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Assoc Prof. Rebecca Ackermann
Department of Archaeology
Beattie Bldg, Rm 3.19
becky.ackermann@uct.ac.za




                      Archaeology
                                                                 Biogeography & Adaptation
                                                                 Overview of Humans/Primates
                                                                 Vision
  Linguistics Anthropology Socio Cultural
                           Socio-Cultural                        Bipedalism
                                                                  Bi d li
                                                                 Brains
                                                                 Skin
                                                                 Agriculture
                          Biology                                Domestication
                                                                 World Population Growth




      All readings are on Vula                           Remain at the ENGEO Building venue for the
                                                           first practical
      Practicals and supplemental materials for the
       practicals are also on Vula                        Practical 1 will run Th/F (May 3 & 4) in first
                                                                                  /
                                                           week and M/Tu (May 7 & 8) in second week

                                                          Bring a calculator




                                                                                                            1
   Practical 2 will run Th/F of the second week (May 10 & 11)                    Introduction
    and M/Tu of the third week (May 14 & 15)
                                                                                  Adaptation through natural selection
   Meet at the Pick-up / drop off area at the end of University
    Avenue South                                                                  What is a species?
                                                                                              p
   13h00 – 18h00
                                                                                  How does one species split into two?
                                                                                  Extinction
   Wear good shoes!!! Bring appropriate clothes (e.g. rain
    gear)!!!
   Bring something (e.g. clipboard) to write on
   Be sure to read background material AHEAD of time




   Biogeography = the study of the pattern of distribution of               (mutation, selection, gene flow, genetic drift)
    organisms (individuals, species, ecosystems) across space and
    through geological time
   Patterns of distribution of organisms across geographical areas
    can usually be explained through historical factors (e.g.
    speciation; extinction; continental drift; glaciation, variations in
         i i        i i           i      l d if l i i         i i     i
    sea level, river routes, habitat) in combination with geographic
    constraints (landmass areas and isolation) and the available
    energy supplies in the ecosystem
   Evolution (adaptation through natural selection) provides the
    key explanation for the pattern of distribution of organisms
    (i.e. the link between organismal variation and the
    climate/environment)
   Evolution = descent with modification (i.e. change through
    time)                                                                             fast                      slow




   Adaptation of plants and animals to their environment
    occurs through the process of natural selection                        Ship Naturalist
   Adaptation = a change of structure, form, or habits to fit
    different conditions, which increases fitness                          1831 1836:
                                                                           1831-1836: Voyage of the
   Adaptive traits = a trait with a current functional role in            Beagle
    the life history of an organism that is maintained and
    evolved by means of natural selection
                                                                           1859: On the Origin of
   Natural selection = preservation of favorable individual               Species by Means of Natural
    differences and variations and the destruction of those
    that are injurious                                                     Selection




                                                                                                                               2
3
Parallel between species morphology, behaviour,
    geography and adaptation (‘fit’) to environments
    (the foundation of biogeography!!)




   Demonstrated FACT of evolution (and defined                                                         Malay Archipelago:
    it as descent with modification)                                                                     1848-1862

                                                                                                        1857: “On the
   Offered explanatory mechanism (i.e. natural
                                                                                                         Tendency of Variation
    selection… survival and mortality KEY to this
                                                                                                         to Depart Indefinitely
    definition)
                                                                                                         from the Original Type”




    Heredity of most features                                    The peppered moth, Biston
    Heritable variation in the population                         betularia, occurs in two varieties,
                                                                   melanic and non-melanic
    Variation leads to differential rates in survival &
                                                                  Non-melanic form is virtually
     reproductive success among variations                         invisible against pale-coloured
                                                                                      pale coloured
    Differential survival and reproduction leads to change        backgrounds, vice versa for melanic
     in frequency of characters (e.g. populations will diverge     form.
     from one another)                                            Differential survival rates under
    If process goes on long enough, parent & daughter             environments of different colour.
                                                                  Prior to industrial revolution,
     species can no longer interbreed (e.g. they have become
                                                                   lighter form dominant - a survival
     too different)                                                advantage against lichen-covered
                                                                   trees.
ENVIRONMENTAL CONTEXT IS ESSENTIAL!!!




