SlideShare une entreprise Scribd logo
1  sur  15
INTRODUCTION TO
SETIA PRAMANA
setia.pramana@stis.ac.id
WHAT IS R?
• A language and environment for statistical computing and
graphics.
• An integrated suite of software facilities for data manipulation,
calculation and graphical display.
• First appeared in 1996 by Prof. Ross Ihaka and Robert
Gentleman of the University of Auckland, NZ.
• GNU software -> Free. Similar like S language.
• open source, maintained and developed by a community of
developers.
R INCLUDES
• an effective data handling and storage facility,
• a suite of operators for calculations on arrays, in particular matrices,
• a large, coherent, integrated collection of intermediate tools for data
analysis,
• graphical facilities for data analysis and display either on-screen or
on hardcopy, and
• a well-developed, simple and effective programming language which
includes conditionals, loops, user-defined recursive functions and
input and output facilities.
http://www.r-
project.org/
WHY R?
• R is HOT !
WHY R?
• R is HOT !
• It's free, open source, powerful and highly extensible
• It is not only statistical software but also a language
• > 5000 add-on packages  lots of pre-prepared packages
(http://cran.r-project.org/web/packages/)
• With many applications http://cran.r-project.org/web/views/
• Access to powerful, cutting-edge analytics
WHY R?
• Flexible (complex or standard statistical practices, bayesian
modelling, GIS map building, building interactive web applications,
building interactive tests, etc. )
• We can make our own package and publish it
• Great Graphics and data visualization
• Can be used for High Performance Computer Clusters
• Well Supported by R Community (http://www.inside-r.org/r-
resources-web)
• And many more…..
BUT…..
• R has no warranty
• Command Line Interface : difficult for some users.
• Users must learn a new way of thinking about data and data
analysis sequence
• ….. I guess
COMPANIES USING R IN 2013
• The New York Times routinely uses R for interactive and print data
visualization.
• Google has more than 500 R users.
• The FDA supports the use of R for clinical trials of new drugs.
• The National Weather Service uses R to predict the extent of flooding events.
• Zillow uses R to model housing prices.
• The Consumer Financial Protection Bureau uses R and other open source
tools.
• Twitter uses R for data science applications on the Twitter database.
• FourSquare uses R to develop its recommendation engine.
• Facebook uses R to model all sorts of user behaviour.
B P S ?
R
• Download from CRAN.
• Command Line
Interface (for some is
nightmare, for others
advantages)
• Also provide Graphical
User Interface:
RCommander,
IsoGeneGUI, Shiny,
etc.
R STUDIO
• Download from
Rstudio.com
• Powerfull IDE
(Integrated
Development
Environment) for R.
R COMMANDER
• Rcommander.com
• Helpful for R beginner
• Install inside R
R LIBRARY/PACKAGES
R Base Packages
lme4
IsoGene
foreign
survival
zoo
I CONTRIBUTES TO THESE R PACKAGES
• IsoGene
• IsoGeneGUI
• nea
• neaGUI
• biclustGUI
• OCRME
• More detail: http://setiopramono.wordpress.com/r-programming/
PRACTICE TIME

Contenu connexe

Tendances

COVID - 19 DATA ANALYSIS USING PYTHON and Introduction to Data Science
COVID - 19 DATA ANALYSIS USING PYTHON and Introduction to Data ScienceCOVID - 19 DATA ANALYSIS USING PYTHON and Introduction to Data Science
COVID - 19 DATA ANALYSIS USING PYTHON and Introduction to Data ScienceVibhuti Mandral
 
Data and Donuts: Data organization
Data and Donuts: Data organizationData and Donuts: Data organization
Data and Donuts: Data organizationC. Tobin Magle
 
Data Science With Python | Python For Data Science | Python Data Science Cour...
Data Science With Python | Python For Data Science | Python Data Science Cour...Data Science With Python | Python For Data Science | Python Data Science Cour...
Data Science With Python | Python For Data Science | Python Data Science Cour...Simplilearn
 
Next generation of data scientist
Next generation of data scientistNext generation of data scientist
Next generation of data scientistTanujaSomvanshi1
 
Panda Provenance
Panda ProvenancePanda Provenance
Panda ProvenanceVlad Vega
 
AllegroGraph - Cognitive Probability Graph webcast
AllegroGraph - Cognitive Probability Graph webcastAllegroGraph - Cognitive Probability Graph webcast
AllegroGraph - Cognitive Probability Graph webcastFranz Inc. - AllegroGraph
 
Machine learning for java developers
Machine learning for java developersMachine learning for java developers
Machine learning for java developersNirmal Fernando
 
Introduction To Data Structures
Introduction To Data StructuresIntroduction To Data Structures
Introduction To Data StructuresSpotle.ai
 
Introduction to data pre-processing and cleaning
Introduction to data pre-processing and cleaning Introduction to data pre-processing and cleaning
Introduction to data pre-processing and cleaning Matteo Manca
 
