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Background on stem rust and Rpg1
AvrRpg1 genes/proteins
RGD peptides and rust control
Summary/Speculations
Stem, leaf sheaths, leaf blade, parts of the
head
Tearing of outer layers of plant tissue/
Shriveled grains
70-90% yield loss
70-90% crop
loss in wheat
and barley
Devastated
the Midwest
barley crop
Confers resistance to several races of
Puccinia graminis f. sp. tritici
Brueggeman et al., PNAS, 2002
Map based cloning from
cultivar “Morex”
pK1 pK2
1 837
Morex GP GP/Rpg1T1 Horvath et al.,
PNAS 2003
GP: Golden Promise
Expressed constitutively in all organs
Expressed at higher levels in the leaf
epidermis!!!
Does not significantly modulate in response to
pathogen attack
Rostoks et al., PMPP, 2004
Mostly cytoplasmic, with a minor membrane association
Is a functionally active S/T kinase
pK1 pK2
1 837
catalytically
Inactive
catalytically
active
Both the domains required for disease resistance!!!!
Nirmala et al., PNAS, 2006
RPG1 Phosphorylation
5 min after spore
landing
Degradation
20-24hai
Highly race specific and required for
resistance!!!
Nirmala et al., 2007, PNAS Nirmala et al., 2010, MPMI
Elicitor is probably located on the
surface of the spore!!!
Background on stem rust and Rpg1
AvrRpg1 genes/proteins
RGD peptides and rust control
Summary/Speculations
Adhesion pad
Nirmala et al., 2011, PNAS
RGD peptide treated spores Untreated Spores
RGD: Arginine-Glycine-Aspartic acid
Untreated sporesRGD treated spores
9 hours after inoculation
Nirmala et al., 2011, PNAS
RGD treated
Spore
Untreated
Spores
P
U
0.25hai20hai
24
hai48
hai
PS
PT
RPG1
Morex
Steptoe
ASM170
Puccinia graminis f. sp. tritici
urediniospore extract binding to
and eluted from the RGD affinity
column induced RPG1
phosphorylation and degradation
in barley cv. Morex
Puccinia graminis f. sp. tritici
urediniospore extract binding to
and eluted from the RGD affinity
column induced HR in barley
harboring a functional Rpg1 gene
RGD: Arginine, Glycine
and Aspartic acidP: Positive control
U: Uninoculated control
PS: Phosphoserine antibody
PT: Phosphothreonine antibody
3
Fibronectin
Type III
domain
BRCA1 C-terminal
Domain
5
Cell surface
recognition and
attachment
Phosphopeptide binding,
Phosphorylation and
protein-protein interaction
1bp
2918 bp
Has no known recognition motifs or an obvious signal peptide!!!
VPS9 domain CUE
domain
5 3
Vacuolar
transport
Ubiquitination
Has no known recognition motifs or an obvious signal peptide!!!
RPG1
PS
PT
P U 0.25
hai
8
hai
20
hai
22
hai
24
hai
48
hai
PS: Phosphoserine Antibody, PT: Phosphothreonine, P: Positive
control, U: Uninoculated control and hai: hours after inoculation
RGD
RGDAlone
VPS9alone
RGDAlone
VPS9alone
RGD+VPS9
RGD+VPS9
Morex Steptoe
SOS-VPS9+MyrRGD
Negativecontrol
Positivecontrol
37C
0
25C
0
SD/GLU-UL SD/GLU-UL SD/GAL-UL
37C
0
Nirmala et al., PNAS, 2011
The RPG1 pK1 and pK2 mutants failed to interact with the RGD-binding
and the VPS9 proteins.
A
B C
Positive control
SOS-VPS9+Myr-RPG1
SOS-VPS9+Myr-pK1-RPG1
SOS-VPS9+pMyr-pK2-RPG1
SOS-RGD+Myr-RPG1
SOS-RGD+Myr-pK1-RPG1
SOS-RGD+Myr-pK2-RPG1
Negative control
SD/GLU-UL SD/GAL-ULSD/GLU-UL
25 C
0
37 C
0
37 C
0
91.8 kDa
196.2 kDa
4 5 6
206.9 kDa
91.8 kDa
1 2 3
Nirmala et al., 2011, PNAS
Race Disease
reaction
Spore Sporelings Haustoria Infected
tissue
Comments
MCCF Avirulent + + + + gene intact
SCCLc7a Avirulent + + + + gene intact
HKHJ Avirulent + + + + gene intact
92-MN-90 Virulent + + + + gene intact
(SNPS)
QCCJ Virulent + + + + gene intact
(SNPS)
Ug99 Virulent + + ? + gene (SNPS)
qRT-PCR, RNA seq data and Illumina microarray
Race Disease
reaction
Spore Sporelings Haustoria Infected
tissue
Comments
MCCF avirulent + + + + gene intact
SCCLc7A avirulent + + + + gene intact
HKHJ avirulent + + + + gene intact
92-MN-90 Virulent + + + + 3 alleles
SNPS
QCCJ Virulent + + + + 2 alleles
SNPS
UG99 virulent + + ? +
2 alleles
SNPS
qRT-PCR, RNA seq and Illumina microarray data
SCCLc7a MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60
MCCF MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60
HKHJ MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60
92-MN-90 MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60
QCCJ MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMAPTGYTLAHP 60
Ug99 MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60
***************************************************.********
SCCLc7a DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540
