration in Europe
31
Netherlands
Colombia
France
Greece
…
Field trials
Formulation
33
Action of Pseudozyma
1st hypothesis : Production of fatty acids
2nd hypothesis : Production of glycolipid - floculosin -
categorized as biosurfactants
3rd hypothesis : competition mechanism
34
Conidies production in fermentors
35
Application support and nutraceuticals
1. Vitamins for direct compression : Vitamin B1 (Thiamine), B6 (pyridoxine
hydrochloride), B12 (Cyanocobalamin) , C coated with vegetable fat
2. Microencapsulated Flavor : Microbelcaps makes a spray micro-
encapsulation of various essential oils, oleoresins, alcoholates, herbal and
natural identical molecules : lemon scent, aroma mint, apple, mango, cola,
hazelnut, yogurt, orange flavor
3. Oil rich in Omega 3 microencapsulated in acid and base resistant coatings :
microencapsulated borage oil, linseed and olive oil
4. Coated Microorganisms: Lactobacillus casei, acidophilus, bulgarius,
rhamnosus, plantarum, Bifidobacterium infantis, Streptococcus thermophilic,
Lactococcus lactis
5. Liquid papain, powder papain and coated papain
6. Dry extracts from fermented papaya : extract from fermented flavored
papaya
Products
36
Pharmaceutical Application
1. Coated Vitamins for direct compression: Certifications: Good
Manufacturing Practice (GMP) and Drug Master File (DMF EU) : Vitamin B1,
Vitamin B6, Vitamin B12
2. Biotin 0.1%
3. Leucine
4. Vitamin C coated with vegetable fat
5. Phenylalanine
6. N-acetyl cysteine microencapsulated
37
Facilities
38
The company develops biological processes for the treatment and
valorisation of organic wastes, by-products of agro-food industries
and hydrocarbons.
It also realizes investment studies for the energetic valorisation of
biogas.
Biotreatment's potential is based on his skills in microbiology and
management of facilities for depollution and biomass treatment.
These are reenforced by collaborations with many academic
laboratories specialised in environmental and biochemical sciences
e.g. the Walloon Centre of Industrial Biology for microorganisms
selection, characterisation and production.
39
40
41
Facilities
42
Relationship between Industry-University
- Dialogue
- Respect of each partner
in economic terms,
in terms of intellectual property protection
43
3 axes
Microbial
biodiversity
Environment
Avenues of
collaborations
A strategy for a collaboration with
developing countries
44
Tunisia
Senegal
Mali
Burkina Faso
Fermented milk:
M ’Bannick (Senegal)
Lben (Tunisia)
Fermented locust beans :
(Parkia biglobosa)
Netetu (Senegal)
Sumbala (Burkina Faso, Mali)
Alcohol or fruit vinegar :
Senegal, Burkina Faso,
Congo (Brazzaville)
Congo
Fermented products and
representative countries
45
Traditional
artisan
fermentations
= natural and
spontaneous
innoculation
Empirical method
Variable duration
Variable quality
Poor hygiene
Controlled
industrial
fermentations
= add of starter
(selected
microorganisms’
culture)
Reproducible
Rapid
Quality
Organoleptic
Hygiene
Stability
Microorganisms
Raw
material
Raw
material
Fermentation
conditions
(temperature,
aeration, pH,…)
variable defined
46
The example of Senegalese fermented milk: M’bannick
M’Bannick : a taste and a flavour that is loved by the Senegaleses
Technology: small unreliable workshops
intoxication problems
Identification of responsible germs:
Lactobacillus plantarum
Lactococcus lactis lactis
Lactococcus lactis var. diacetylactis
47
The example of Netetu (Sénégal) –
Soumbala (Burkina Faso)
Exchange North-South
Fermented grains used as condiments
Market : 30 billions of FCFA (in Burkina)
26 thousands tons of products
Microbial biodiversity
48
Acid flour produced by milling, fermenting and drying millet grains “pearl
millet" (Pennisetum glaucum), African cereal with small round grains,
resistant to drought.
Treatment: fermentation controlled by a lactic bacterium (Lactobacillus
plantarum), followed by drying by atomization (technique used for making
milk powder, coffee etc.)
Millet flour
49
General diagram for production
Raw millet flour
(10% Hum, Ø 0,8 mm)

Humidification (50% water)

Adding starter mix

Fermentation during 18-20 h at 30°C

Dilution (75% water)

Atomization (230°/90°C)