Supervised Papers Classification on Large-Scale High-Dimensional Data with Ap...
Supervised Papers Classification on Large-Scale High-Dimensional Data with Ap...Supervised Papers Classification on Large-Scale High-Dimensional Data with Ap...
Supervised Papers Classification on Large-Scale High-Dimensional Data with Ap...Leonidas Akritidis
 
Using spreadsheets in the classroom
Using spreadsheets in the classroomUsing spreadsheets in the classroom
Using spreadsheets in the classroomPatricia McCauley
 
Michael Stonebraker How to do Complex Analytics
Michael Stonebraker How to do Complex AnalyticsMichael Stonebraker How to do Complex Analytics
Michael Stonebraker How to do Complex AnalyticsMassTLC
 
Machine Learning 101 | Essential Tools for Machine Learning
Machine Learning 101 | Essential Tools for Machine LearningMachine Learning 101 | Essential Tools for Machine Learning
Machine Learning 101 | Essential Tools for Machine LearningHafiz Muhammad Attaullah
 
Data legend dh_benelux_2017.key
Data legend dh_benelux_2017.keyData legend dh_benelux_2017.key
Data legend dh_benelux_2017.keyRichard Zijdeman
 

Tendances (19)

COVID - 19 DATA ANALYSIS USING PYTHON and Introduction to Data Science
COVID - 19 DATA ANALYSIS USING PYTHON and Introduction to Data ScienceCOVID - 19 DATA ANALYSIS USING PYTHON and Introduction to Data Science
COVID - 19 DATA ANALYSIS USING PYTHON and Introduction to Data Science
 
Data and Donuts: Data organization
Data and Donuts: Data organizationData and Donuts: Data organization
Data and Donuts: Data organization
 
Data Science With Python | Python For Data Science | Python Data Science Cour...
Data Science With Python | Python For Data Science | Python Data Science Cour...Data Science With Python | Python For Data Science | Python Data Science Cour...
Data Science With Python | Python For Data Science | Python Data Science Cour...
 
CVpro
CVproCVpro
CVpro
 
Next generation of data scientist
Next generation of data scientistNext generation of data scientist
Next generation of data scientist
 
Panda Provenance
Panda ProvenancePanda Provenance
Panda Provenance
 
Introduction Big data
Introduction Big data  Introduction Big data
Introduction Big data
 
AllegroGraph - Cognitive Probability Graph webcast
AllegroGraph - Cognitive Probability Graph webcastAllegroGraph - Cognitive Probability Graph webcast
AllegroGraph - Cognitive Probability Graph webcast
 
E05312426
E05312426E05312426
E05312426
 
Machine learning for java developers
Machine learning for java developersMachine learning for java developers
Machine learning for java developers
 
Introduction To Data Structures
Introduction To Data StructuresIntroduction To Data Structures
Introduction To Data Structures
 
Introduction to data pre-processing and cleaning
Introduction to data pre-processing and cleaning Introduction to data pre-processing and cleaning
Introduction to data pre-processing and cleaning
 
IR tutorial
IR tutorialIR tutorial
IR tutorial
 
Supervised Papers Classification on Large-Scale High-Dimensional Data with Ap...
Supervised Papers Classification on Large-Scale High-Dimensional Data with Ap...Supervised Papers Classification on Large-Scale High-Dimensional Data with Ap...
Supervised Papers Classification on Large-Scale High-Dimensional Data with Ap...
 
Using spreadsheets in the classroom
Using spreadsheets in the classroomUsing spreadsheets in the classroom
Using spreadsheets in the classroom
 
Michael Stonebraker How to do Complex Analytics
Michael Stonebraker How to do Complex AnalyticsMichael Stonebraker How to do Complex Analytics
Michael Stonebraker How to do Complex Analytics
 
Machine Learning 101 | Essential Tools for Machine Learning
Machine Learning 101 | Essential Tools for Machine LearningMachine Learning 101 | Essential Tools for Machine Learning
Machine Learning 101 | Essential Tools for Machine Learning
 
Data legend dh_benelux_2017.key
Data legend dh_benelux_2017.keyData legend dh_benelux_2017.key
Data legend dh_benelux_2017.key
 
Java ug
Java ugJava ug
Java ug
 

En vedette

Pengalaman Menjadi Mahasiswa Muslim di Eropa
Pengalaman Menjadi Mahasiswa Muslim di EropaPengalaman Menjadi Mahasiswa Muslim di Eropa
Pengalaman Menjadi Mahasiswa Muslim di EropaSetia Pramana
 
Getting a Scholarship, how?
Getting a Scholarship, how?Getting a Scholarship, how?
Getting a Scholarship, how?Setia Pramana
 
Multivariate data analysis
Multivariate data analysisMultivariate data analysis
Multivariate data analysisSetia Pramana
 
Mengapa kami (belum) mau pulang?
Mengapa kami (belum) mau pulang?Mengapa kami (belum) mau pulang?
Mengapa kami (belum) mau pulang?Setia Pramana
 