MCCF DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540
HKHJ DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540
92-MN-90 DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540
QCCJ EQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540
Ug99 DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540
.***********************************************************
SCCLc7a DKGAEEEAEPRSTHPTSSPPNNKLPGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600
MCCF DKGAEEEAEPRSTHPTSSPPNNKLPGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600
HKHJ DKGAEEEAEPRSTHPTSSPPNNKLPGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600
92-MN-90 DKGAEEEAEPRSTHPTSSPPNNKLSGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600
QCCJ DKGAEEEAEPRSTHPTSSPPNNKLSGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600
Ug99 DKGAEEEAEPRSTHPTSSPPNNKLSGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600
************************.***********************************
SCCLc7a EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKTIGENKPHANGGSSSEVFDEISI 720
MCCF EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKTIGENKPHANGGSSSEVFDEISI 720
HKHJ EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKTIGENKPHANGGSSSEVFDEISI 720
92-MN-90 EEKQDIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKIIGENKPHANGGSSSEVFDEISI 720
QCCJ EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKIIGENKPHANGGSSSEVFDEISI 720
Ug99 EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKIIGENKPHANGGSSSEVFDEISI 720
****:*******************************************************
SCCLc7a GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780
MCCF GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780
HKHJ GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780
92-MN-90 GSDSIQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780
QCCJ GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780
Ug99 GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780
****:*******************************************************
SCCLc7a LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818
MCCF LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818
HKHJ LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818
92-MN-90 LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818
QCCJ LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818
Ug99 LVHPNLHQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818
**************************************
Avr
Avr
Avr
Vir
Vir
Vir
Vir
Vir
Avr
Avr
Avr
Vir
Avr
Avr
Avr
Vir
Vir
Vir
Avr
Avr
Avr
Vir
Vir
Vir
Avr
Avr
Avr
Vir
Vir
Vir
Avr
Avr
Avr
Vir
Vir
Vir
SCCLc7a MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60
MCCF MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60
HKHJ MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60
QCCJ(D) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDH----- 60
QCCJ(F) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60
Ug99(F) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60
UG99(D) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDH----- 60
92MN90 (1) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60
92MN90 (2) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60
92MN90 (D) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDH----- 60
************************************************************
SCCLc7a EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGAGGEAGGTGGGGER 540
MCCF EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGAGGEAGGTGGGGER 540
HKHJ EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGAGGEAGGTGGGGER 540
QCCJ(D) ------------------------------------------------------------
QCCJ(F) EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGVGGEAGGTGGGGER 540
Ug99(F) EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGVGGEAGGTGGGGER 540
UG99(D) ------------------------------------------------------------
92MN90(1) EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGANSSNSNMGGVGGEAGGTGGGGER 540
92MN90(2) EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGVGGEAGGTGGGGER 540
92MN90(D) ------------------------------------------------------------
*************************************:********:*************
Avr
Avr
Avr
Vir
Vir
Vir
Vir
Vir
Vir
Vir
Avr
Avr
Avr
Vir
Vir
Vir
Vir
Vir
Vir
Vir
 Source	
   Phosphoryla/on	
   Degrada/on	
   Hypersensi/ve	
  