Atomized acid flour
(6-8% Hum)
Bakery
mixer
Millet flour dough
Fermented flour
Manual rolling Donuts, with raisins
50
Production of vinegar
-Development of 2 technologies
- Searching for partners
-Valorization
51
Description of Acetobacter senegalensis sp. nov.:
 Gram-, no endospore formation
 Coccoid, 0.8 µm of width, 1.6 à 2 µm in
length and ~ 0.6 µm in Ø.
 Oxydase – and catalase +
 Optimal growth at 35°C on YGM
 Cells are opaque, convex and motile.
 G+C% of DNA is 56.0 mol %.
 Characterized by several phenotypic
features.
 The standard strain of CWBI-B418 is
LMG 23690T
52
 By combing the phenotypic and genotypic results:
CWBI-B418 is a new species
Acetobacter senegalensis sp.nov
53
Tank for the Orléans method
54
- Selection of products (gum arabic, bromelain)
- Development of treatment protocols
- Transfer of raw materials towards North
- Transfer of procedures towards South
- Commercialization South-South, South-North, North-North
- Creation of spinoffs in the North and South
Avenues of collaboration
55
Classify the gum from Burkina based on these quality
criteria (valorization South-South, South-North).
Purchase of this gum by the C.W.B.I. in order to develop
the purification procedure at industrial scale.
Economic study on the organization and the flow of gum
production in Burkina and in Wallonia.
Gum arabic
56
57
Purification procedure
Bringing into solution
Filtration on filter press
Clarifying filtration on filter plates
Drying of the solution by atomization
58
Bringing into solution
Clarifying filtration
on filter plates
Drying of the solution
by atomization
Filtration on filter press
Aggregates
Powder 59
Study of anthocyanes from
Hibiscus sp.
60
Hibiscus
Malvaceae, Hibiscus sabdariffa sp
Sorrel, Roselle, sour tea, bissap
Varieties:
 Vimto: dark red calyxes
 Koor: very acidic
61
Procedure
Extraction
Concentration
Juice containing 50% dry matter
Atomization
Instant bissap powder
I.T.A.
R.W.
I.T.A.
62
Instant bissap bags
63
64
Setting up an analytical laboratory
65
Biological
activity
study :
analyses
(cellulose,
fatty acids,
DBO5, …
CH
4
CO
2
Biogaz
Solids
Lixiviats
-Determination of biological age
-Prediction of compaction
-Prediction of future activity
Landfill
66
67
Center: sitemap of Saaba.
Periphery: different methods used for discharge collecting and composting
and landfill development
68
Center: empty pilot landfill for the Saaba discharge.
Periphery: same landfill during filling, followed be biological activity,
compacting, laying of the mineral cover and final profile. 69
Innovation :
a necessity for North and South
70
71
- From the fundamental research to a final product – a
long road
- Many biocontrol products will never satisfy the
requirement imposed on chemicals to be 95-100%
effective
- A dream or a reality. It is the problem in relation with
the fundation of spin-off company
Conclusions
Bronze head from Burkina Faso
(Private Collection P. Thonart)
72
73
Art or Money

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Mardis de l'AIGx - Philippe THONART