Kehidupan sehari-hari dengan Personnummer atau SIN Single Identity Number
Kehidupan sehari-hari dengan Personnummer atau SIN Single Identity NumberKehidupan sehari-hari dengan Personnummer atau SIN Single Identity Number
Kehidupan sehari-hari dengan Personnummer atau SIN Single Identity NumberSetia Pramana
 
Research Methods for Computational Statistics
Research Methods for Computational StatisticsResearch Methods for Computational Statistics
Research Methods for Computational StatisticsSetia Pramana
 
“Big Data” and the Challenges for Statisticians
“Big Data” and the  Challenges for Statisticians“Big Data” and the  Challenges for Statisticians
“Big Data” and the Challenges for StatisticiansSetia Pramana
 
Bioinformatics I-4 lecture
Bioinformatics I-4 lectureBioinformatics I-4 lecture
Bioinformatics I-4 lectureSetia Pramana
 
Molecular Subtyping of Breast Cancer and Somatic Mutation Discovery Using DNA...
Molecular Subtyping of Breast Cancer and Somatic Mutation Discovery Using DNA...Molecular Subtyping of Breast Cancer and Somatic Mutation Discovery Using DNA...
Molecular Subtyping of Breast Cancer and Somatic Mutation Discovery Using DNA...Setia Pramana
 
Correlation and Regression Analysis using SPSS and Microsoft Excel
Correlation and Regression Analysis using SPSS and Microsoft ExcelCorrelation and Regression Analysis using SPSS and Microsoft Excel
Correlation and Regression Analysis using SPSS and Microsoft ExcelSetia Pramana
 
Research possibilities with the Personal Identification Number (person nummer...
Research possibilities with the Personal Identification Number (person nummer...Research possibilities with the Personal Identification Number (person nummer...
Research possibilities with the Personal Identification Number (person nummer...Setia Pramana
 
Gene sebuah nikmat Allah
Gene sebuah nikmat AllahGene sebuah nikmat Allah
Gene sebuah nikmat AllahSetia Pramana
 
Developing R Graphical User Interfaces
Developing R Graphical User InterfacesDeveloping R Graphical User Interfaces
Developing R Graphical User InterfacesSetia Pramana
 
Survival Data Analysis for Sekolah Tinggi Ilmu Statistik Jakarta
Survival Data Analysis for Sekolah Tinggi Ilmu Statistik JakartaSurvival Data Analysis for Sekolah Tinggi Ilmu Statistik Jakarta
Survival Data Analysis for Sekolah Tinggi Ilmu Statistik JakartaSetia Pramana
 
Academia vs industry
Academia vs industryAcademia vs industry
Academia vs industrySetia Pramana
 
Metode numerik-buku-ajar-unila
Metode numerik-buku-ajar-unilaMetode numerik-buku-ajar-unila
Metode numerik-buku-ajar-unilatejowati
 

En vedette (18)

Pengalaman Menjadi Mahasiswa Muslim di Eropa
Pengalaman Menjadi Mahasiswa Muslim di EropaPengalaman Menjadi Mahasiswa Muslim di Eropa
Pengalaman Menjadi Mahasiswa Muslim di Eropa
 
Getting a Scholarship, how?
Getting a Scholarship, how?Getting a Scholarship, how?
Getting a Scholarship, how?
 
Multivariate data analysis
Multivariate data analysisMultivariate data analysis
Multivariate data analysis
 
Mengapa kami (belum) mau pulang?
Mengapa kami (belum) mau pulang?Mengapa kami (belum) mau pulang?
Mengapa kami (belum) mau pulang?
 
Kehidupan sehari-hari dengan Personnummer atau SIN Single Identity Number
Kehidupan sehari-hari dengan Personnummer atau SIN Single Identity NumberKehidupan sehari-hari dengan Personnummer atau SIN Single Identity Number
Kehidupan sehari-hari dengan Personnummer atau SIN Single Identity Number
 
Research Methods for Computational Statistics
Research Methods for Computational StatisticsResearch Methods for Computational Statistics
Research Methods for Computational Statistics
 
“Big Data” and the Challenges for Statisticians
“Big Data” and the  Challenges for Statisticians“Big Data” and the  Challenges for Statisticians
“Big Data” and the Challenges for Statisticians
 
Resampling methods
Resampling methodsResampling methods
Resampling methods
 
Bioinformatics I-4 lecture
Bioinformatics I-4 lectureBioinformatics I-4 lecture
Bioinformatics I-4 lecture
 
Molecular Subtyping of Breast Cancer and Somatic Mutation Discovery Using DNA...
Molecular Subtyping of Breast Cancer and Somatic Mutation Discovery Using DNA...Molecular Subtyping of Breast Cancer and Somatic Mutation Discovery Using DNA...
Molecular Subtyping of Breast Cancer and Somatic Mutation Discovery Using DNA...
 
Correlation and Regression Analysis using SPSS and Microsoft Excel
Correlation and Regression Analysis using SPSS and Microsoft ExcelCorrelation and Regression Analysis using SPSS and Microsoft Excel
Correlation and Regression Analysis using SPSS and Microsoft Excel
 
Research possibilities with the Personal Identification Number (person nummer...
Research possibilities with the Personal Identification Number (person nummer...Research possibilities with the Personal Identification Number (person nummer...
Research possibilities with the Personal Identification Number (person nummer...
 
