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QUORUM SENSING
By: Ehsan Sepahi
 Bacterial processes such as biofilm
formation, virulence factor secretion,
bioluminescence, antibiotic production,
sporulation, and competence for DNA
uptake are often critical for survival
3
 However, these behaviors are seemingly
futile if performed by a single bacterium
acting alone. Yet, we know that bacteria
perform these tasks effectively.
4
 How do bacteria manage?
5
 We now understand that, through a
process called quorum sensing, bacteria
synchronously control gene expression in
response to changes in cell density and
species complexity.
6
 Quorum sensing allows bacteria to switch
between two distinct gene expression
programs:
7
 one that is favored at low-cell-density
(LCD) for individual, asocial behaviors
8
 another that is favored at high-cell-
density (HCD) for social, group behaviors
9
10
 The fundamental steps involved in
detecting and responding to fluctuations
in cell number are analogous in all known
quorum-sensing systems
11
 First, low molecular weight molecules
called autoinducers are synthesized
intracellularly
12
 Second, these molecules are either
passively released or actively secreted
outside of the cells
 As the number of cells in a population
increases, the extracellular concentration
of autoinducer likewise increases
13
 Third, when autoinducers accumulate
above the minimal threshold level
required for detection, cognate receptors
bind the autoinducers and trigger signal
transduction cascades that result in
population-wide changes in gene
expression.
14
15
 Thus, quorum sensing enables cells in a
population to function in unison and in so
doing, they carry out behaviors as a
collective
16
17
18
19
20
21
 Quorum Sensing in Gram-Negative
Bacteria
22
 The first described quorum-sensing
system is that of the bioluminescent
marine bacterium Vibrio fischeri
23
 it is considered the paradigm for quorum
sensing in most gram-negative bacteria
24
 V. fischeri colonizes the light organ of the
Hawaiian squid Euprymna scolopes
25
26
27
 In this organ, the bacteria grow to high
cell density and induce the expression of
genes required for bioluminescence
28
 bioluminescence
29
 The squid uses the light provided by the
bacteria for counterillumination to mask
its shadow and avoid predation
 The bacteria benefit because the light
organ is rich in nutrients and allows
proliferation in numbers unachievable in
seawater
30
 Two proteins, LuxI and LuxR, control
expression of the luciferase operon
(luxICDABE) required for light production
31
32
 LuxI is the autoinducer synthase, which
produces the acyl-homoserine lactone
(AHL) autoinducer 3OC6-homoserine
lactone
 LuxR is the cytoplasmic autoinducer
receptor/DNAbinding transcriptional
activator
33
 Following production, the AHL freely diffuses
in and out of the cell and increases in
concentration with increasing cell density
 When the signal reaches a critical, threshold
concentration, it is bound by LuxR and this
complex activates transcription of the operon
encoding luciferase
34
 LuxR-AHL complex also induces
expression of luxI because it is encoded in
the luciferase operon
 This creates a positive feedback loop that
causes the entire population to switch into
“quorum-sensing mode” and produce light
35
 A large number of other gram-negative
proteobacteria possess LuxIR-type
proteins and communicate with AHL
signals
36
 AHLs are composed of homoserine lactone
(HSL) rings carrying acyl chains of C4 to
C18 in length
 These differences are crucial for signaling
specificity
37
38
 Quorum Sensing in Gram-Positive
Bacteria
39
 Gram-positive bacteria communicate using
modified oligopeptides as signals and “two
component”- type membrane-bound sensor
histidine kinases as receptors
 Because peptides are impermeable to
biological membranes, secretion of quorum-
sensing peptides is usually mediated by
specialized transporters
40
 Signaling is mediated by a
phosphorylation cascade that influences
the activity of a DNA-binding
transcriptional regulatory protein termed
a response regulator.
