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Polymerase Chain Reaction “Xeroxing” DNA
Life is not fair! ,[object Object],[object Object]
Still not fair! ,[object Object],[object Object],[object Object]
Polymerase Chain Reaction ,[object Object],[object Object],[object Object],[object Object]
PCR:  Amplification of DNA
PCR:  Amplification of DNA ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
PCR basis:  Directionality of DNA backbone
Recall that DNA is antiparallel
Heat causes denaturing—H-bonds between base pairs “break”
Annealing ,[object Object],[object Object],[object Object],[object Object],[object Object]
DNA Polymerase moves in a  5’  3’ direction ,[object Object],[object Object],[object Object]
Note:  SYNTHESIS occurs in the 5’  3’ direction
Where do we get loads of this DNA polymerase enzyme? ,[object Object],[object Object],[object Object],[object Object]
Old Faithful!
Taq polymerase ,[object Object],[object Object]
Making PCR twice as fast! ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
 
PCR:  Essential Reagents ,[object Object],[object Object],[object Object],[object Object],[object Object]
 
PCR:  Pipetting the reagents into the reaction tube
“ PCR machine”:  The thermocycler ,[object Object],[object Object],[object Object]
First denaturation ,[object Object],[object Object],[object Object]
 
Binding of primers during annealing ,[object Object]
Thermocycler lowered to annealing temperature ,[object Object]
PCR:  Polymerization by High –temperature DNA polymerase ,[object Object],[object Object]
 
Thermocycler at polymerization temperature ,[object Object]
PCR denaturation step repeated ,[object Object]
PCR:  Annealing and polymerization repeated ,[object Object],[object Object],[object Object]
 
Denaturation repeated a third time ,[object Object],[object Object]
 
Our hero!  The thermocycler! ,[object Object],[object Object],[object Object]
Repeat, repeat, repeat! ,[object Object],[object Object]
After 30 cycles this becomes one billion!  2 30
What next? ,[object Object]
Applications of PCR ,[object Object],[object Object]

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Polymerase Chain Reaction