Gene sebuah nikmat Allah
Gene sebuah nikmat AllahGene sebuah nikmat Allah
Gene sebuah nikmat Allah
 
Developing R Graphical User Interfaces
Developing R Graphical User InterfacesDeveloping R Graphical User Interfaces
Developing R Graphical User Interfaces
 
Survival Data Analysis for Sekolah Tinggi Ilmu Statistik Jakarta
Survival Data Analysis for Sekolah Tinggi Ilmu Statistik JakartaSurvival Data Analysis for Sekolah Tinggi Ilmu Statistik Jakarta
Survival Data Analysis for Sekolah Tinggi Ilmu Statistik Jakarta
 
Academia vs industry
Academia vs industryAcademia vs industry
Academia vs industry
 
Challenges and Opportunities for the Pharmaceutical Industry
Challenges and Opportunities for the Pharmaceutical IndustryChallenges and Opportunities for the Pharmaceutical Industry
Challenges and Opportunities for the Pharmaceutical Industry
 
Metode numerik-buku-ajar-unila
Metode numerik-buku-ajar-unilaMetode numerik-buku-ajar-unila
Metode numerik-buku-ajar-unila
 

Similaire à Introduction to R

BIG DATA ANALYTICS USING R
BIG DATA ANALYTICS USING  RBIG DATA ANALYTICS USING  R
BIG DATA ANALYTICS USING RUmair Shafique
 
The History and Use of R
The History and Use of RThe History and Use of R
The History and Use of RAnalyticsWeek
 
An introduction to R is a document useful
An introduction to R is a document usefulAn introduction to R is a document useful
An introduction to R is a document usefulssuser3c3f88
 
Big Data Analytics with R
Big Data Analytics with RBig Data Analytics with R
Big Data Analytics with RGreat Wide Open
 
Big Data Day LA 2016/ Big Data Track - Apply R in Enterprise Applications, Lo...
Big Data Day LA 2016/ Big Data Track - Apply R in Enterprise Applications, Lo...Big Data Day LA 2016/ Big Data Track - Apply R in Enterprise Applications, Lo...
Big Data Day LA 2016/ Big Data Track - Apply R in Enterprise Applications, Lo...Data Con LA
 
Know thy logos
Know thy logosKnow thy logos
Know thy logosVishal V
 
Big data analytics with R tool.pptx
Big data analytics with R tool.pptxBig data analytics with R tool.pptx
Big data analytics with R tool.pptxsalutiontechnology
 
R Programming Overview
R Programming Overview R Programming Overview
R Programming Overview dlamb3244
 
2 it unit-1 start learning r
2 it   unit-1 start learning r2 it   unit-1 start learning r
2 it unit-1 start learning rNetaji Gandi
 
lec1-Introduction.pptx
lec1-Introduction.pptxlec1-Introduction.pptx
lec1-Introduction.pptxAishaWaseem6
 
R as supporting tool for analytics and simulation
R as supporting tool for analytics and simulationR as supporting tool for analytics and simulation
R as supporting tool for analytics and simulationAlvaro Gil
 
R Vs Python – The most trending debate of aspiring Data Scientists
R Vs Python – The most trending debate of aspiring Data ScientistsR Vs Python – The most trending debate of aspiring Data Scientists
R Vs Python – The most trending debate of aspiring Data Scientistsabhishekdf3
 

Similaire à Introduction to R (20)

BIG DATA ANALYTICS USING R
BIG DATA ANALYTICS USING  RBIG DATA ANALYTICS USING  R
BIG DATA ANALYTICS USING R
 
The History and Use of R
The History and Use of RThe History and Use of R
The History and Use of R
 
An introduction to R is a document useful
An introduction to R is a document usefulAn introduction to R is a document useful
An introduction to R is a document useful
 
R introduction
R introductionR introduction
R introduction
 
Big Data Analytics with R
Big Data Analytics with RBig Data Analytics with R
Big Data Analytics with R
 
R programming
R programmingR programming
R programming
 
Big Data Day LA 2016/ Big Data Track - Apply R in Enterprise Applications, Lo...
Big Data Day LA 2016/ Big Data Track - Apply R in Enterprise Applications, Lo...Big Data Day LA 2016/ Big Data Track - Apply R in Enterprise Applications, Lo...
Big Data Day LA 2016/ Big Data Track - Apply R in Enterprise Applications, Lo...
 
