Submit Search
Upload
A novel method for time-binning rates of continuous character evolution on a phylogeny
•
Download as PPTX, PDF
•
1 like
•
911 views
Graeme Lloyd
Follow
Education
Report
Share
Report
Share
1 of 32
Download now
Recommended
Tip-dating and cal3 are new methods that allow us to quantitatively infer the placement of fossil morphotaxa in ancestor-descendant sequences in phylogenies. Full abstract here: https://gsa.confex.com/gsa/2016AM/webprogram/Paper277591.html
GSA 2016 Talk: Inferring Ancestor-Descendant Relationships in the Fossil Reco...
GSA 2016 Talk: Inferring Ancestor-Descendant Relationships in the Fossil Reco...
David Bapst
My newest talk, given at Evolution 2013 in Snowbird!
Evolution 2013 Talk: The Impact of Time-Scaling Methons on Phylogenetic Compa...
Evolution 2013 Talk: The Impact of Time-Scaling Methons on Phylogenetic Compa...
David Bapst
Slides from talk at GSA meeting in Phoenix, AZ, September 2019.
A new approach to visualizing the topology space of all possible phylogenetic...
A new approach to visualizing the topology space of all possible phylogenetic...
Graeme Lloyd
PDU2 presentation
A novel metatree approach to generating large phylogenetic hypotheses of exti...
A novel metatree approach to generating large phylogenetic hypotheses of exti...
Graeme Lloyd
Talk given at ICVM 2016 in Washington DC
Measuring morphological diversity and tempo using discrete characters: advant...
Measuring morphological diversity and tempo using discrete characters: advant...
Graeme Lloyd
Talk given at Evolution (Austin, 2016).
Phylogenetic diversity through deep time: an exploration using Mesozoic dinos...
Phylogenetic diversity through deep time: an exploration using Mesozoic dinos...
Graeme Lloyd
Presentation at International Symposium on Early and Lower Vertebrates (Melbourne 2015).
Time-binning rates of continuous character evolution on a phylogeny: the orig...
Time-binning rates of continuous character evolution on a phylogeny: the orig...
Graeme Lloyd
SVP 2015 talk slides
Detecting phylogenetic signals of endemism and dispersal: the effects of Pang...
Detecting phylogenetic signals of endemism and dispersal: the effects of Pang...
Graeme Lloyd
Recommended
Tip-dating and cal3 are new methods that allow us to quantitatively infer the placement of fossil morphotaxa in ancestor-descendant sequences in phylogenies. Full abstract here: https://gsa.confex.com/gsa/2016AM/webprogram/Paper277591.html
GSA 2016 Talk: Inferring Ancestor-Descendant Relationships in the Fossil Reco...
GSA 2016 Talk: Inferring Ancestor-Descendant Relationships in the Fossil Reco...
David Bapst
My newest talk, given at Evolution 2013 in Snowbird!
Evolution 2013 Talk: The Impact of Time-Scaling Methons on Phylogenetic Compa...
Evolution 2013 Talk: The Impact of Time-Scaling Methons on Phylogenetic Compa...
David Bapst
Slides from talk at GSA meeting in Phoenix, AZ, September 2019.
A new approach to visualizing the topology space of all possible phylogenetic...
A new approach to visualizing the topology space of all possible phylogenetic...
Graeme Lloyd
PDU2 presentation
A novel metatree approach to generating large phylogenetic hypotheses of exti...
A novel metatree approach to generating large phylogenetic hypotheses of exti...
Graeme Lloyd
Talk given at ICVM 2016 in Washington DC
Measuring morphological diversity and tempo using discrete characters: advant...
Measuring morphological diversity and tempo using discrete characters: advant...
Graeme Lloyd
Talk given at Evolution (Austin, 2016).
Phylogenetic diversity through deep time: an exploration using Mesozoic dinos...
Phylogenetic diversity through deep time: an exploration using Mesozoic dinos...
Graeme Lloyd
Presentation at International Symposium on Early and Lower Vertebrates (Melbourne 2015).
Time-binning rates of continuous character evolution on a phylogeny: the orig...
Time-binning rates of continuous character evolution on a phylogeny: the orig...
Graeme Lloyd
SVP 2015 talk slides
Detecting phylogenetic signals of endemism and dispersal: the effects of Pang...
Detecting phylogenetic signals of endemism and dispersal: the effects of Pang...
Graeme Lloyd
Evolution 2015 (Sao Paulo, Brazil)
Generating new models for detecting phylogenetic signals of endemism and disp...
