The EB-eye is an Apache Lucene-based search engine aimed at providing unified access to the EBI databases. The system generates indices using a condensed but meaningful subset of the original data and returns summary information and links to the original data as well as all EBI specific database cross-references

1. EB-eye - The EMBL-EBI search engine ISMB 2008 - Tuesday, July 22 Franck Valentin EMBL-EBI

11. Web services – Listing the domains > listDomains() … astd … ensembl emblcds embldeleted emblnew_ann_con emblnew_con emblnew_standard emblnew_wgs emblrelease_ann_con emblrelease_con emblrelease_standard emblrelease_wgs ensembl … List available domains (list only the leaves) String[] listDomains()

12. Web services – Number of results > getNumberOfResults(‘medline’, 'immunolog* nutrition') 6954 Get number of results for a simple query int getNumberOfResults(String domain, String query)

13. Web services – Get results ids > getResultsIds(‘uniprot’, ‘polymerase’, 0, 5) A2VB99_9VIRU Q86777_9CALI Q779J8_9VIRU Q8I944_9STIC Q8I945_9STIC List result IDs for a simple query String[] getResultsIds(String domain, String query) String[] getResultsIds(String domain, String query, int start, int size)

14. Web services – Get referenced domains > getDomainsReferencedInEntry(‘ensembl’, ‘cg2102’) embldeleted emblnew_ann_con emblnew_con emblnew_standard emblnew_wgs emblrelease_ann_con emblrelease_con emblrelease_standard emblrelease_wgs go taxonomy uniprot Get referenced domains in a domain or an entry String[] getDomainsReferencedInEntry(String domain, String entryId) String[] getDomainsReferencedInDomain(String domain)