LSESU a Taste of R Language Workshop
LSESU a Taste of R Language WorkshopLSESU a Taste of R Language Workshop
LSESU a Taste of R Language Workshop
 
Know thy logos
Know thy logosKnow thy logos
Know thy logos
 
Big data analytics with R tool.pptx
Big data analytics with R tool.pptxBig data analytics with R tool.pptx
Big data analytics with R tool.pptx
 
R Programming Overview
R Programming Overview R Programming Overview
R Programming Overview
 
R_L1-Aug-2022.pptx
R_L1-Aug-2022.pptxR_L1-Aug-2022.pptx
R_L1-Aug-2022.pptx
 
Data mining tools overall
Data mining tools overallData mining tools overall
Data mining tools overall
 
2 it unit-1 start learning r
2 it   unit-1 start learning r2 it   unit-1 start learning r
2 it unit-1 start learning r
 
UNIT-1 Start Learning R.pdf
UNIT-1 Start Learning R.pdfUNIT-1 Start Learning R.pdf
UNIT-1 Start Learning R.pdf
 
lec1-Introduction.pptx
lec1-Introduction.pptxlec1-Introduction.pptx
lec1-Introduction.pptx
 
R for data analytics
R for data analyticsR for data analytics
R for data analytics
 
R as supporting tool for analytics and simulation
R as supporting tool for analytics and simulationR as supporting tool for analytics and simulation
R as supporting tool for analytics and simulation
 
R programming
R programmingR programming
R programming
 
R Vs Python – The most trending debate of aspiring Data Scientists
R Vs Python – The most trending debate of aspiring Data ScientistsR Vs Python – The most trending debate of aspiring Data Scientists
R Vs Python – The most trending debate of aspiring Data Scientists
 

Plus de Setia Pramana

Big data for official statistics @ Konferensi Big Data Indonesia 2016
Big data for official statistics @ Konferensi Big Data Indonesia 2016 Big data for official statistics @ Konferensi Big Data Indonesia 2016
Big data for official statistics @ Konferensi Big Data Indonesia 2016 Setia Pramana
 
The Role of The Statisticians in Personalized Medicine: An Overview of Stati...
The Role of The Statisticians in Personalized Medicine:  An Overview of Stati...The Role of The Statisticians in Personalized Medicine:  An Overview of Stati...
The Role of The Statisticians in Personalized Medicine: An Overview of Stati...Setia Pramana
 
High throughput Data Analysis
High throughput Data AnalysisHigh throughput Data Analysis
High throughput Data AnalysisSetia Pramana
 
The Role of Statistician in Personalized Medicine: An Overview of Statistical...
The Role of Statistician in Personalized Medicine: An Overview of Statistical...The Role of Statistician in Personalized Medicine: An Overview of Statistical...
The Role of Statistician in Personalized Medicine: An Overview of Statistical...Setia Pramana
 
Model averaging in dose-response study in microarray expression
Model averaging in dose-response study in microarray expressionModel averaging in dose-response study in microarray expression
Model averaging in dose-response study in microarray expressionSetia Pramana
 
Dose-Response Modeling of Gene Expression Data in pre-clinical Microarray Exp...
Dose-Response Modeling of Gene Expression Data in pre-clinical Microarray Exp...Dose-Response Modeling of Gene Expression Data in pre-clinical Microarray Exp...
Dose-Response Modeling of Gene Expression Data in pre-clinical Microarray Exp...Setia Pramana
 
Classification using L1-Penalized Logistic Regression
Classification using L1-Penalized Logistic RegressionClassification using L1-Penalized Logistic Regression
Classification using L1-Penalized Logistic RegressionSetia Pramana
 
Biostatistics and Statistical Bioinformatics
Biostatistics and Statistical BioinformaticsBiostatistics and Statistical Bioinformatics
Biostatistics and Statistical BioinformaticsSetia Pramana
 
Gene expression introduction
Gene expression introductionGene expression introduction
Gene expression introductionSetia Pramana
 

Plus de Setia Pramana (10)

Big data for official statistics @ Konferensi Big Data Indonesia 2016
Big data for official statistics @ Konferensi Big Data Indonesia 2016 Big data for official statistics @ Konferensi Big Data Indonesia 2016
Big data for official statistics @ Konferensi Big Data Indonesia 2016
 
The Role of The Statisticians in Personalized Medicine: An Overview of Stati...
The Role of The Statisticians in Personalized Medicine:  An Overview of Stati...The Role of The Statisticians in Personalized Medicine:  An Overview of Stati...
The Role of The Statisticians in Personalized Medicine: An Overview of Stati...
 
High throughput Data Analysis
High throughput Data AnalysisHigh throughput Data Analysis
High throughput Data Analysis
 
The Role of Statistician in Personalized Medicine: An Overview of Statistical...
The Role of Statistician in Personalized Medicine: An Overview of Statistical...The Role of Statistician in Personalized Medicine: An Overview of Statistical...
The Role of Statistician in Personalized Medicine: An Overview of Statistical...
 
Model averaging in dose-response study in microarray expression
Model averaging in dose-response study in microarray expressionModel averaging in dose-response study in microarray expression
Model averaging in dose-response study in microarray expression
 
Dose-Response Modeling of Gene Expression Data in pre-clinical Microarray Exp...
Dose-Response Modeling of Gene Expression Data in pre-clinical Microarray Exp...Dose-Response Modeling of Gene Expression Data in pre-clinical Microarray Exp...
Dose-Response Modeling of Gene Expression Data in pre-clinical Microarray Exp...
 