41
42
 major difference between LuxIR-based
and oligopeptide-based quorum-sensing
systems is the location of the cognate
receptors; whereas the LuxR-type
receptors are cytoplasmic, the sensors for
oligopeptide autoinducers in Gram-
positive bacteria are membrane-bound
43
 Unlike Gram-negative bacterial AHLs,
Gram-positive peptide autoinducers are
not variations on a single core molecule.
44
45
 Streptomycetes are a diverse family of
gram-positive soil-dwelling bacteria
 Streptomycetes use γ –butyrolactones as
autoinducers and control morphological
differentiation and secondary metabolite
production via quorum sensing
46
47
 Their signals are intriguing because they are
structurally related to AHL autoinducers.
 However, there has not yet been any report
describing either cross-communication
between or cross-inhibition of streptomycetes
and Gram-negative bacteria that
communicate with AHLs.
48
 QUORUM-SENSING NETWORK
ARCHITECTURE
49
 1: Parallel Quorum-Sensing Circuits
50
 The first observation that bacteria could
communicate with multiple quorum-
sensing signals was in the quorum-
sensing system of the Gram negative,
bioluminescent marine bacterium Vibrio
harveyi
51
 The V. harveyi quorum-sensing system
consists of three autoinducers and three
cognate receptors functioning in parallel
to channel information into a shared
regulatory pathway.
52
 At low cell density, in the absence of
appreciable amounts of autoinducers, the
three sensors—LuxN, LuxQ, and CqsS—act as
kinases
 At high cell density, when the autoinducers
accumulate to the level required for
detection, the three sensors switch from
being kinases to being phosphatases and
drain phosphate from LuxO via LuxU
53
54
 This arrangement may allow the network
to function as a coincidence detector that
significantly activates or represses gene
expression only when all signals are
simultaneously present or absent
55
 2: Quorum-Sensing Circuits Arranged
in Series
56
 The P. aeruginosa quorum-sensing network
consists of two LuxIR circuits, termed LasIR
and RhlIR
 Microarray analyses of P. aeruginosa quorum-
sensing-controlled gene expression revealed
three classes of genes:
◦ genes that respond to only one autoinducer
◦ genes that respond to either autoinducer
◦ genes that require both autoinducers
simultaneously for activation
57
58
 The tandem network architecture indeed
produces a temporally ordered sequence
of gene expression that may be critical for
the ordering of early and late events in a
successful infection
59
 Competitive Quorum-Sensing Circuits
◦ The above quorum-sensing networks rely on
multiple signals acting synergistically. Other
quorum-sensing networks are arranged such
that the signals antagonize one another.
60
 Bacillus subtilis has two autoinducing
peptides functioning in a network
arrangement that allows B. subtilis to
commit to one of two mutually exclusive
lifestyles:
◦ competence (the ability to take up exogenous
DNA)
◦ sporulation
61
62
 QUORUM-SENSING REGULONS
◦ The advent of genomic profiling has shown that
quorum sensing, in many bacteria, controls
gene expression in a global manner.
 over 150 competence-regulated genes in
Streptococcus pneumoniae that were categorized
as early, late, delayed-induction, and repressed
 quorum sensing coordinates the control of a large
subset of genes comes from transcriptome
analyses of P. aeruginosa that identify 616 genes
as part of the regulon.
63
 INTERSPECIES COMMUNICATION
AMONG BACTERIA
◦ Quorum sensing allows bacteria to
communicate within and between species.
◦ This notion arose with the discovery and
studyof the autoinducer AI-2.
64
 luxS encoding the AI-2 synthase is present in
roughly half of all sequenced bacterial genomes.
 AI-2 production has been verified in a large
number of these species.
 AI-2 controls gene expression in a variety of
bacteria.
 Together, these findings have led to the
hypothesis that bacteria use AI-2 to
communicate between species.
65
Quorum Quenching
66
67
 QQ and Biotechnology
68
Your questions?
69
‫نیکوکاران‬ ‫موسسه‬‫شریف‬
www.sharifngo.com
70

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Quorum sensing

  • 1.