                                                                                                                                   4
   After the industrial revolution,
                                                                        more offspring of melanic form
                                                                        survive to reproduce.
                                                                       Relative frequency shift: before
                                                                        melanic = 5% after = 98%
                                                                           l i     5%, f         98%.
                                                                       Process occurred in just 40
                                                                        generations.
                                                                       Note that in this case natural
                                                                        selection does not create the forms,
                                                                        but rather edits the populations.
                                                                       Natural selection is ‘fine-tuning’
                                                                        populations to their physical
                                                                        environments.




                                                                                                               Daubentonia
                                                                                                               madagascariensis




      Xanthopan morganii praedicta     Angraecum sesquipedale




     Bergmann’s Rule                        Allen’s Rule

Correlates between latitude (climate) and body mass / limb length




                                                                                                                                  5
   Natural selection can act to create (or delete)       Species are uniform ‘types’ of organisms:
    forms (species) when viewed over deep                  biogeographers classify organisms as belonging to one
    (geological/evolutionary) time                         or other species.
                                                          There are many different ways of defining species
   Other evolutionary forces (mutation, drift, gene
                                                          In practice, species are generally recognised not solely
    flow) also play a role in creating new forms           (or even necessarily) by reproductive isolation, but by
                                                           some combination of factors such as morphology,
                                                           genetics, geographic proximity, and ecology, that
                                                           together make a species distinct even in the face of
                                                           gene flow.




                                                            Western Meadowlark                 Eastern Meadowlark




                                                       Modes of species change




                                                           anagenesis
                                                                                        cladogenesis




                                                                                                                      6
Tempo (pace/rate)                                                                                     Tempo + Mode



                                                                          time




                                                                                 gradual        gradual        punctuated         punctuated     stasis
Phyletic gradualism                  Punctuated equilibrium                      anagenesis     cladogenesis   anagenesis         cladogenesis
                                                                                                               phenotype




                                                                                    Speciation – e.g. diversification of lineages (lineage
                                                                                     splitting)

                                                                                    Most important type of speciation is allopatric speciation
                                                                                     (although you may also encounter the terms sympatric
                                                                                     and parapatric speciation).




                     Adaptive radiation




                                                                                                               Time 4
                                                                                                               Differentiation (speciation)
   Species becomes geographically divided by a barrier (continental
    drift, rifting, change in course of river, fire etc).
                                                                                                               Time 3
   Separate populations are reproductively isolated from each other.                                          Reproductive isolation
   Natural selection operates independently in each population and the
    N     l l i                i d d tl i          h     l i      d h
    populations gradually become adapted to their own unique
                                                                                                               Time 2
    environments (divergence also occurs through genetic drift).
                                                                                                               Physical barrier
   Reproductive isolation is initially imposed by the geographical
    constraints, but eventually populations diverge too much resulting
    in permanent barrier (different genomes, behaviours, etc).                                                 Time 1
                                                                                                               Original population
   Speciation is complete; one species has become two (or more).




                                                                                                                                                          7
   If speciation occurs all the time, there should be more
    species today than 10,000 years ago, and more then than
    there were 10 million years ago, right?
   No, because extinction is ubiquitous.
    No                        ubiquitous
   99% or all species that have ever existed on Earth have
    gone extinct.
   Some geological periods are characterised, or dominated,
    by extinction (e.g. end-Permian, end-Cretaceous).
   These are so-called mass extinction events




   Causes varied and sometimes controversial

   End-Permian event resulted in loss of 90% of all marine
    species - global warming may have been the culprit (a
    lesson?).

   End-Cretaceous (K-T) likely caused by asteroid impact.
    Loss of large proportion of reptiles (especially the       Chicxulub crater

    dinosaurs).

   Causal factors may have been climate change induced by
    impact: global cooling.