IsoGeneGUI
IsoGeneGUIIsoGeneGUI
IsoGeneGUI
 
Classification using L1-Penalized Logistic Regression
Classification using L1-Penalized Logistic RegressionClassification using L1-Penalized Logistic Regression
Classification using L1-Penalized Logistic Regression
 
Biostatistics and Statistical Bioinformatics
Biostatistics and Statistical BioinformaticsBiostatistics and Statistical Bioinformatics
Biostatistics and Statistical Bioinformatics
 
Gene expression introduction
Gene expression introductionGene expression introduction
Gene expression introduction
 

Dernier

Transcript: New from BookNet Canada for 2024: Loan Stars - Tech Forum 2024
Transcript: New from BookNet Canada for 2024: Loan Stars - Tech Forum 2024Transcript: New from BookNet Canada for 2024: Loan Stars - Tech Forum 2024
Transcript: New from BookNet Canada for 2024: Loan Stars - Tech Forum 2024BookNet Canada
 
Testing tools and AI - ideas what to try with some tool examples
Testing tools and AI - ideas what to try with some tool examplesTesting tools and AI - ideas what to try with some tool examples
Testing tools and AI - ideas what to try with some tool examplesKari Kakkonen
 
UiPath Community: Communication Mining from Zero to Hero
UiPath Community: Communication Mining from Zero to HeroUiPath Community: Communication Mining from Zero to Hero
UiPath Community: Communication Mining from Zero to HeroUiPathCommunity
 
Generative Artificial Intelligence: How generative AI works.pdf
Generative Artificial Intelligence: How generative AI works.pdfGenerative Artificial Intelligence: How generative AI works.pdf
Generative Artificial Intelligence: How generative AI works.pdfIngrid Airi González
 
Passkey Providers and Enabling Portability: FIDO Paris Seminar.pptx
Passkey Providers and Enabling Portability: FIDO Paris Seminar.pptxPasskey Providers and Enabling Portability: FIDO Paris Seminar.pptx
Passkey Providers and Enabling Portability: FIDO Paris Seminar.pptxLoriGlavin3
 
How to Effectively Monitor SD-WAN and SASE Environments with ThousandEyes
How to Effectively Monitor SD-WAN and SASE Environments with ThousandEyesHow to Effectively Monitor SD-WAN and SASE Environments with ThousandEyes
How to Effectively Monitor SD-WAN and SASE Environments with ThousandEyesThousandEyes
 
Emixa Mendix Meetup 11 April 2024 about Mendix Native development
Emixa Mendix Meetup 11 April 2024 about Mendix Native developmentEmixa Mendix Meetup 11 April 2024 about Mendix Native development
Emixa Mendix Meetup 11 April 2024 about Mendix Native developmentPim van der Noll
 
A Framework for Development in the AI Age
A Framework for Development in the AI AgeA Framework for Development in the AI Age
A Framework for Development in the AI AgeCprime
 
Take control of your SAP testing with UiPath Test Suite
Take control of your SAP testing with UiPath Test SuiteTake control of your SAP testing with UiPath Test Suite
Take control of your SAP testing with UiPath Test SuiteDianaGray10
 
Genislab builds better products and faster go-to-market with Lean project man...
Genislab builds better products and faster go-to-market with Lean project man...Genislab builds better products and faster go-to-market with Lean project man...
Genislab builds better products and faster go-to-market with Lean project man...Farhan Tariq
 
Scale your database traffic with Read & Write split using MySQL Router
Scale your database traffic with Read & Write split using MySQL RouterScale your database traffic with Read & Write split using MySQL Router
Scale your database traffic with Read & Write split using MySQL RouterMydbops
 
The State of Passkeys with FIDO Alliance.pptx
The State of Passkeys with FIDO Alliance.pptxThe State of Passkeys with FIDO Alliance.pptx
The State of Passkeys with FIDO Alliance.pptxLoriGlavin3
 
Use of FIDO in the Payments and Identity Landscape: FIDO Paris Seminar.pptx
Use of FIDO in the Payments and Identity Landscape: FIDO Paris Seminar.pptxUse of FIDO in the Payments and Identity Landscape: FIDO Paris Seminar.pptx
Use of FIDO in the Payments and Identity Landscape: FIDO Paris Seminar.pptxLoriGlavin3
 
The Role of FIDO in a Cyber Secure Netherlands: FIDO Paris Seminar.pptx
The Role of FIDO in a Cyber Secure Netherlands: FIDO Paris Seminar.pptxThe Role of FIDO in a Cyber Secure Netherlands: FIDO Paris Seminar.pptx
The Role of FIDO in a Cyber Secure Netherlands: FIDO Paris Seminar.pptxLoriGlavin3
 
The Ultimate Guide to Choosing WordPress Pros and Cons
The Ultimate Guide to Choosing WordPress Pros and ConsThe Ultimate Guide to Choosing WordPress Pros and Cons
The Ultimate Guide to Choosing WordPress Pros and ConsPixlogix Infotech
 