response	
  
QCCJ	
  RGD+	
  VPS9	
   _	
   _	
   _	
  
92MN90	
  RGD+VPS9-­‐1	
   _	
   _	
   _	
  
92MN90	
  RGD+	
  VPS9-­‐2	
   _	
   _	
   _	
  
Ug99	
  RGD+	
  VPS9	
   _	
   _	
   _	
  
MCCF	
  RGD+	
  QCCJ	
  VPS9	
   +	
   _	
   _	
  
MCCF	
  RGD+92MN90	
  
VPS9-­‐1	
  
+	
   _	
   _	
  
MCCF	
  RGD+	
  	
  92MN90	
  	
  
VPS9-­‐2	
  
+	
   _	
   _	
  
MCCF	
  RGD+	
  
Ug99	
  VPS9-­‐2	
  
+	
   _	
   _	
  
Race	
   Muta/on	
   RPG1	
  Phosphoryla/on	
  ac/vity	
  
MCCF	
   P565S	
   Looses	
  ac/vity	
  
MCCF	
   S52P	
   Looses	
  ac/vity	
  
MCCF	
   D481E	
   Looses	
  ac/vity	
  
MCCF	
   E665D	
   Looses	
  ac/vity	
  
MCCF	
   N725I	
   Looses	
  ac/vity	
  
MCCF	
   Q787H	
   Looses	
  ac/vity	
  
QCCJ	
   P52S	
   Does	
  not	
  regain	
  ac/vity	
  
QCCJ	
   E481D	
   Does	
  not	
  regain	
  ac/vity	
  
92MN90	
   I725N	
   Does	
  not	
  regain	
  ac/vity	
  
92MN90	
   D665E	
   Does	
  not	
  regain	
  ac/vity	
  
Ug99	
   H787Q	
   Does	
  not	
  regain	
  ac/vity	
  
QCCJ	
   S565P	
   Does	
  not	
  regain	
  ac/vity	
  
92MN90	
   S565P	
   Does	
  not	
  regain	
  ac/vity	
  
Ug99	
   S565P	
   Does	
  not	
  regain	
  ac/vity	
  
QCCJ	
   P52S,	
  E481D	
   Does	
  not	
  regain	
  ac/vity	
  
92MN90	
   I725N,	
  D665E	
   Does	
  not	
  regain	
  ac/vity	
  
Ug99	
  	
   H787Q,	
  S565P	
   Regains	
  ac/vity	
  
QCCJ	
   P52S,	
  E481D,	
  S565P	
   Regains	
  ac/vity	
  
92MN90	
   I725N,	
  D665E,	
  S565P	
   Regains	
  ac/vity	
  
Race	
   Muta/on	
   RPG1	
  degrada/on	
  
MCCF	
   A527V	
   Looses	
  ability	
  to	
  degrade	
  RPG1	
  
MCCF	
   S518N	
   Looses	
  ability	
  to	
  degrade	
  RPG1	
  	
  
QCCJ	
   V527A	
   Regains	
  Ability	
  to	
  degrade	
  RPG1	
  
Ug99	
   V527A	
   Regains	
  ability	
  to	
  degrade	
  RPG1	
  
92MN90-­‐2	
   V527A	
   Regains	
  ability	
  to	
  degrade	
  RPG1	
  
92MN90-­‐1	
   V527A	
   Does	
  not	
  regain	
  ability	
  to	
  degrade	
  RPG1	
  	
