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Inter Tribal Council of Arizona, Inc.
    Tribal Epidemiology Center
            TEC Director
     Jamie Ritchey, MPH, PhD
           August 7, 2012
Objectives

• Overview of Inter Tribal Council of
  Arizona (ITCA), Inc. Tribal Epidemiology
  Center (TEC)

• Epidemiology Basics

• Practical Applications of Epidemiology
Overview of Inter Tribal
Council of Arizona, Inc. (ITCA)
Tribal Epidemiology Center (TEC)
Tribal Epidemiology Center

• Who we are

• Where we are

• What services are provided

• How to request services and partnerships
Tribal Epidemiology Center
ITCA, Inc. Regional Epidemiology Center:
• Established in 1996

• Mission: Empowering the American Indian Tribes in
  Arizona, Nevada, and Utah in the further development
  of health services and systems

• Purpose: To support Tribally-driven Health Surveillance
  Systems that can assess both individual and community
  health status, facilitate planning, and manage existing
  health services
Tribal Epidemiology Center
Tribal Epidemiology Center
• Services
  – Community health profile (CHP) assistance
  – Epidemiology and other public health trainings
  – Study and survey design
  – Data collection and analysis
  – Technical report creation and review
  – Educational materials for health-related topics
  – Coordination of services during outbreaks or disease
    cluster investigations
  – CHP and Community Health Accreditation (CHA) tool kits
    for Tribes coming soon!
Tribal Epidemiology Center
• How can I request ITCA, Inc. TEC services?
  – E-mail ITCA, Inc. TEC for assistance directly at:
    TECinfo@itcaonline.com

  – TEC staff will respond within 48 hours and provide you with a fillable
    form to complete

  – TEC staff will meet with you by phone or e-mail to discuss a project
    work plan

  – TEC staff will decide with you the format and delivery method of the
    final product1
  1Please allow at least 2 weeks for project completion, possibly longer depending on the
  scope of the project
Epidemiology Basics
Epidemiology Basics

• Epidemiology
  – Definition
  – How public health professionals use it
• Types of Epidemiology
• Descriptive Epidemiology
  – Person, place, time
  – Measures
  – Relationship between measures
Epidemiology Basics
   Epidemiology is defined as:

   “…the study of the distribution and determinants
   of health-related states or events in specified
   populations and the application of this study to
   control of health problems.”1




1 Gordis, L. Modern Epidemiology 2nd Edition. 2000. W.B. Saunders Company, Philadelphia.
ISBN 0-7216-8338-X
Epidemiology Basics
• It enables public health professionals
  to:
  – Understand the local disease patterns
  – Identify populations at risk for disease
  – Establish associations with risk factors and
    disease
  – Determine causes of disease
  – Develop new prevention programs and
    policies
  – Set health-based standards
Epidemiology Basics
• Descriptive epidemiology1
    – Person, place, time
    – Measures: counts, proportions, rates
    – Explains or quantifies a particular disease or problem
      (ex. Cancer rates)
• Analytic epidemiology
    – Tests a hypothesis
    – Measures: relative risk, odds ratios
    – Describes associations between a risk factor and a
      disease (ex. Smoking and lung cancer relationship)

1Focus   for today’s talk
Epidemiology Basics
• Person
  – Ex. Diagnosed
    Colorectal cancer
    cases


• Place
  – Arizona
    Community Health
    Analysis Areas


• Time
  – 1995-2000
  – 2001-2004
Epidemiology Basics
• Uses statistical measures to describe:

  – New cases of disease and death

  – People living with disease

  – Identify possible risk factors for the disease
Epidemiology Basics

• Counts / Frequency
The number of events (“cases”) that occur
in a population of interest
  – Example: There were 87 cancer cases in
    Tribe A
    • Is this story complete?
    • What else would you like to know?
Epidemiology Basics

• Proportions give a magnitude to events
• Useful info might include:
  – Time
    • 87 cancer cases in 1 year (1999)
  – Total Number of Deaths
    • 87 cancer deaths/1,000 total deaths = 0.087
    • Multiply by 100%  0.087 x 100% =
    8.7% of deaths were cancer cases in 1999
Epidemiology Basics

Types of Rates
• Crude rates
• Stratified or Specific Rates
  – Better detail
  – Uses specific population (age group, sex,
    ethnic group, etc.)
  – Ex. Cancer death rates in males & females
• Adjusted rates
  – age
Epidemiology Basics