  • 1. To bridge the gap between University and Company To bridge the gap between University and Company Ph. Thonart, J. Destain, M. Ongena, F. Delvigne, J.M. Aldric, F. Weekers, S. Hiligsmann, S. Zgoulli, P. Evrard, P. Antoine Centre Wallon de Biologie Industrielle 1
  • 2. Gembloux Agro Bio Tech Passage des Déportés, 2 5030 Gembloux Belgique Université de Liège Boulevard du Rectorat, 29 B40 4000 Liège Belgique Centre Wallon de Biologie Industrielle 2
  • 3. CWBI - ULg CWBI- Gembloux Agro Biotech 3
  • 4. From cells to end products Strain physiological study Strain screening Fermentation technology Metabolite or cell harvest and conditioning Reactors . . . . . . . . . . . 4
  • 6. 2L fermentor 20 L fermentor 6
  • 7. 500 and 2000 L fermentors 2000 L fermentor 7
  • 10. The missions of the University - Assistance to Community - Teaching - Research 10
  • 11. Precompetitive research Transfer to the company Applied research Pilot production Fundamental research 11
  • 12. The researcher must develop a scientific strategy 12
  • 13. -Publication of research results -Secret results -Results protected by patents Choices made by the researcher 13
  • 14. The University has a potential for innovation Innovation will require more and more scientific knowledge 14
  • 15. * Publication of results * Obtaining patents Valorization of research Popularization of results Transfer to existing industries integration into business strategies Creation of spin-off Enable innovations in non-industrialized areas Expression of creativity by the finalization of a product including the economic aspect 15
  • 16. Publications To develop quality : Impact factor, reviewed articles, international journals, etc .. 16
  • 17. - Conferences - Training of social environments - Making popularization documents Popularization of results 17
  • 18. 18
  • 19. The CWBI develops a new concept Microbial ecology applied to industry Biodiversity (screening new microorganisms) Taxonomy studies Biopesticides Microorganisms to replace chemical products Post harvest treatment New fermentation for Food process (heterofermentation) Starters for food and Pharmaceutical applications (probiotics) New cleaning procedures (to define the conditions to prevent infections) Waste water treatment with starters (cleaning tubes, grease trap…) Production of ethanol and H2 from waste water 19
  • 20. 20
  • 21. Products Selection and production of lactic acid bacteria - Pure cultures – Formulation - conditioning Commercialisation with following sectors - Pharmaceutical: food supplements (nutraceuticals) and probiotics - Food : starters (fermented products) and functional foods 21
  • 23. 23
  • 24. Products - Pure microbial cultures - Biological activators - Enzymes (lipase) - Septic tank - Starters - Waste Water Treatment - Plant biocontrol - Functional microorganisms (Saccharomyces boulardii, enrriched yeast : Se, Ca2+ ,Cu2+, Zn2+) - Probiotics Development of plant biocontrol : Bacillus / Pseudozyma / Trichoderma 24
  • 25. Individual waste water treatment plantSeptic tank Biological unblocker Grease traps Products for biological household 25
  • 27. 27 Second example : Pseudozyma flocculosa and Powdery Mildew Fungi Sporothrix flocculosa; Ascomycetous (Traquair et al., 1987) Found in association with clover powdery mildew Pseudozyma flocculosa; Basidiomycetous; yeastlike organism (Boekhout, et al. 2000)
  • 28. 28
  • 29. 29 On the road to biofungicide development Prof. R. Belanger of the Biocontrol Laboratory at Laval University initiated a research program on powdery mildew biocontrol. 1970 - The tolerance of many fungal plant pathogens to fungicide increase 1989 - Sporothrix flocculosa and regulosa were identified as being highty effective for reducing the infection of cucumber with powdery mildew 1995 - Sporothrix became Pseudozyma (DNA sequencing techniques)
  • 30. 30 Between 1989-2002 - Fundamental research and technical approach for the Sporothrix conidies production in collaboration with CWBI. - Several trials were carried out under semi- commercial conditions of greenhouse cucumber and rose production in different countries 2000 - Patent – Methods and composition for the biological control of plant diseases 2002-2013 : Dossier for the registration in Europe
  • 33. 33 Action of Pseudozyma 1st hypothesis : Production of fatty acids 2nd hypothesis : Production of glycolipid - floculosin - categorized as biosurfactants 3rd hypothesis : competition mechanism
  • 35. 35
  • 36. Application support and nutraceuticals 1. Vitamins for direct compression : Vitamin B1 (Thiamine), B6 (pyridoxine hydrochloride), B12 (Cyanocobalamin) , C coated with vegetable fat 2. Microencapsulated Flavor : Microbelcaps makes a spray micro- encapsulation of various essential oils, oleoresins, alcoholates, herbal and natural identical molecules : lemon scent, aroma mint, apple, mango, cola, hazelnut, yogurt, orange flavor 3. Oil rich in Omega 3 microencapsulated in acid and base resistant coatings : microencapsulated borage oil, linseed and olive oil 4. Coated Microorganisms: Lactobacillus casei, acidophilus, bulgarius, rhamnosus, plantarum, Bifidobacterium infantis, Streptococcus thermophilic, Lactococcus lactis 5. Liquid papain, powder papain and coated papain 6. Dry extracts from fermented papaya : extract from fermented flavored papaya Products 36
  • 37. Pharmaceutical Application 1. Coated Vitamins for direct compression: Certifications: Good Manufacturing Practice (GMP) and Drug Master File (DMF EU) : Vitamin B1, Vitamin B6, Vitamin B12 2. Biotin 0.1% 3. Leucine 4. Vitamin C coated with vegetable fat 5. Phenylalanine 6. N-acetyl cysteine microencapsulated 37