  
92MN90-­‐1	
   N518S	
   Does	
  not	
  regain	
  ability	
  to	
  degrade	
  RPG1	
  
92MN90-­‐1	
   V527A/N518S	
   Regains	
  ability	
  to	
  degrade	
  RPG1	
  	
  
RPG1 phosphorylation was induced with MCCF-RGD binding protein
Background on stem rust and Rpg1
AvrRpg1 genes
RGD peptides and rust control
Summary/Speculations
Stem rust Stripe rust Leaf rust
RGDTREATED!
UNTREATED!
RGDTREATED!
UNTREATED!
UNTREATED!
RGDTREATED!
Stem rust Stripe rust Leaf rust
RGDTREATED!
RGDTREATED!
RGDTREATED!
UNTREATED!
UNTREATED!
UNTREATED!
RKQQC
control
RKQQC +
stabilized RGD
RKQQC +
unstabilized RGD
RKQQC +
stabilization control
Background on stem rust and Rpg1
AvrRpg1 genes
RGD peptides and rust control
Summary/Speculations
Phosphorylation of RPG1 acts as the initial signal for
activating the defense response
Two novel effectors work together in activating RPG1
They are present on the surface of the spores and the
recognition probably occurs at the surface of the plant
cells
Mutational analysis reveals that single amino acid
substitutions alters effector recognition and activation
Stabilized RGD peptides can be exploited to control
rust
1)  RGD binding protein interacts with RPG1 and other
proteins at the cell membrane and RPG1 may act as a
receptor
2)  If so RPG1 might be a integrin like molecule mediating
inside-out signaling!
3)  RPG1 does not have a RGD motif in the right
orientation-therefore might need another protein/integrin
which acts as a receptor, which might phosphorylate
RPG1 and initiate defense signaling
4) Why are these avirulent forms retained if it is so
easy to change to virulence by mutation?
a) Do they serve some other function?
5) Exploit the stabilized RGD peptides to control
the rusts
Research was supported by National Research Initiative of the United
States Department of Agriculture Co-operative State Research,
Education, and Extension Service Grant No. 2007-35301-18205 and
National Institute of Food and Agriculture Grant No. 2010-65108-20568.
Durable rust resistance in wheat
Dr. Andris Kleinhofs
Dr. Diter Von Wettstein
Dr. Scot Hulbert
Dr. Xianming Chen
Dr. Brian Steffenson
Dr. Pablo Olivera
Dr. Mathew Rouse
Dr. Les Szabo

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Unraveling the Rpg1-mediated Stem Rust Resistance in Barley