• Proportions
  – Prevalence (NOT a rate)
  – Not directly comparable across groups
  – Used for public health planning purposes to
    determine the burden of disease
• Rates
  – Incidence and Mortality rates
  – Allow health comparisons within and between groups
Epidemiology Basics
             • Incidence rate: Risk of
               disease development in
               the population (new
               cases)

             • Prevalence: Fraction of
               population with illness in
               population

             • Mortality rate: Risk of
               Death

             • Incidence and prevalence
               are related:
                   I X P = Duration
Epidemiology Basics
• How do epidemiologists know when rates
  are statistically different?
There are measures that can determine if
  differences are statistically significant…
  – P-values of p<0.05 indicate that measures have a statistically
    significant difference

  – 95% Confidence intervals that do not overlap are considered a
    way to tell if measures show a statistically significant
    difference. These intervals can also tell us about the
    magnitude of the difference.
Epidemiology Basics



 Statistical measures are used to tell a
story…but where do I get data to tell it?
Practical Applications
   of Epidemiology
Practical Applications of
      Epidemiology

• Arizona Cancer Registry

• Statistics for working documents
  – Scenarios
Arizona Cancer Registry
• Began in 1981

• Mandatory cancer reporting in
  1988 Arizona Revised Statute §36-133

• Rules for case reporting in 1992
   Arizona Administrative Code Title 9,
   Chapter 4

• Provide data to New Mexico
  Tumor Registry for American
  Indian registry for SEER
  statistics

• Population-based NPCR registry:
                                          Arizona Cancer Registry Home page:
    – Cancer site
                                          http://www.azdhs.gov/phs/phstats/acr/
    – Case demographics
    – Year of cancer diagnosis
Arizona Cancer Registry

  What statistical measures are available?
  • Cancer case counts
  • Cancer incidence rates1
  • Cancer mortality rates2
  • Population estimates
      – Denominator data


1Age-adjusted   incidence rates; 2Crude mortality rates per 100,000
Statistics for working
                     documents
     Scenario 1. A Tribal community cancer researcher has heard rumors
     from concerned community members that there may be a high risk of
     colorectal cancer in her area. From her training, she remembers that
     the national trend of age-adjusted incidence rate of colorectal
     cancers from 1992-2009 were dropping in the US1. She wants to
     determine if her community has a high risk of colorectal cancer
     compared to others.

     • What are the person, place, and time components?
     • What measure is needed to determine risk and can be directly
       compared across geographical areas?
     • How can I get this information from the Arizona cancer registry?


1   Age-adjusted colorectal cancer incidence rate trend slides from SEER are included in the presentation.
Statistics for working
                                documents
       What data does the researcher need?

       • Person
                – Colorectal cancer cases among AZ residents and Tribal
                  community members


       • Place
                – Arizona state in community health analysis areas (CHAAs)1

       • Time
                – Not specified
                – Data lag, limited to what is available2
1Tribespecific data is not publicly available. Community Health Analysis Areas are used to estimate
Incidence rates based on Census blocks in Tribal areas and may include non-Tribal members.
2Cancer data takes at least 18 months to check for completeness from the central registry.
http://azdhs.gov/phs/azchaa/CHAA_FAQ.pdf
Statistics for working
                   documents
 What statistics do we use to determine the
 risk of colorectal cancer comparing areas?

 Use age-adjusted incidence rates:
 • Risk of getting disease
 • Comparisons of groups


 Use 95% confidence intervals:
 • Rate differences are statistically significant
 • Magnitude of the difference
 • Stability of the rates1

1Rates   may be unreliable with small numbers of cases. The 95% CIs will often be a wide range.
Statistics for working
documents
Statistics for working
          documents
Three ways to get the
state data:
• From the home page, go
  to the Cancer Data Query
  System link

• Contact the Arizona
  Cancer Registry Data
  Section by e-mail or
  phone

• Request services from      http://www.azdhs.gov/phs/phstats/acr/
  TEC
Statistics for working
                documents
The Cancer Data
Query System,
incidence rates can be
access in two ways:
         – Age-adjusted cancer
         Incidence rates

         – ACR Community
           Health Analysis Area
           Maps1
1Tribespecific data is not publicly available. Community Health Analysis Areas are used to estimate
Incidence rates based on Census blocks in Tribal areas and may include non-Tribal members.
Statistics for working
            documents
Incidence rates and 95%
Confidence Intervals:

