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The Web as a Tool
Rather Than a Threat
http://www.flickr.com/photos/davidcjones/1422043515
About me.
I live in Bath




http://www.flickr.com/photos/andypowe11/3915450391
I work at RAL
I get up in the morning




http://www.flickr.com/photos/andypowe11/3251538402
...and catch a train




http://www.flickr.com/photos/mattbuck007/3710451826
...and a bus
I work on...



Wikimedia Commons                               Wikimedia Commons
Succinate_Dehydrogenase_1YQ3_and_Membrane.png   MGMT BDNA_1T38.png
...and get to do cool stuff
Mixture of small-lab work...
...and big facility experiments
Lots of reading...




http://www.flickr.com/photos/loty/326761635
...meetings...




http://www.flickr.com/photos/amagill/38961674
...too much travel...
http://www.flickr.com/photos/22819720@N02/2306780847
...which leads to
too much of this
http://flickr.com/photos/cliche/120070310/
http://www.flickr.com/photos/amagill/38961674
http://www.flickr.com/photos/loty/326761635
http://www.flickr.com/photos/mattbuck007/3710451826
http://www.flickr.com/photos/andypowe11/3251538402
http://www.flickr.com/photos/22819720@N02/2306780847
http://www.flickr.com/photos/davidcjones/1422043515
The first step...




http://www.flickr.com/photos/laprimadonna/3611292727/
...is to admit we have




http://www.flickr.com/photos/schnurrbart/43568532/ CC-BY-SA
Submissions to Genbank
100,000,000,000


 75,000,000,000


 50,000,000,000


 25,000,000,000


             0
              1982   1986   1990   1994   1998   2002   2006
Average Capacity of Human Scientist
5.00


3.75


2.50


1.25


  0
  1982     1986   1990   1994   1998   2002   2006
The human scientist
     (that’s us)
 Does. Not. Scale.
The web scales
Those things you hate
  about the web?
...these just show how
  well the web scales
The web is full of pieces of
   other people’s work
I iz ur band
 hangin in
    ur gel
               ...so why doesn’t
               this work better
               for science?
Partly the tools...

http://www.flickr.com/photos/hinkelstone/1357630710
...size of the community...

http://www.flickr.com/photos/craigcloutier/3818784742
...and attitude



                  http://flickr.com/photos/zanotti/314391903/ CC-BY
Let’s start with the tools...
http://www.flickr.com/photos/flattop341/1085739925
Are there any good web
  tools for science...?
Literature management
...but this is just
   aggregation
Where’s the network?




http://www.flickr.com/photos/luc/2515255357
Question #1
Does it do something useful?




http://www.flickr.com/photos/vrogy/514733529
If it doesn’t. It isn’t.
Question #2
Does it work for your group?
If it doesn’t work here...




http://www.flickr.com/photos/respres/2476519142
...then it won’t work here

      http://www.flickr.com/photos/mararie/3313582639/ CC-BY-SA
Question #3
Is there a community that
  is useful to you there?
http://www.flickr.com/photos/dullhunk/3746501010
http://search.twitter.com/search?q=stephen_curry+cameronneylon
...and if not are you
prepared to build one?
The skill for the 21st
century scientist?



http://www.flickr.com/photos/victoriapeckham/164175205
Network wiring and maintenance




http://www.flickr.com/photos/sneddon/2415792655
A lot of the noise...
...is maintaining connections
You have to build it...




http://www.flickr.com/photos/luc/2515255357
Founder effects.
But does it work?
An assertion.
I am made aware of every
significant document released
and every funding opportunity in
Europe and North America
relating to web based social
tools for science, open access
publication, and data policies
within 48 hours of their release.
Without active searching.
http://friendfeed.com
http://tinyurl.com/dku869
Pulling items from external services via RSS
A shared social net
Sharing the load




http://www.flickr.com/photos/joi/2941559903 CC-BY
http://tinyurl.com/friendfeed-mthk-request
27 January 2009




http://gowers.wordpress.com/
27 January 2009

                 February 1 2009




http://gowers.wordpress.com/
27 January 2009

                 February 1 2009


                               March 10 2009




http://gowers.wordpress.com/   Nature, 15 October 2009
Hundreds of thousands...
http://onschallenge.wikispaces.com/Exp026
http://tinyurl.com/ons-challenge-spreadsheet
http://oru.edu/cccda/sl/descriptorspace/ds.php
http://slurl.com/secondlife/Drexel/165/178/24
200 individual measurements
       (plus 70 literature values)
    20 researchers in four countries
  One undergraduate chemistry class
$6000 funding (for prizes and chemicals)
Beautiful Data
                                      O’Reilly Media spreads the knowledge of
                                      innovators through its books, online services,
                                      magazines, research, and conferences. Get the
                                      information you need from the experts you trust;
                                      visit www.oreilly.com to purchase this book.
                                      Get 30% OFF the print or ebook version of this
                                      book by entering discount code ABF09 at checkout.

                                      Beautiful Data
                                      Edited by Toby Segaran & Jeff Hammerbacher
                                      July 2009, ISBN 9780596157111
                                      382 pages, $44.99



Spreading the knowledge of innovators                                                       oreilly.com

                            ©2009 O’Reilly Media, Inc. O’Reilly logo is a registered trademark of O’Reilly Media, Inc. 90562
Rapid.
Efficient.
Superficial?
Lost in the stream...




http://flickr.com/photos/jason_burmeister/2053139930 CC-BY
http://flickr.com/photos/virtualsugar/316200555/ CC-BY
But if your objects are not
  open and available?
The more you publish, the more
  embedded in the network
Small, specific, examples.
 Relatively, few big wins
And limited to certain domains
100%




50%
100%




50%
100%




50%
100%




50%
100%




50%
100%




50%
100%




We are still around here...
50%
...but the network is growing
4


3
    50%

2


1
100%




50%
4


3
    50%

2


1
So what to do?
What is your problem?
Is there a good tool?
http://www.flickr.com/photos/flattop341/1085739925
Does it suit you/your group?




http://www.flickr.com/photos/micha2305/2706588290/
Is there a community?




http://www.flickr.com/photos/laffy4k/88836657
Are you willing to build one?


http://www.flickr.com/photos/nihilenz/2545518545
Choose to publish more
This is not going away
Learn to cope.
Threat or opportunity?
Cameron.Neylon@stfc.ac.uk
http://blog.openwetware.org/scienceintheopen
http://slideshare.net/cameronneylon
Twitter:     @cameronneylon
Friendfeed: cameronneylon


Thanks to:
Sciencetwists, Friendfeeders, and the wider online
community for ideas, criticism, and conversations.


Deepak Singh, Larry Lessig, Andy Powell, and
John Wilbanks for presentation inspiration.


Flickr (and in particular @andypowe11) for images

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The web as a tool - rather than a threat