[Webinar] SpiraTest - Setting New Standards in Quality Assurance
[Webinar] SpiraTest - Setting New Standards in Quality Assurance[Webinar] SpiraTest - Setting New Standards in Quality Assurance
[Webinar] SpiraTest - Setting New Standards in Quality AssuranceInflectra
 
The Future Roadmap for the Composable Data Stack - Wes McKinney - Data Counci...
The Future Roadmap for the Composable Data Stack - Wes McKinney - Data Counci...The Future Roadmap for the Composable Data Stack - Wes McKinney - Data Counci...
The Future Roadmap for the Composable Data Stack - Wes McKinney - Data Counci...Wes McKinney
 
A Deep Dive on Passkeys: FIDO Paris Seminar.pptx
A Deep Dive on Passkeys: FIDO Paris Seminar.pptxA Deep Dive on Passkeys: FIDO Paris Seminar.pptx
A Deep Dive on Passkeys: FIDO Paris Seminar.pptxLoriGlavin3
 
Merck Moving Beyond Passwords: FIDO Paris Seminar.pptx
Merck Moving Beyond Passwords: FIDO Paris Seminar.pptxMerck Moving Beyond Passwords: FIDO Paris Seminar.pptx
Merck Moving Beyond Passwords: FIDO Paris Seminar.pptxLoriGlavin3
 
DevEX - reference for building teams, processes, and platforms
DevEX - reference for building teams, processes, and platformsDevEX - reference for building teams, processes, and platforms
DevEX - reference for building teams, processes, and platformsSergiu Bodiu
 

Dernier (20)

Transcript: New from BookNet Canada for 2024: Loan Stars - Tech Forum 2024
Transcript: New from BookNet Canada for 2024: Loan Stars - Tech Forum 2024Transcript: New from BookNet Canada for 2024: Loan Stars - Tech Forum 2024
Transcript: New from BookNet Canada for 2024: Loan Stars - Tech Forum 2024
 
Testing tools and AI - ideas what to try with some tool examples
Testing tools and AI - ideas what to try with some tool examplesTesting tools and AI - ideas what to try with some tool examples
Testing tools and AI - ideas what to try with some tool examples
 
UiPath Community: Communication Mining from Zero to Hero
UiPath Community: Communication Mining from Zero to HeroUiPath Community: Communication Mining from Zero to Hero
UiPath Community: Communication Mining from Zero to Hero
 
Generative Artificial Intelligence: How generative AI works.pdf
Generative Artificial Intelligence: How generative AI works.pdfGenerative Artificial Intelligence: How generative AI works.pdf
Generative Artificial Intelligence: How generative AI works.pdf
 
Passkey Providers and Enabling Portability: FIDO Paris Seminar.pptx
Passkey Providers and Enabling Portability: FIDO Paris Seminar.pptxPasskey Providers and Enabling Portability: FIDO Paris Seminar.pptx
Passkey Providers and Enabling Portability: FIDO Paris Seminar.pptx
 
How to Effectively Monitor SD-WAN and SASE Environments with ThousandEyes
How to Effectively Monitor SD-WAN and SASE Environments with ThousandEyesHow to Effectively Monitor SD-WAN and SASE Environments with ThousandEyes
How to Effectively Monitor SD-WAN and SASE Environments with ThousandEyes
 
Emixa Mendix Meetup 11 April 2024 about Mendix Native development
Emixa Mendix Meetup 11 April 2024 about Mendix Native developmentEmixa Mendix Meetup 11 April 2024 about Mendix Native development
Emixa Mendix Meetup 11 April 2024 about Mendix Native development
 
A Framework for Development in the AI Age
A Framework for Development in the AI AgeA Framework for Development in the AI Age
A Framework for Development in the AI Age
 
Take control of your SAP testing with UiPath Test Suite
Take control of your SAP testing with UiPath Test SuiteTake control of your SAP testing with UiPath Test Suite
Take control of your SAP testing with UiPath Test Suite
 
Genislab builds better products and faster go-to-market with Lean project man...
Genislab builds better products and faster go-to-market with Lean project man...Genislab builds better products and faster go-to-market with Lean project man...
Genislab builds better products and faster go-to-market with Lean project man...
 
Scale your database traffic with Read & Write split using MySQL Router
Scale your database traffic with Read & Write split using MySQL RouterScale your database traffic with Read & Write split using MySQL Router
Scale your database traffic with Read & Write split using MySQL Router
 
The State of Passkeys with FIDO Alliance.pptx
The State of Passkeys with FIDO Alliance.pptxThe State of Passkeys with FIDO Alliance.pptx
The State of Passkeys with FIDO Alliance.pptx
 
Use of FIDO in the Payments and Identity Landscape: FIDO Paris Seminar.pptx
Use of FIDO in the Payments and Identity Landscape: FIDO Paris Seminar.pptxUse of FIDO in the Payments and Identity Landscape: FIDO Paris Seminar.pptx
Use of FIDO in the Payments and Identity Landscape: FIDO Paris Seminar.pptx
 
