Ewald (J.Z.) Groenewald - Opening Plenary

Identifying Quarantine Organisms with DNA Barcodes – QBOL and its Contribution to Q-bank presented by Ewald (J.Z.) Groenewald www.qbol.org [email_address]

EPPO – European and Mediterranean Plant Protection Organization ,[object Object],[object Object],A1 (absent) A2 (controlled) Total Fungi 36 26 62 Bacteria & phytoplasmas 12 24 36 Viruses & virus-like 23 21 44 Insects & mites 116 57 173 Nematodes 5 11 16 Parasitic plants 11 10 21 203 149 352

Problem definition ,[object Object],[object Object],[object Object],[object Object],EPPO region

QBOL – The project ,[object Object],[object Object],[object Object],[object Object],[object Object]

QBOL – 20 Global Partners

QBOL – The 11 workpackages ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

QBOL – Four main objectives ,[object Object],[object Object],[object Object],[object Object]

QBOL – Overall progress ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

WP2 Fungi – Q barcode results Note: Species names according to the EPPO lists Mycosphaerella gibsonii http://photos.eppo.org/ Interspecific variation TEF CAL RPB2 ITS ACT TUB Ceratocystis fimbriata f. sp. platani N/A 97% (551/ 569) Ceratocystis virescens N/A 92% (473/ 514) Mycosphaerella gibsonii 99% (309/ 312 ) N/D 93% (322/ 344) 100% (504/ 504) 99% (531/ 535) 97% (386/ 395) Phaeoramularia angolensis 96% (127/ 132) 91% (152/ 166) 83% (173/ 206) 95% (503/ 524) 89% (478/ 536) 92% (104/ 113) Monilinia fructicola 78% (376/ 482) 99% (495/ 499)

WP2 Fungi – Q barcode results Note: Species names according to the EPPO lists Ceratocystis fagacearum http://photos.eppo.org/ Interspecific variation TEF CAL RPB2 ITS ACT TUB Mycosphaerella dearnessii 91% (127/ 139) 88% (283/ 319) 79% (155/ 195) 92% (432/ 468) 93% (310/ 332) 84% (177/ 210) Mycosphaerella laricis-leptolepidis 96% (124/ 128) 93% (255/ 273) 79% (142/ 179) 97% (484/ 497) 93% (338/ 361) 82% (179/ 217) Davidiella (Mycosphaerella) populorum 92% (132/ 142) 91% (167/ 182) N/D 98% (459/ 467) 88% (377/ 425) 86% (370/ 428) Septoria lycopersici var. malagutii 99% (886/ 892 ) 97% (398/ 407) 99% (347/ 348) 99% (500/ 502) 98% (542/ 553) 99% (513/ 516)

QBOL – Conclusions ,[object Object],[object Object],[object Object],[object Object]

Special thank you to: ,[object Object],[object Object],[object Object],Thank you for your attention! Dothistroma septosporum Studies in Mycology 50:552 [email_address] Visit www.qbol.org and www.q-bank.eu for more information.

Ewald (J.Z.) Groenewald - Opening Plenary

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Ewald (J.Z.) Groenewald - Opening Plenary

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