                         Sudden disappearance ~50Ka                   Climate?
                         Human-induced environmental                  14 genera disappear
                          change caused by burning                      before the first
                          p
                          practices
                                                                        Clovis point is
                         Drought-adapted flora with
                          palatable nutritious grasslands               found
                          became fire-adapted desert
                          scrub with low-nutrition
                          grasses
                         Stress and extinction of
                          megafauna




                                                                                              8
   Climate change (severe
                                                                                 droughts).
                                                                                Arrival of humans
                                                                                 (including overhunting,
                                                                                 introduction of alien
                                                                                 species, the use of
                                                                                 agricultural fires).
In the American South-West the dates for Clovis sites (~13Ka) coincide          Hypervirulent/hyperlethal
closely with the dates for the last appearance of the Shasta Ground Sloth.       disease




      Human-induced climate change, habitat change,
       and hunting are continuing to threaten megafauna
       worldwide




                                                                                                             9

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biogeography+and+adaptation

  • 1. 7 billion people Assoc Prof. Rebecca Ackermann Department of Archaeology Beattie Bldg, Rm 3.19 becky.ackermann@uct.ac.za Archaeology  Biogeography & Adaptation  Overview of Humans/Primates  Vision Linguistics Anthropology Socio Cultural Socio-Cultural  Bipedalism Bi d li  Brains  Skin  Agriculture Biology  Domestication  World Population Growth  All readings are on Vula  Remain at the ENGEO Building venue for the first practical  Practicals and supplemental materials for the practicals are also on Vula  Practical 1 will run Th/F (May 3 & 4) in first / week and M/Tu (May 7 & 8) in second week  Bring a calculator 1
  • 2. Practical 2 will run Th/F of the second week (May 10 & 11)  Introduction and M/Tu of the third week (May 14 & 15)  Adaptation through natural selection  Meet at the Pick-up / drop off area at the end of University Avenue South  What is a species? p  13h00 – 18h00  How does one species split into two?  Extinction  Wear good shoes!!! Bring appropriate clothes (e.g. rain gear)!!!  Bring something (e.g. clipboard) to write on  Be sure to read background material AHEAD of time  Biogeography = the study of the pattern of distribution of (mutation, selection, gene flow, genetic drift) organisms (individuals, species, ecosystems) across space and through geological time  Patterns of distribution of organisms across geographical areas can usually be explained through historical factors (e.g. speciation; extinction; continental drift; glaciation, variations in i i i i i l d if l i i i i i sea level, river routes, habitat) in combination with geographic constraints (landmass areas and isolation) and the available energy supplies in the ecosystem  Evolution (adaptation through natural selection) provides the key explanation for the pattern of distribution of organisms (i.e. the link between organismal variation and the climate/environment)  Evolution = descent with modification (i.e. change through time) fast slow  Adaptation of plants and animals to their environment occurs through the process of natural selection Ship Naturalist  Adaptation = a change of structure, form, or habits to fit different conditions, which increases fitness 1831 1836: 1831-1836: Voyage of the  Adaptive traits = a trait with a current functional role in Beagle the life history of an organism that is maintained and evolved by means of natural selection 1859: On the Origin of  Natural selection = preservation of favorable individual Species by Means of Natural differences and variations and the destruction of those that are injurious Selection 2
  • 3. 3