Generating new models for detecting phylogenetic signals of endemism and disp...
Graeme Lloyd
Automated generation of large phylogenies and a probabilistically time-scaled...
Automated generation of large phylogenies and a probabilistically time-scaled...
Graeme Lloyd
Slides from my talk at the Radiation-Extinction meeting (Linn. Soc., November 2014)
New methodologies for the use of cladistic-type matrices to measure morpholog...
New methodologies for the use of cladistic-type matrices to measure morpholog...
Graeme Lloyd
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
Graeme Lloyd
How does Evolutionary Distinctiveness change when we place fossils in the tree?
How does Evolutionary Distinctiveness change when we place fossils in the tree?
Graeme Lloyd
A new R package for automating cladistic ordination and the effects of phylog...
A new R package for automating cladistic ordination and the effects of phylog...
Graeme Lloyd
Claddis: a new R package for automating disparity analyses based on cladistic...
Claddis: a new R package for automating disparity analyses based on cladistic...
Graeme Lloyd
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Graeme Lloyd
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Graeme Lloyd
Are our estimates of palaeobiodiversity more apparent than real?
Are our estimates of palaeobiodiversity more apparent than real?
Graeme Lloyd
Are palaeobiodiversity patterns more apparent than real?
Are palaeobiodiversity patterns more apparent than real?
Graeme Lloyd
What the deep sea tells us about sampling biases in the fossil record
What the deep sea tells us about sampling biases in the fossil record
Graeme Lloyd
Is there a bias in deep sea diversity patterns?
Is there a bias in deep sea diversity patterns?
Graeme Lloyd
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Graeme Lloyd
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Graeme Lloyd
A new non-minimal algorithm for dating phylogenies of fossil taxa
A new non-minimal algorithm for dating phylogenies of fossil taxa
Graeme Lloyd
Confidence intervals on node age estimates in vertebrate phylogeny
Confidence intervals on node age estimates in vertebrate phylogeny
Graeme Lloyd
Effects of ancestral character estimation on methods for estimating rates of ...
Effects of ancestral character estimation on methods for estimating rates of ...
Graeme Lloyd
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Graeme Lloyd
400-million years of 'fishes': a survey of sampling biases based on the UK re...
400-million years of 'fishes': a survey of sampling biases based on the UK re...
Graeme Lloyd
MBA Sem 4 | Business Analytics [BA 4] | Previous Year Question Paper | Summer 2023 | Web and Social Media Analytics | Solved PYQ | By Jayanti Pande | ProNotesJRP
Web & Social Media Analytics Previous Year Question Paper.pdf
Web & Social Media Analytics Previous Year Question Paper.pdf
Jayanti Pande
In this webinar, nonprofits learned how to delve into the minds of funders, unveiling what they truly seek in qualified grant applicants, and tools for success. Learn more about the Grant Readiness Review service by Remy Consulting at TechSoup to help you gather, organize, and assess the strength of documents required for grant applications.
Grant Readiness 101 TechSoup and Remy Consulting
Grant Readiness 101 TechSoup and Remy Consulting
TechSoup
More Related Content
More from Graeme Lloyd
Evolution 2015 (Sao Paulo, Brazil)
Generating new models for detecting phylogenetic signals of endemism and disp...
Generating new models for detecting phylogenetic signals of endemism and disp...
Graeme Lloyd
Automated generation of large phylogenies and a probabilistically time-scaled...
Automated generation of large phylogenies and a probabilistically time-scaled...
Graeme Lloyd
Slides from my talk at the Radiation-Extinction meeting (Linn. Soc., November 2014)
New methodologies for the use of cladistic-type matrices to measure morpholog...
New methodologies for the use of cladistic-type matrices to measure morpholog...
Graeme Lloyd
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
Graeme Lloyd
How does Evolutionary Distinctiveness change when we place fossils in the tree?
How does Evolutionary Distinctiveness change when we place fossils in the tree?
Graeme Lloyd
A new R package for automating cladistic ordination and the effects of phylog...
A new R package for automating cladistic ordination and the effects of phylog...
Graeme Lloyd
Claddis: a new R package for automating disparity analyses based on cladistic...
Claddis: a new R package for automating disparity analyses based on cladistic...
Graeme Lloyd
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Graeme Lloyd
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Graeme Lloyd
Are our estimates of palaeobiodiversity more apparent than real?
Are our estimates of palaeobiodiversity more apparent than real?
Graeme Lloyd
Are palaeobiodiversity patterns more apparent than real?