   –   For AZ
   –   By Year
   –   All race/ethnicity
   –   AI/ANs
Statistics for working
                            documents
AZ colorectal cancer age-adjusted
incidence rates show a decreasing
trend from 1995-2009 for both males
and females1

•    The age-adjusted incidence rate of
     colorectal cancer in 1995 for AZ
     men was 57.8 per 100,000 (95% CI:
     54.2-61.4) and in 2009 was 40.9
     (95% CI: 38.4-43.4) 2

•    The age-adjusted incidence rate of
     colorectal cancer in 1995 for AZ
     women was 38.1 per 100,000 (95%
     CI: 35.2-40.9) and in 2009 was 31.8
     (95% CI: 29.6-33.9) 2

1 Results from a trend test would tell us if this downward trend is statistically significant
2 Statistically significant difference.
Statistics for working
                            documents
AIs in AZ1:
•    The age-adjusted incidence rate of
     colorectal cancer in 1995 for AI
     men was 50.6 per 100,000 (95% CI:
     34.9-66.4) and in 2009 was 32.2
     (95% CI: 21.8-42.5). In 2005, the
     rate was 41.0 (95% CI: 28.8-53.3).

•    The age-adjusted incidence rate of
     colorectal cancer in 1995 for AI
     women was 9.7 per 100,000 (95%
     CI: 3.1-16.3) and in 2009 was 18.4
     (95% CI: 10.8-25.9). In 2006, the
     rate was 30.5 (20.4-40.5).2




1 Results from a trend test would tell us if this downward trend is statistically significant
2 Statistically significant difference comparing 1995 and 2006 for women.
Statistics for working
                 documents
The Cancer Data Query
System, incidence rates
can be access in two
ways:
  – Age-adjusted cancer
  Incidence rates

  – ACR Community
    Health Analysis Area
    Maps1
 1Tribespecific data is not publicly available. Community Health Analysis Areas are used to estimate
 Incidence rates based on Census blocks in Tribal areas and may include non-Tribal members.
Statistics for working
           documents
• What is an Arizona Community health analysis
  area (CHAA)?
CHAA basics:
  –   NOT Tribal specific data
  –   Built on the 2000 Census Block groups
  –   Contain a range of 5,000-190,000 residents
  –   Cancer cases are assigned based on place of residence
  –   PO boxes were assigned to the town of the zip code
  –   About 2% of cancer cases did not get assigned to CHAA
  –   Additional information on CHAA:
      http://www.azdhs.gov/phs/azchaa/CHAA_FAQ.pdf
Statistics for working
       documents
• Choose the cancer site and years
Statistics for working
      documents
• Select colorectal cancers and either
  2001-2004 or 1995-2000
Statistics for working
       documents
• Apply the filter for Indian community „yes/no‟
Statistics for working
          documents
• 14 CHAA areas had fewer than 10 colorectal cases
• Some CHAA incidence rates appear higher than others
• Navajo Nation CHAA had the highest amount of cases in any CHAA
  (n=40) (But not the highest incidence rate!)
Statistics for working
                    documents
CHAA age-adjusted incidence rates
for colorectal cancer from 2001-
20041:
•   The 95% CIs indicate that the rates
    for Yavapai-Prescott CHAA 282 per
    100,000 (95% CI: 0 – 835), Cocopah
    CHAA 86.0 (95% CI: 0-254.8) and
    other CHAAs with a small number
    of cases are unstable2

•   The Navajo Nation CHAA has a
    stable rate of 13.7 (95% CI: 9.4-
    18.0)

                                              1 Limited to Indian Community in CHAAs.
•   The Fort Mohave [Mojave] CHAA
                                         2 TECs are formalizing a small numbers protocol. Many
    rate of 39.4 (95% CI: 20.8-57.4) and Agencies do not report rates based on fewer than 20 cases.
    Salt River CHAA rate of 77.1 (95%
    CI: 40.9-113.3), these CHAAs are
    fairly stable2
Statistics for working
                  documents
What is the researcher‟s story that describes colorectal cancer?
•   National and AZ age-adjusted incidence rates for colorectal cancer are decreasing, but
    getting screened for colorectal cancer on an individual level is still VERY important

•   Among AIs in AZ, age-adjusted incidence rates may have decreased for AI men and may have
    increased for AI women from 1995 to 2009, but data is limited

•   Navajo Nation CHAA had the highest case count of colorectal cancer (n=40) from 2001-2004

•   The age-adjusted incidence rate of 13.7 (95% CI: 9.4-18.0) for colorectal cancers in the
    Navajo Nation CHAA is lower than the state and national rates

•   The Navajo Nation CHAA age-adjusted incidence rate is lower than Fort Mohave [Mojave]
    CHAA 39.4 (95% CI: 20.8-57.4) and Salt River CHAA 77.1 (95% CI: 40.9-113.3) per 100,000.
    These differences are statistically significant.