  • 3.  Bacterial processes such as biofilm formation, virulence factor secretion, bioluminescence, antibiotic production, sporulation, and competence for DNA uptake are often critical for survival 3
  • 4.  However, these behaviors are seemingly futile if performed by a single bacterium acting alone. Yet, we know that bacteria perform these tasks effectively. 4
  • 5.  How do bacteria manage? 5
  • 6.  We now understand that, through a process called quorum sensing, bacteria synchronously control gene expression in response to changes in cell density and species complexity. 6
  • 7.  Quorum sensing allows bacteria to switch between two distinct gene expression programs: 7
  • 8.  one that is favored at low-cell-density (LCD) for individual, asocial behaviors 8
  • 9.  another that is favored at high-cell- density (HCD) for social, group behaviors 9
  • 10. 10
  • 11.  The fundamental steps involved in detecting and responding to fluctuations in cell number are analogous in all known quorum-sensing systems 11
  • 12.  First, low molecular weight molecules called autoinducers are synthesized intracellularly 12
  • 13.  Second, these molecules are either passively released or actively secreted outside of the cells  As the number of cells in a population increases, the extracellular concentration of autoinducer likewise increases 13
  • 14.  Third, when autoinducers accumulate above the minimal threshold level required for detection, cognate receptors bind the autoinducers and trigger signal transduction cascades that result in population-wide changes in gene expression. 14
  • 15. 15
  • 16.  Thus, quorum sensing enables cells in a population to function in unison and in so doing, they carry out behaviors as a collective 16
  • 17. 17
  • 18. 18
  • 19. 19
  • 20. 20
  • 21. 21
  • 22.  Quorum Sensing in Gram-Negative Bacteria 22
  • 23.  The first described quorum-sensing system is that of the bioluminescent marine bacterium Vibrio fischeri 23
  • 24.  it is considered the paradigm for quorum sensing in most gram-negative bacteria 24
  • 25.  V. fischeri colonizes the light organ of the Hawaiian squid Euprymna scolopes 25
  • 26. 26
  • 27. 27
  • 28.  In this organ, the bacteria grow to high cell density and induce the expression of genes required for bioluminescence 28
  • 30.  The squid uses the light provided by the bacteria for counterillumination to mask its shadow and avoid predation  The bacteria benefit because the light organ is rich in nutrients and allows proliferation in numbers unachievable in seawater 30
  • 31.  Two proteins, LuxI and LuxR, control expression of the luciferase operon (luxICDABE) required for light production 31
  • 32. 32
  • 33.  LuxI is the autoinducer synthase, which produces the acyl-homoserine lactone (AHL) autoinducer 3OC6-homoserine lactone  LuxR is the cytoplasmic autoinducer receptor/DNAbinding transcriptional activator 33
  • 34.  Following production, the AHL freely diffuses in and out of the cell and increases in concentration with increasing cell density  When the signal reaches a critical, threshold concentration, it is bound by LuxR and this complex activates transcription of the operon encoding luciferase 34
  • 35.  LuxR-AHL complex also induces expression of luxI because it is encoded in the luciferase operon  This creates a positive feedback loop that causes the entire population to switch into “quorum-sensing mode” and produce light 35
  • 36.  A large number of other gram-negative proteobacteria possess LuxIR-type proteins and communicate with AHL signals 36
  • 37.  AHLs are composed of homoserine lactone (HSL) rings carrying acyl chains of C4 to C18 in length  These differences are crucial for signaling specificity 37
  • 38. 38
  • 39.  Quorum Sensing in Gram-Positive Bacteria 39
  • 40.  Gram-positive bacteria communicate using modified oligopeptides as signals and “two component”- type membrane-bound sensor histidine kinases as receptors  Because peptides are impermeable to biological membranes, secretion of quorum- sensing peptides is usually mediated by specialized transporters 40
  • 41.  Signaling is mediated by a phosphorylation cascade that influences the activity of a DNA-binding transcriptional regulatory protein termed a response regulator. 41