Are palaeobiodiversity patterns more apparent than real?
Graeme Lloyd
What the deep sea tells us about sampling biases in the fossil record
What the deep sea tells us about sampling biases in the fossil record
Graeme Lloyd
Is there a bias in deep sea diversity patterns?
Is there a bias in deep sea diversity patterns?
Graeme Lloyd
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Graeme Lloyd
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Graeme Lloyd
A new non-minimal algorithm for dating phylogenies of fossil taxa
A new non-minimal algorithm for dating phylogenies of fossil taxa
Graeme Lloyd
Confidence intervals on node age estimates in vertebrate phylogeny
Confidence intervals on node age estimates in vertebrate phylogeny
Graeme Lloyd
Effects of ancestral character estimation on methods for estimating rates of ...
Effects of ancestral character estimation on methods for estimating rates of ...
Graeme Lloyd
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Graeme Lloyd
400-million years of 'fishes': a survey of sampling biases based on the UK re...
400-million years of 'fishes': a survey of sampling biases based on the UK re...
Graeme Lloyd
More from Graeme Lloyd
(20)
Generating new models for detecting phylogenetic signals of endemism and disp...
Generating new models for detecting phylogenetic signals of endemism and disp...
Automated generation of large phylogenies and a probabilistically time-scaled...
Automated generation of large phylogenies and a probabilistically time-scaled...
New methodologies for the use of cladistic-type matrices to measure morpholog...
New methodologies for the use of cladistic-type matrices to measure morpholog...
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
How does Evolutionary Distinctiveness change when we place fossils in the tree?
How does Evolutionary Distinctiveness change when we place fossils in the tree?
A new R package for automating cladistic ordination and the effects of phylog...
A new R package for automating cladistic ordination and the effects of phylog...
Claddis: a new R package for automating disparity analyses based on cladistic...
Claddis: a new R package for automating disparity analyses based on cladistic...
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Are our estimates of palaeobiodiversity more apparent than real?
Are our estimates of palaeobiodiversity more apparent than real?
Are palaeobiodiversity patterns more apparent than real?
Are palaeobiodiversity patterns more apparent than real?
What the deep sea tells us about sampling biases in the fossil record
What the deep sea tells us about sampling biases in the fossil record
Is there a bias in deep sea diversity patterns?
Is there a bias in deep sea diversity patterns?
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
A new non-minimal algorithm for dating phylogenies of fossil taxa
A new non-minimal algorithm for dating phylogenies of fossil taxa
Confidence intervals on node age estimates in vertebrate phylogeny
Confidence intervals on node age estimates in vertebrate phylogeny
Effects of ancestral character estimation on methods for estimating rates of ...
Effects of ancestral character estimation on methods for estimating rates of ...
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
400-million years of 'fishes': a survey of sampling biases based on the UK re...
400-million years of 'fishes': a survey of sampling biases based on the UK re...
Recently uploaded
MBA Sem 4 | Business Analytics [BA 4] | Previous Year Question Paper | Summer 2023 | Web and Social Media Analytics | Solved PYQ | By Jayanti Pande | ProNotesJRP
Web & Social Media Analytics Previous Year Question Paper.pdf
Web & Social Media Analytics Previous Year Question Paper.pdf
Jayanti Pande
In this webinar, nonprofits learned how to delve into the minds of funders, unveiling what they truly seek in qualified grant applicants, and tools for success. Learn more about the Grant Readiness Review service by Remy Consulting at TechSoup to help you gather, organize, and assess the strength of documents required for grant applications.
Grant Readiness 101 TechSoup and Remy Consulting
Grant Readiness 101 TechSoup and Remy Consulting
TechSoup
Pie
The basics of sentences session 3pptx.pptx
The basics of sentences session 3pptx.pptx
heathfieldcps1
God is a creative God Gen 1:1. All that He created was “good”, could also be translated “beautiful”. God created man in His own image Gen 1:27. Maths helps us discover the beauty that God has created in His world and, in turn, create beautiful designs to serve and enrich the lives of others.
Explore beautiful and ugly buildings. Mathematics helps us create beautiful d...
Explore beautiful and ugly buildings. Mathematics helps us create beautiful d...
christianmathematics
General Principles of Intellectual Property: Concepts of Intellectual Property (IP), Intellectual Property Protection (IPP), Intellectual Property Rights (IPR);
General Principles of Intellectual Property: Concepts of Intellectual Proper...
General Principles of Intellectual Property: Concepts of Intellectual Proper...