  • 39. The company develops biological processes for the treatment and valorisation of organic wastes, by-products of agro-food industries and hydrocarbons. It also realizes investment studies for the energetic valorisation of biogas. Biotreatment's potential is based on his skills in microbiology and management of facilities for depollution and biomass treatment. These are reenforced by collaborations with many academic laboratories specialised in environmental and biochemical sciences e.g. the Walloon Centre of Industrial Biology for microorganisms selection, characterisation and production. 39
  • 40. 40
  • 41. 41
  • 43. Relationship between Industry-University - Dialogue - Respect of each partner in economic terms, in terms of intellectual property protection 43
  • 44. 3 axes Microbial biodiversity Environment Avenues of collaborations A strategy for a collaboration with developing countries 44
  • 45. Tunisia Senegal Mali Burkina Faso Fermented milk: M ’Bannick (Senegal) Lben (Tunisia) Fermented locust beans : (Parkia biglobosa) Netetu (Senegal) Sumbala (Burkina Faso, Mali) Alcohol or fruit vinegar : Senegal, Burkina Faso, Congo (Brazzaville) Congo Fermented products and representative countries 45
  • 46. Traditional artisan fermentations = natural and spontaneous innoculation Empirical method Variable duration Variable quality Poor hygiene Controlled industrial fermentations = add of starter (selected microorganisms’ culture) Reproducible Rapid Quality Organoleptic Hygiene Stability Microorganisms Raw material Raw material Fermentation conditions (temperature, aeration, pH,…) variable defined 46
  • 47. The example of Senegalese fermented milk: M’bannick M’Bannick : a taste and a flavour that is loved by the Senegaleses Technology: small unreliable workshops intoxication problems Identification of responsible germs: Lactobacillus plantarum Lactococcus lactis lactis Lactococcus lactis var. diacetylactis 47
  • 48. The example of Netetu (Sénégal) – Soumbala (Burkina Faso) Exchange North-South Fermented grains used as condiments Market : 30 billions of FCFA (in Burkina) 26 thousands tons of products Microbial biodiversity 48
  • 49. Acid flour produced by milling, fermenting and drying millet grains “pearl millet" (Pennisetum glaucum), African cereal with small round grains, resistant to drought. Treatment: fermentation controlled by a lactic bacterium (Lactobacillus plantarum), followed by drying by atomization (technique used for making milk powder, coffee etc.) Millet flour 49
  • 50. General diagram for production Raw millet flour (10% Hum, Ø 0,8 mm)  Humidification (50% water)  Adding starter mix  Fermentation during 18-20 h at 30°C  Dilution (75% water)  Atomization (230°/90°C)  Atomized acid flour (6-8% Hum) Bakery mixer Millet flour dough Fermented flour Manual rolling Donuts, with raisins 50
  • 51. Production of vinegar -Development of 2 technologies - Searching for partners -Valorization 51
  • 52. Description of Acetobacter senegalensis sp. nov.:  Gram-, no endospore formation  Coccoid, 0.8 µm of width, 1.6 à 2 µm in length and ~ 0.6 µm in Ø.  Oxydase – and catalase +  Optimal growth at 35°C on YGM  Cells are opaque, convex and motile.  G+C% of DNA is 56.0 mol %.  Characterized by several phenotypic features.  The standard strain of CWBI-B418 is LMG 23690T 52
  • 53.  By combing the phenotypic and genotypic results: CWBI-B418 is a new species Acetobacter senegalensis sp.nov 53
  • 54. Tank for the Orléans method 54
  • 55. - Selection of products (gum arabic, bromelain) - Development of treatment protocols - Transfer of raw materials towards North - Transfer of procedures towards South - Commercialization South-South, South-North, North-North - Creation of spinoffs in the North and South Avenues of collaboration 55
  • 56. Classify the gum from Burkina based on these quality criteria (valorization South-South, South-North). Purchase of this gum by the C.W.B.I. in order to develop the purification procedure at industrial scale. Economic study on the organization and the flow of gum production in Burkina and in Wallonia. Gum arabic 56
  • 57. 57
  • 58. Purification procedure Bringing into solution Filtration on filter press Clarifying filtration on filter plates Drying of the solution by atomization 58
  • 59. Bringing into solution Clarifying filtration on filter plates Drying of the solution by atomization Filtration on filter press Aggregates Powder 59
  • 60. Study of anthocyanes from Hibiscus sp. 60
  • 61. Hibiscus Malvaceae, Hibiscus sabdariffa sp Sorrel, Roselle, sour tea, bissap Varieties:  Vimto: dark red calyxes  Koor: very acidic 61
  • 62. Procedure Extraction Concentration Juice containing 50% dry matter Atomization Instant bissap powder I.T.A. R.W. I.T.A. 62
  • 64. 64
  • 65. Setting up an analytical laboratory 65
  • 66. Biological activity study : analyses (cellulose, fatty acids, DBO5, … CH 4 CO 2 Biogaz Solids Lixiviats -Determination of biological age -Prediction of compaction -Prediction of future activity Landfill 66
  • 67. 67
  • 68. Center: sitemap of Saaba. Periphery: different methods used for discharge collecting and composting and landfill development 68
  • 69. Center: empty pilot landfill for the Saaba discharge. Periphery: same landfill during filling, followed be biological activity, compacting, laying of the mineral cover and final profile. 69
  • 70. Innovation : a necessity for North and South 70
  • 71. 71 - From the fundamental research to a final product – a long road - Many biocontrol products will never satisfy the requirement imposed on chemicals to be 95-100% effective - A dream or a reality. It is the problem in relation with the fundation of spin-off company Conclusions
  • 72. Bronze head from Burkina Faso (Private Collection P. Thonart) 72