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www.biocurious.org
                                        a hackerspace for biotech
                                        experiment with friends!


            Citizen Microbiology Workshop
               UC Davis, Jan 23-24, 2012
                   Patrik D’haeseleer
            patrikd@gmail.com @PatrikD

@BioCuriousLab BioCurious.org meetup.com/BioCurious
From garage lab to roving meetup to hackerspace

• Started as a garage research lab
• Has grown into world largest
  DIYbio meetup, >700 members
• Biocurious recently opened a
  2400 sq.ft. space in Sunnyvale
• Currently BSL-1, soon to be BSL-2
• Funded by Kickstarter
  donations, membership and class
  fees
• Education, Collaboration, Innovat
  ion
Classes at BioCurious
•   ~2 classes/week; 10-40 people at a time
•   Winogradsky columns
•   Build your own Biosphere
•   GFP expression in E. coli
•   DNA barcoding
•   Bioinformatics
•   PCR
•   …
BioCurious Community Project proposals
•   Isolate toxin-degrading bacteria
•   Testing alternative medicine/food supplements
•   Armpit microbiome (with Quantified Self community)
•   Kombucha forensics – provenance of starter cultures
•   Aquarium/aquaponics microbiome
•   Tracking dandelion dispersal
•   Fish DNA barcoding (class last week)

Constraints:
• No BSL-2 yet no env. isolates, human samples
• Shoestring budget no large-scale sequencing
    But we’d love to strike up collaborations!
Citizen Science?
• Not merely crowdsourcing!
    You can do citizen science without crowdsourcing, and
      crowdsourcing without any science (e.g. Mechanical Turk)
• Citizens as partners in the scientific process, not
  merely sample providers

•   Outreach and education
•   “On the job” training (e.g. “expert” Foldit players)
•   Access to data
•   Engage in analysis of the results
•   Acknowledge key contributions (e.g. Hanny’s
    Voorwerp)
www.biocurious.org
                                        a hackerspace for biotech
                                        experiment with friends!


            Citizen Microbiology Workshop
               UC Davis, Jan 23-24, 2012
                   Patrik D’haeseleer
            patrikd@gmail.com @PatrikD

@BioCuriousLab BioCurious.org meetup.com/BioCurious

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BioCurious Citizen Microbiology Workshop

  • 1. www.biocurious.org a hackerspace for biotech experiment with friends! Citizen Microbiology Workshop UC Davis, Jan 23-24, 2012 Patrik D’haeseleer patrikd@gmail.com @PatrikD @BioCuriousLab BioCurious.org meetup.com/BioCurious
  • 2. From garage lab to roving meetup to hackerspace • Started as a garage research lab • Has grown into world largest DIYbio meetup, >700 members • Biocurious recently opened a 2400 sq.ft. space in Sunnyvale • Currently BSL-1, soon to be BSL-2 • Funded by Kickstarter donations, membership and class fees • Education, Collaboration, Innovat ion
  • 3. Classes at BioCurious • ~2 classes/week; 10-40 people at a time • Winogradsky columns • Build your own Biosphere • GFP expression in E. coli • DNA barcoding • Bioinformatics • PCR • …
  • 4. BioCurious Community Project proposals • Isolate toxin-degrading bacteria • Testing alternative medicine/food supplements • Armpit microbiome (with Quantified Self community) • Kombucha forensics – provenance of starter cultures • Aquarium/aquaponics microbiome • Tracking dandelion dispersal • Fish DNA barcoding (class last week) Constraints: • No BSL-2 yet no env. isolates, human samples • Shoestring budget no large-scale sequencing But we’d love to strike up collaborations!
  • 5. Citizen Science? • Not merely crowdsourcing! You can do citizen science without crowdsourcing, and crowdsourcing without any science (e.g. Mechanical Turk) • Citizens as partners in the scientific process, not merely sample providers • Outreach and education • “On the job” training (e.g. “expert” Foldit players) • Access to data • Engage in analysis of the results • Acknowledge key contributions (e.g. Hanny’s Voorwerp)
  • 6. www.biocurious.org a hackerspace for biotech experiment with friends! Citizen Microbiology Workshop UC Davis, Jan 23-24, 2012 Patrik D’haeseleer patrikd@gmail.com @PatrikD @BioCuriousLab BioCurious.org meetup.com/BioCurious