Poonam Aher Patil
process recording format
PROCESS RECORDING FORMAT.docx
PROCESS RECORDING FORMAT.docx
PoojaSen20
AAPI Month Slide Deck
Asian American Pacific Islander Month DDSD 2024.pptx
Asian American Pacific Islander Month DDSD 2024.pptx
David Douglas School District
SGK
1029-Danh muc Sach Giao Khoa khoi 6.pdf
1029-Danh muc Sach Giao Khoa khoi 6.pdf
QucHHunhnh
As Odoo is a comprehensive business management software suite, the Calendar view is a powerful tool used to visualize and manage events, tasks, meetings, deadlines and other time-sensitive activities across various modules such as CRM, Project management, HR modules and more. In this slide, we can just go through the the steps of creating a calendar view for a module in Odoo 17.
Advanced Views - Calendar View in Odoo 17
Advanced Views - Calendar View in Odoo 17
Celine George
Measures of Dispersion and Variability: Range, QD, AD and SD
Measures of Dispersion and Variability: Range, QD, AD and SD
Measures of Dispersion and Variability: Range, QD, AD and SD
Thiyagu K
How Bosna and Herzegovina prepares for CBAM
Key note speaker Neum_Admir Softic_ENG.pdf
Key note speaker Neum_Admir Softic_ENG.pdf
Admir Softic
Psychiatric Nursing History collection format
psychiatric nursing HISTORY COLLECTION .docx
psychiatric nursing HISTORY COLLECTION .docx
PoojaSen20
Mixin classes are helpful for developers to extend the models. Using these classes helps to modify fields, methods and other functionalities of models without directly changing the base models. This slide will show how to extend models using mixin classes in odoo 17.
Mixin Classes in Odoo 17 How to Extend Models Using Mixin Classes
Mixin Classes in Odoo 17 How to Extend Models Using Mixin Classes
Celine George
In Bachelor of Pharmacy course, Class- 1st year, sem-II Subject EVS having topic of Energy Resources under the point Natural Resources. Following Presentation contain total information about the energy resources like Introduction of energy resources, Non-renewable, Renewable Energy resources with examples as well as deep explanations of coal, oil, petroleum, solar energy , wind energy , Conservation of Natural resources etc. Students having deep knowledge about energy resources after studying this presentation.
Energy Resources. ( B. Pharmacy, 1st Year, Sem-II) Natural Resources
Energy Resources. ( B. Pharmacy, 1st Year, Sem-II) Natural Resources
Shubhangi Sonawane
test
Activity 01 - Artificial Culture (1).pdf
Activity 01 - Artificial Culture (1).pdf
ciinovamais
ICT Role in 21st Century Education & its Challenges •This presentation gives an overall view of education in 21st century and how it is facilitated by the integration of ICT. •It also gives a detailed explanation of the challenges faced in ICT-based education and further elaborates the strategies that can help in overcoming the challenges.
ICT Role in 21st Century Education & its Challenges.pptx
ICT Role in 21st Century Education & its Challenges.pptx
AreebaZafar22
In Bachelor of Pharmacy course, Class- 1st year, sem-II Subject EVS having topic of ECOLOGICAL SUCCESSION under the ECOSYSTEM point in this presentation points like ecological succession , types of ecological succession like primary and secondary explain with diagram. Students having deep knowledge about Ecological Succession after studying this presentation.
Ecological Succession. ( ECOSYSTEM, B. Pharmacy, 1st Year, Sem-II, Environmen...
Ecological Succession. ( ECOSYSTEM, B. Pharmacy, 1st Year, Sem-II, Environmen...
Shubhangi Sonawane
Foster students' wonder and curiosity about infinity. The "mathematical concepts of the infinite can do much to engage and propel our thinking about God” Bradley & Howell, p. 56.
This PowerPoint helps students to consider the concept of infinity.
This PowerPoint helps students to consider the concept of infinity.
christianmathematics
SGLG2024
Seal of Good Local Governance (SGLG) 2024Final.pptx
Seal of Good Local Governance (SGLG) 2024Final.pptx
negromaestrong
Students will get the knowledge of the following- meaning of the pricing, its importance, objectives, methods of pricing, factors affecting the price of products, An overview of DPCO (Drug Price Control Order) and NPPA (National Pharmaceutical Pricing Authority)
Unit-V; Pricing (Pharma Marketing Management).pptx
Unit-V; Pricing (Pharma Marketing Management).pptx
VishalSingh1417
Recently uploaded
(20)
Web & Social Media Analytics Previous Year Question Paper.pdf
Web & Social Media Analytics Previous Year Question Paper.pdf
Grant Readiness 101 TechSoup and Remy Consulting
Grant Readiness 101 TechSoup and Remy Consulting
The basics of sentences session 3pptx.pptx
The basics of sentences session 3pptx.pptx
Explore beautiful and ugly buildings. Mathematics helps us create beautiful d...