  • 1.
  • 2. Background on stem rust and Rpg1 AvrRpg1 genes/proteins RGD peptides and rust control Summary/Speculations
  • 3. Stem, leaf sheaths, leaf blade, parts of the head Tearing of outer layers of plant tissue/ Shriveled grains 70-90% yield loss
  • 4.
  • 5. 70-90% crop loss in wheat and barley Devastated the Midwest barley crop
  • 6. Confers resistance to several races of Puccinia graminis f. sp. tritici Brueggeman et al., PNAS, 2002 Map based cloning from cultivar “Morex” pK1 pK2 1 837
  • 7. Morex GP GP/Rpg1T1 Horvath et al., PNAS 2003 GP: Golden Promise
  • 8. Expressed constitutively in all organs Expressed at higher levels in the leaf epidermis!!! Does not significantly modulate in response to pathogen attack Rostoks et al., PMPP, 2004
  • 9. Mostly cytoplasmic, with a minor membrane association Is a functionally active S/T kinase pK1 pK2 1 837 catalytically Inactive catalytically active Both the domains required for disease resistance!!!! Nirmala et al., PNAS, 2006
  • 10. RPG1 Phosphorylation 5 min after spore landing Degradation 20-24hai Highly race specific and required for resistance!!! Nirmala et al., 2007, PNAS Nirmala et al., 2010, MPMI Elicitor is probably located on the surface of the spore!!!
  • 11. Background on stem rust and Rpg1 AvrRpg1 genes/proteins RGD peptides and rust control Summary/Speculations
  • 12. Adhesion pad Nirmala et al., 2011, PNAS RGD peptide treated spores Untreated Spores RGD: Arginine-Glycine-Aspartic acid
  • 13. Untreated sporesRGD treated spores 9 hours after inoculation Nirmala et al., 2011, PNAS
  • 15. P U 0.25hai20hai 24 hai48 hai PS PT RPG1 Morex Steptoe ASM170 Puccinia graminis f. sp. tritici urediniospore extract binding to and eluted from the RGD affinity column induced RPG1 phosphorylation and degradation in barley cv. Morex Puccinia graminis f. sp. tritici urediniospore extract binding to and eluted from the RGD affinity column induced HR in barley harboring a functional Rpg1 gene RGD: Arginine, Glycine and Aspartic acidP: Positive control U: Uninoculated control PS: Phosphoserine antibody PT: Phosphothreonine antibody
  • 16. 3 Fibronectin Type III domain BRCA1 C-terminal Domain 5 Cell surface recognition and attachment Phosphopeptide binding, Phosphorylation and protein-protein interaction 1bp 2918 bp Has no known recognition motifs or an obvious signal peptide!!!
  • 17. VPS9 domain CUE domain 5 3 Vacuolar transport Ubiquitination Has no known recognition motifs or an obvious signal peptide!!!
  • 18. RPG1 PS PT P U 0.25 hai 8 hai 20 hai 22 hai 24 hai 48 hai PS: Phosphoserine Antibody, PT: Phosphothreonine, P: Positive control, U: Uninoculated control and hai: hours after inoculation
  • 21. The RPG1 pK1 and pK2 mutants failed to interact with the RGD-binding and the VPS9 proteins. A B C Positive control SOS-VPS9+Myr-RPG1 SOS-VPS9+Myr-pK1-RPG1 SOS-VPS9+pMyr-pK2-RPG1 SOS-RGD+Myr-RPG1 SOS-RGD+Myr-pK1-RPG1 SOS-RGD+Myr-pK2-RPG1 Negative control SD/GLU-UL SD/GAL-ULSD/GLU-UL 25 C 0 37 C 0 37 C 0 91.8 kDa 196.2 kDa 4 5 6 206.9 kDa 91.8 kDa 1 2 3 Nirmala et al., 2011, PNAS
  • 22. Race Disease reaction Spore Sporelings Haustoria Infected tissue Comments MCCF Avirulent + + + + gene intact SCCLc7a Avirulent + + + + gene intact HKHJ Avirulent + + + + gene intact 92-MN-90 Virulent + + + + gene intact (SNPS) QCCJ Virulent + + + + gene intact (SNPS) Ug99 Virulent + + ? + gene (SNPS) qRT-PCR, RNA seq data and Illumina microarray
  • 23. Race Disease reaction Spore Sporelings Haustoria Infected tissue Comments MCCF avirulent + + + + gene intact SCCLc7A avirulent + + + + gene intact HKHJ avirulent + + + + gene intact 92-MN-90 Virulent + + + + 3 alleles SNPS QCCJ Virulent + + + + 2 alleles SNPS UG99 virulent + + ? + 2 alleles SNPS qRT-PCR, RNA seq and Illumina microarray data