  • 4. Parallel between species morphology, behaviour, geography and adaptation (‘fit’) to environments (the foundation of biogeography!!)  Demonstrated FACT of evolution (and defined  Malay Archipelago: it as descent with modification) 1848-1862  1857: “On the  Offered explanatory mechanism (i.e. natural Tendency of Variation selection… survival and mortality KEY to this to Depart Indefinitely definition) from the Original Type”  Heredity of most features  The peppered moth, Biston  Heritable variation in the population betularia, occurs in two varieties, melanic and non-melanic  Variation leads to differential rates in survival &  Non-melanic form is virtually reproductive success among variations invisible against pale-coloured pale coloured  Differential survival and reproduction leads to change backgrounds, vice versa for melanic in frequency of characters (e.g. populations will diverge form. from one another)  Differential survival rates under  If process goes on long enough, parent & daughter environments of different colour.  Prior to industrial revolution, species can no longer interbreed (e.g. they have become lighter form dominant - a survival too different) advantage against lichen-covered trees. ENVIRONMENTAL CONTEXT IS ESSENTIAL!!! 4
  • 5. After the industrial revolution, more offspring of melanic form survive to reproduce.  Relative frequency shift: before melanic = 5% after = 98% l i 5%, f 98%.  Process occurred in just 40 generations.  Note that in this case natural selection does not create the forms, but rather edits the populations.  Natural selection is ‘fine-tuning’ populations to their physical environments. Daubentonia madagascariensis Xanthopan morganii praedicta Angraecum sesquipedale Bergmann’s Rule Allen’s Rule Correlates between latitude (climate) and body mass / limb length 5
  • 6. Natural selection can act to create (or delete)  Species are uniform ‘types’ of organisms: forms (species) when viewed over deep biogeographers classify organisms as belonging to one (geological/evolutionary) time or other species.  There are many different ways of defining species  Other evolutionary forces (mutation, drift, gene  In practice, species are generally recognised not solely flow) also play a role in creating new forms (or even necessarily) by reproductive isolation, but by some combination of factors such as morphology, genetics, geographic proximity, and ecology, that together make a species distinct even in the face of gene flow. Western Meadowlark Eastern Meadowlark Modes of species change anagenesis cladogenesis 6
  • 7. Tempo (pace/rate) Tempo + Mode time gradual gradual punctuated punctuated stasis Phyletic gradualism Punctuated equilibrium anagenesis cladogenesis anagenesis cladogenesis phenotype  Speciation – e.g. diversification of lineages (lineage splitting)  Most important type of speciation is allopatric speciation (although you may also encounter the terms sympatric and parapatric speciation). Adaptive radiation Time 4 Differentiation (speciation)  Species becomes geographically divided by a barrier (continental drift, rifting, change in course of river, fire etc). Time 3  Separate populations are reproductively isolated from each other. Reproductive isolation  Natural selection operates independently in each population and the N l l i i d d tl i h l i d h populations gradually become adapted to their own unique Time 2 environments (divergence also occurs through genetic drift). Physical barrier  Reproductive isolation is initially imposed by the geographical constraints, but eventually populations diverge too much resulting in permanent barrier (different genomes, behaviours, etc). Time 1 Original population  Speciation is complete; one species has become two (or more). 7
  • 8. If speciation occurs all the time, there should be more species today than 10,000 years ago, and more then than there were 10 million years ago, right?  No, because extinction is ubiquitous. No ubiquitous  99% or all species that have ever existed on Earth have gone extinct.  Some geological periods are characterised, or dominated, by extinction (e.g. end-Permian, end-Cretaceous).  These are so-called mass extinction events  Causes varied and sometimes controversial  End-Permian event resulted in loss of 90% of all marine species - global warming may have been the culprit (a lesson?).  End-Cretaceous (K-T) likely caused by asteroid impact. Loss of large proportion of reptiles (especially the Chicxulub crater dinosaurs).  Causal factors may have been climate change induced by impact: global cooling.  Sudden disappearance ~50Ka  Climate?  Human-induced environmental  14 genera disappear change caused by burning before the first p practices Clovis point is  Drought-adapted flora with palatable nutritious grasslands found became fire-adapted desert scrub with low-nutrition grasses  Stress and extinction of megafauna 8
  • 9. Climate change (severe droughts).  Arrival of humans (including overhunting, introduction of alien species, the use of agricultural fires). In the American South-West the dates for Clovis sites (~13Ka) coincide  Hypervirulent/hyperlethal closely with the dates for the last appearance of the Shasta Ground Sloth. disease  Human-induced climate change, habitat change, and hunting are continuing to threaten megafauna worldwide 9