Explore beautiful and ugly buildings. Mathematics helps us create beautiful d...
General Principles of Intellectual Property: Concepts of Intellectual Proper...
General Principles of Intellectual Property: Concepts of Intellectual Proper...
PROCESS RECORDING FORMAT.docx
PROCESS RECORDING FORMAT.docx
Asian American Pacific Islander Month DDSD 2024.pptx
Asian American Pacific Islander Month DDSD 2024.pptx
1029-Danh muc Sach Giao Khoa khoi 6.pdf
1029-Danh muc Sach Giao Khoa khoi 6.pdf
Advanced Views - Calendar View in Odoo 17
Advanced Views - Calendar View in Odoo 17
Measures of Dispersion and Variability: Range, QD, AD and SD
Measures of Dispersion and Variability: Range, QD, AD and SD
Key note speaker Neum_Admir Softic_ENG.pdf
Key note speaker Neum_Admir Softic_ENG.pdf
psychiatric nursing HISTORY COLLECTION .docx
psychiatric nursing HISTORY COLLECTION .docx
Mixin Classes in Odoo 17 How to Extend Models Using Mixin Classes
Mixin Classes in Odoo 17 How to Extend Models Using Mixin Classes
Energy Resources. ( B. Pharmacy, 1st Year, Sem-II) Natural Resources
Energy Resources. ( B. Pharmacy, 1st Year, Sem-II) Natural Resources
Activity 01 - Artificial Culture (1).pdf
Activity 01 - Artificial Culture (1).pdf
ICT Role in 21st Century Education & its Challenges.pptx
ICT Role in 21st Century Education & its Challenges.pptx
Ecological Succession. ( ECOSYSTEM, B. Pharmacy, 1st Year, Sem-II, Environmen...
Ecological Succession. ( ECOSYSTEM, B. Pharmacy, 1st Year, Sem-II, Environmen...
This PowerPoint helps students to consider the concept of infinity.
This PowerPoint helps students to consider the concept of infinity.
Seal of Good Local Governance (SGLG) 2024Final.pptx
Seal of Good Local Governance (SGLG) 2024Final.pptx
Unit-V; Pricing (Pharma Marketing Management).pptx
Unit-V; Pricing (Pharma Marketing Management).pptx
A novel method for time-binning rates of continuous character evolution on a phylogeny
1.
A novel method
for time-binning rates of continuous character evolution on a phylogeny Graeme T. Lloyd and Matt Friedman
2.
Coming soon… Fossilworks Intensive
Workshop in Analytical Paleobiology June-July 2014 University of Macquarie, Sydney fossilworks.org
3.
Acknowledgements Chris Organ Graham Slater
4.
Phylogeny in macroevolution
5.
Variable-rate models Trait Early Burst Late
Burst Time
6.
Rate Continuous rates Time
7.
Rate Continuous rates Time
8.
Continuous rates Raia et
al. 2013
9.
Guts Harmon et al.
2008
10.
Method
11.
Method
12.
Method
13.
Method
14.
Method S1 S2 1 S3
15.
Data Anderson et al.
2013
16.
Data Anderson et al.
2013
17.
“Equal” time-scaling Share time
with preceding (non-zero length) branch Traditional approach first τ8 τ8 τ7 τ7 τ6 τ6 τ5 τ5 root age Ruta et al. 2006; Brusatte et al. 2008
18.
Probabilistic time-scaling τ6 τ5 τ4 τ3 τ2 τ1 τ0 Hedman 2010
19.
Probabilistic time-scaling τ6 τ5 τ4 τ3 τ2 τ1 τ0 Age (Ma) τ0 Hedman
2010
20.
“Equal” time-tree
21.
Probabilistic time-tree
22.
Rates “Equal” timetree
23.
Rates “Equal” timetree
24.
Rates “Equal” timetree Probablistic timetree
25.
“Equal” rates with
error
26.
Probabilistic rates with
error
27.
Model complexity S1 S2
28.
Change in mode Ornstein-Uhlenbeck Brownian Slater
2013
29.
Conclusions
30.
Conclusions
31.
Conclusions
32.
Conclusions
Download now