The Role of FIDO in a Cyber Secure Netherlands: FIDO Paris Seminar.pptx
The Role of FIDO in a Cyber Secure Netherlands: FIDO Paris Seminar.pptxThe Role of FIDO in a Cyber Secure Netherlands: FIDO Paris Seminar.pptx
The Role of FIDO in a Cyber Secure Netherlands: FIDO Paris Seminar.pptx
 
The Ultimate Guide to Choosing WordPress Pros and Cons
The Ultimate Guide to Choosing WordPress Pros and ConsThe Ultimate Guide to Choosing WordPress Pros and Cons
The Ultimate Guide to Choosing WordPress Pros and Cons
 
[Webinar] SpiraTest - Setting New Standards in Quality Assurance
[Webinar] SpiraTest - Setting New Standards in Quality Assurance[Webinar] SpiraTest - Setting New Standards in Quality Assurance
[Webinar] SpiraTest - Setting New Standards in Quality Assurance
 
The Future Roadmap for the Composable Data Stack - Wes McKinney - Data Counci...
The Future Roadmap for the Composable Data Stack - Wes McKinney - Data Counci...The Future Roadmap for the Composable Data Stack - Wes McKinney - Data Counci...
The Future Roadmap for the Composable Data Stack - Wes McKinney - Data Counci...
 
A Deep Dive on Passkeys: FIDO Paris Seminar.pptx
A Deep Dive on Passkeys: FIDO Paris Seminar.pptxA Deep Dive on Passkeys: FIDO Paris Seminar.pptx
A Deep Dive on Passkeys: FIDO Paris Seminar.pptx
 
Merck Moving Beyond Passwords: FIDO Paris Seminar.pptx
Merck Moving Beyond Passwords: FIDO Paris Seminar.pptxMerck Moving Beyond Passwords: FIDO Paris Seminar.pptx
Merck Moving Beyond Passwords: FIDO Paris Seminar.pptx
 
DevEX - reference for building teams, processes, and platforms
DevEX - reference for building teams, processes, and platformsDevEX - reference for building teams, processes, and platforms
DevEX - reference for building teams, processes, and platforms
 

Introduction to R

  • 2. WHAT IS R? • A language and environment for statistical computing and graphics. • An integrated suite of software facilities for data manipulation, calculation and graphical display. • First appeared in 1996 by Prof. Ross Ihaka and Robert Gentleman of the University of Auckland, NZ. • GNU software -> Free. Similar like S language. • open source, maintained and developed by a community of developers.
  • 3. R INCLUDES • an effective data handling and storage facility, • a suite of operators for calculations on arrays, in particular matrices, • a large, coherent, integrated collection of intermediate tools for data analysis, • graphical facilities for data analysis and display either on-screen or on hardcopy, and • a well-developed, simple and effective programming language which includes conditionals, loops, user-defined recursive functions and input and output facilities. http://www.r- project.org/
  • 4. WHY R? • R is HOT !
  • 5. WHY R? • R is HOT ! • It's free, open source, powerful and highly extensible • It is not only statistical software but also a language • > 5000 add-on packages  lots of pre-prepared packages (http://cran.r-project.org/web/packages/) • With many applications http://cran.r-project.org/web/views/ • Access to powerful, cutting-edge analytics
  • 6. WHY R? • Flexible (complex or standard statistical practices, bayesian modelling, GIS map building, building interactive web applications, building interactive tests, etc. ) • We can make our own package and publish it • Great Graphics and data visualization • Can be used for High Performance Computer Clusters • Well Supported by R Community (http://www.inside-r.org/r- resources-web) • And many more…..
  • 7. BUT….. • R has no warranty • Command Line Interface : difficult for some users. • Users must learn a new way of thinking about data and data analysis sequence • ….. I guess
  • 8. COMPANIES USING R IN 2013 • The New York Times routinely uses R for interactive and print data visualization. • Google has more than 500 R users. • The FDA supports the use of R for clinical trials of new drugs. • The National Weather Service uses R to predict the extent of flooding events. • Zillow uses R to model housing prices. • The Consumer Financial Protection Bureau uses R and other open source tools. • Twitter uses R for data science applications on the Twitter database. • FourSquare uses R to develop its recommendation engine. • Facebook uses R to model all sorts of user behaviour.
  • 9. B P S ?
  • 10. R • Download from CRAN. • Command Line Interface (for some is nightmare, for others advantages) • Also provide Graphical User Interface: RCommander, IsoGeneGUI, Shiny, etc.
  • 11. R STUDIO • Download from Rstudio.com • Powerfull IDE (Integrated Development Environment) for R.
  • 12. R COMMANDER • Rcommander.com • Helpful for R beginner • Install inside R
  • 13. R LIBRARY/PACKAGES R Base Packages lme4 IsoGene foreign survival zoo
  • 14. I CONTRIBUTES TO THESE R PACKAGES • IsoGene • IsoGeneGUI • nea • neaGUI • biclustGUI • OCRME • More detail: http://setiopramono.wordpress.com/r-programming/