  • 42. 42
  • 43.  major difference between LuxIR-based and oligopeptide-based quorum-sensing systems is the location of the cognate receptors; whereas the LuxR-type receptors are cytoplasmic, the sensors for oligopeptide autoinducers in Gram- positive bacteria are membrane-bound 43
  • 44.  Unlike Gram-negative bacterial AHLs, Gram-positive peptide autoinducers are not variations on a single core molecule. 44
  • 45. 45
  • 46.  Streptomycetes are a diverse family of gram-positive soil-dwelling bacteria  Streptomycetes use γ –butyrolactones as autoinducers and control morphological differentiation and secondary metabolite production via quorum sensing 46
  • 47. 47
  • 48.  Their signals are intriguing because they are structurally related to AHL autoinducers.  However, there has not yet been any report describing either cross-communication between or cross-inhibition of streptomycetes and Gram-negative bacteria that communicate with AHLs. 48
  • 50.  1: Parallel Quorum-Sensing Circuits 50
  • 51.  The first observation that bacteria could communicate with multiple quorum- sensing signals was in the quorum- sensing system of the Gram negative, bioluminescent marine bacterium Vibrio harveyi 51
  • 52.  The V. harveyi quorum-sensing system consists of three autoinducers and three cognate receptors functioning in parallel to channel information into a shared regulatory pathway. 52
  • 53.  At low cell density, in the absence of appreciable amounts of autoinducers, the three sensors—LuxN, LuxQ, and CqsS—act as kinases  At high cell density, when the autoinducers accumulate to the level required for detection, the three sensors switch from being kinases to being phosphatases and drain phosphate from LuxO via LuxU 53
  • 54. 54
  • 55.  This arrangement may allow the network to function as a coincidence detector that significantly activates or represses gene expression only when all signals are simultaneously present or absent 55
  • 56.  2: Quorum-Sensing Circuits Arranged in Series 56
  • 57.  The P. aeruginosa quorum-sensing network consists of two LuxIR circuits, termed LasIR and RhlIR  Microarray analyses of P. aeruginosa quorum- sensing-controlled gene expression revealed three classes of genes: ◦ genes that respond to only one autoinducer ◦ genes that respond to either autoinducer ◦ genes that require both autoinducers simultaneously for activation 57
  • 58. 58
  • 59.  The tandem network architecture indeed produces a temporally ordered sequence of gene expression that may be critical for the ordering of early and late events in a successful infection 59
  • 60.  Competitive Quorum-Sensing Circuits ◦ The above quorum-sensing networks rely on multiple signals acting synergistically. Other quorum-sensing networks are arranged such that the signals antagonize one another. 60
  • 61.  Bacillus subtilis has two autoinducing peptides functioning in a network arrangement that allows B. subtilis to commit to one of two mutually exclusive lifestyles: ◦ competence (the ability to take up exogenous DNA) ◦ sporulation 61
  • 62. 62
  • 63.  QUORUM-SENSING REGULONS ◦ The advent of genomic profiling has shown that quorum sensing, in many bacteria, controls gene expression in a global manner.  over 150 competence-regulated genes in Streptococcus pneumoniae that were categorized as early, late, delayed-induction, and repressed  quorum sensing coordinates the control of a large subset of genes comes from transcriptome analyses of P. aeruginosa that identify 616 genes as part of the regulon. 63
  • 64.  INTERSPECIES COMMUNICATION AMONG BACTERIA ◦ Quorum sensing allows bacteria to communicate within and between species. ◦ This notion arose with the discovery and studyof the autoinducer AI-2. 64
  • 65.  luxS encoding the AI-2 synthase is present in roughly half of all sequenced bacterial genomes.  AI-2 production has been verified in a large number of these species.  AI-2 controls gene expression in a variety of bacteria.  Together, these findings have led to the hypothesis that bacteria use AI-2 to communicate between species. 65
  • 67. 67
  • 68.  QQ and Biotechnology 68