  • 24. SCCLc7a MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60 MCCF MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60 HKHJ MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60 92-MN-90 MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60 QCCJ MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMAPTGYTLAHP 60 Ug99 MTGSFGGKSGFEKAGLFTDSFHSPNFTGQFSGTGTDIEDLEDTIIILYLMASTGYTLAHP 60 ***************************************************.******** SCCLc7a DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540 MCCF DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540 HKHJ DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540 92-MN-90 DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540 QCCJ EQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540 Ug99 DQPHVPTPPKFSAALSDILKENVDSPAENDSSPSGHKPMEFPNPMSHILSDRPESTPNGD 540 .*********************************************************** SCCLc7a DKGAEEEAEPRSTHPTSSPPNNKLPGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600 MCCF DKGAEEEAEPRSTHPTSSPPNNKLPGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600 HKHJ DKGAEEEAEPRSTHPTSSPPNNKLPGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600 92-MN-90 DKGAEEEAEPRSTHPTSSPPNNKLSGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600 QCCJ DKGAEEEAEPRSTHPTSSPPNNKLSGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600 Ug99 DKGAEEEAEPRSTHPTSSPPNNKLSGQTSGLAEQSQPSRGIVDDGEDDPFSAASPTISNP 600 ************************.*********************************** SCCLc7a EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKTIGENKPHANGGSSSEVFDEISI 720 MCCF EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKTIGENKPHANGGSSSEVFDEISI 720 HKHJ EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKTIGENKPHANGGSSSEVFDEISI 720 92-MN-90 EEKQDIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKIIGENKPHANGGSSSEVFDEISI 720 QCCJ EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKIIGENKPHANGGSSSEVFDEISI 720 Ug99 EEKQEIPEVDRSVGRDQPAAPSPPSPTALDSLASPSKIIGENKPHANGGSSSEVFDEISI 720 ****:******************************************************* SCCLc7a GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780 MCCF GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780 HKHJ GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780 92-MN-90 GSDSIQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780 QCCJ GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780 Ug99 GSDSNQLPDDEDHEVSDSKGESGSGDTFFSTASVPLQPSHPDPTLHSDLIQPHNPALLSD 780 ****:******************************************************* SCCLc7a LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818 MCCF LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818 HKHJ LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818 92-MN-90 LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818 QCCJ LVHPNLQQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818 Ug99 LVHPNLHQQHQPTDLITSDLVEHSSPSSSPPPPNHLAD 818 ************************************** Avr Avr Avr Vir Vir Vir Vir Vir Avr Avr Avr Vir Avr Avr Avr Vir Vir Vir Avr Avr Avr Vir Vir Vir Avr Avr Avr Vir Vir Vir Avr Avr Avr Vir Vir Vir
  • 25. SCCLc7a MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60 MCCF MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60 HKHJ MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60 QCCJ(D) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDH----- 60 QCCJ(F) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60 Ug99(F) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60 UG99(D) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDH----- 60 92MN90 (1) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60 92MN90 (2) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDHSHTQQ 60 92MN90 (D) MSTATIQPTIEDHQQHQTPPLIDLELASPSLAEEQEQEQQEQQEPEQQQQNSVDH----- 60 ************************************************************ SCCLc7a EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGAGGEAGGTGGGGER 540 MCCF EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGAGGEAGGTGGGGER 540 HKHJ EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGAGGEAGGTGGGGER 540 QCCJ(D) ------------------------------------------------------------ QCCJ(F) EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGVGGEAGGTGGGGER 540 Ug99(F) EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGVGGEAGGTGGGGER 540 UG99(D) ------------------------------------------------------------ 92MN90(1) EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGANSSNSNMGGVGGEAGGTGGGGER 540 92MN90(2) EEFEYNVEQAIVSLPRSPVIENIKASSGGFSAFTQGASSSNSNMGGVGGEAGGTGGGGER 540 92MN90(D) ------------------------------------------------------------ *************************************:********:************* Avr Avr Avr Vir Vir Vir Vir Vir Vir Vir Avr Avr Avr Vir Vir Vir Vir Vir Vir Vir
  • 26.  Source   Phosphoryla/on   Degrada/on   Hypersensi/ve   response   QCCJ  RGD+  VPS9   _   _   _   92MN90  RGD+VPS9-­‐1   _   _   _   92MN90  RGD+  VPS9-­‐2   _   _   _   Ug99  RGD+  VPS9   _   _   _   MCCF  RGD+  QCCJ  VPS9   +   _   _   MCCF  RGD+92MN90   VPS9-­‐1   +   _   _   MCCF  RGD+    92MN90     VPS9-­‐2   +   _   _   MCCF  RGD+   Ug99  VPS9-­‐2   +   _   _  
  • 27. Race   Muta/on   RPG1  Phosphoryla/on  ac/vity   MCCF   P565S   Looses  ac/vity   MCCF   S52P   Looses  ac/vity   MCCF   D481E   Looses  ac/vity   MCCF   E665D   Looses  ac/vity   MCCF   N725I   Looses  ac/vity   MCCF   Q787H   Looses  ac/vity   QCCJ   P52S   Does  not  regain  ac/vity   QCCJ   E481D   Does  not  regain  ac/vity   92MN90   I725N   Does  not  regain  ac/vity   92MN90   D665E   Does  not  regain  ac/vity   Ug99   H787Q   Does  not  regain  ac/vity   QCCJ   S565P   Does  not  regain  ac/vity   92MN90   S565P   Does  not  regain  ac/vity   Ug99   S565P   Does  not  regain  ac/vity   QCCJ   P52S,  E481D   Does  not  regain  ac/vity   92MN90   I725N,  D665E   Does  not  regain  ac/vity   Ug99     H787Q,  S565P   Regains  ac/vity   QCCJ   P52S,  E481D,  S565P   Regains  ac/vity   92MN90   I725N,  D665E,  S565P   Regains  ac/vity  
  • 28. Race   Muta/on   RPG1  degrada/on   MCCF   A527V   Looses  ability  to  degrade  RPG1   MCCF   S518N   Looses  ability  to  degrade  RPG1     QCCJ   V527A   Regains  Ability  to  degrade  RPG1   Ug99   V527A   Regains  ability  to  degrade  RPG1   92MN90-­‐2   V527A   Regains  ability  to  degrade  RPG1   92MN90-­‐1   V527A   Does  not  regain  ability  to  degrade  RPG1     92MN90-­‐1   N518S   Does  not  regain  ability  to  degrade  RPG1   92MN90-­‐1   V527A/N518S   Regains  ability  to  degrade  RPG1     RPG1 phosphorylation was induced with MCCF-RGD binding protein
  • 29. Background on stem rust and Rpg1 AvrRpg1 genes RGD peptides and rust control Summary/Speculations
  • 30. Stem rust Stripe rust Leaf rust RGDTREATED! UNTREATED! RGDTREATED! UNTREATED! UNTREATED! RGDTREATED!
  • 31. Stem rust Stripe rust Leaf rust RGDTREATED! RGDTREATED! RGDTREATED! UNTREATED! UNTREATED! UNTREATED!
  • 32. RKQQC control RKQQC + stabilized RGD RKQQC + unstabilized RGD RKQQC + stabilization control
  • 33. Background on stem rust and Rpg1 AvrRpg1 genes RGD peptides and rust control Summary/Speculations
  • 34. Phosphorylation of RPG1 acts as the initial signal for activating the defense response Two novel effectors work together in activating RPG1 They are present on the surface of the spores and the recognition probably occurs at the surface of the plant cells Mutational analysis reveals that single amino acid substitutions alters effector recognition and activation Stabilized RGD peptides can be exploited to control rust
  • 35. 1)  RGD binding protein interacts with RPG1 and other proteins at the cell membrane and RPG1 may act as a receptor 2)  If so RPG1 might be a integrin like molecule mediating inside-out signaling! 3)  RPG1 does not have a RGD motif in the right orientation-therefore might need another protein/integrin which acts as a receptor, which might phosphorylate RPG1 and initiate defense signaling
  • 36. 4) Why are these avirulent forms retained if it is so easy to change to virulence by mutation? a) Do they serve some other function? 5) Exploit the stabilized RGD peptides to control the rusts
  • 37. Research was supported by National Research Initiative of the United States Department of Agriculture Co-operative State Research, Education, and Extension Service Grant No. 2007-35301-18205 and National Institute of Food and Agriculture Grant No. 2010-65108-20568. Durable rust resistance in wheat Dr. Andris Kleinhofs Dr. Diter Von Wettstein Dr. Scot Hulbert Dr. Xianming Chen Dr. Brian Steffenson Dr. Pablo Olivera Dr. Mathew Rouse Dr. Les Szabo