•   Other CHAA areas had higher reported rates, but these rates are unstable due to small
    numbers of cases
Statistics for working
            documents
Scenario 2. A multi-disciplinary team of Tribal cancer researchers want to
propose a case control study with several community members in order to
investigating the relationship between esophageal cancer and arsenic in
the drinking water among AI/AN populations in Arizona from 1995-2004.
Writing the project proposal introduction, the researchers want to know:

• What is the person, place, and time understudy?
• What statistics can the team use to describe the problem of esophageal
  cancer in AZ?
• How do we get the descriptive cancer data from the registry?
• Does the registry contain the exposure information (e.g., arsenic levels
  or other environmental exposures)?
• Does registry information tell us about the association between cancer
  and arsenic in the drinking water?
Statistics for working
                                documents
         What data does the researcher need?
         • Person
                 AI/AN esophageal cancer cases1

         • Place
                 Arizona state

         • Time
                 1995-2004
                 Data lag, limited to what is available2

1Tribespecific data is not publicly available. Community Health Analysis Areas are used to estimate
Incidence rates based on Census blocks in Tribal areas and may include non-Tribal members.
2Cancer data takes at least 18 months to check for completeness from the central registry.
http://azdhs.gov/phs/azchaa/CHAA_FAQ.pdf
Statistics for working
                 documents
What statistics do we use to determine the
risk of esophageal cancers among AIs in AZ?
Use age-adjusted incidence rates:
• Risk of getting disease
• Comparisons of groups


Use 95% confidence intervals:
• Rate differences are statistically significant
• Magnitude of the difference
• Stability of the rates1


 1Rates   may be unreliable with small numbers of cases. The 95% CIs will be a wide range.
Statistics for working
          documents
The Cancer Data Query
System, incidence rates
can be access in two
ways:
  – Age-adjusted cancer
  Incidence rates

  – ACR CHAA Maps
Statistics for working
            documents

 Age-adjusted incidence rates
      of esophageal cancer
         per 100,000
• All AZ residents 1995-2009:
   – 4.3 per 100,000 (95% CI: 4.0-4.9)

• All AZ men:
   – 1995: 6.9 (95% CI: 5.5-8.3)
   – 2009: 8.0 (95% CI: 6.8-9.2)

• All AZ women:
   – 1995: 1.6 (95% CI: 0-2.2)
   – 2009: 1.7 (95% CI: 1.1-2.3)
Statistics for working
              documents

 Age-adjusted incidence rates of
        esophageal cancer
     per 100,000 among AIs
• All American Indians AZ 1995-2009:
   – 3.0 per 100,000 (95% CI: 2.1-3.8)

• American Indian men in AZ:
   – 1995: 6.6 (95% CI: 0-15)
   – 2009: 5.0 (95% CI: 0-10.8)

• American Indian women in AZ:
   – 1995: 3.5 (95% CI: 0-9.1)
   – 2009: 3.1 (95% CI: 0-7.3)
Statistics for working
          documents
What is the researchers story for the proposal?
• In AZ, the age-adjusted incidence rate of esophageal cancer is 4.3
  per 100,000 (95% CI: 4.0-4.9) from 1995-2009

• Among AIs in AZ, the age-adjusted incidence rate of esophageal
  cancer of 3.0 per 100,000 (95% CI: 2.1-3.8) from 1995-2009, which
  is lower than the state rate; and, the difference is statistically
  significant.

• The registry does not include environmental exposure information
  like arsenic

• The registry information does not tell us about associations with
  exposure and disease risk
Summary

• Overview of Inter Tribal Council of
  Arizona (ITCA), Inc. Tribal Epidemiology
  Center (TEC)

• Epidemiology Basics

• Practical Applications of Epidemiology
  – Data Scenarios 1 & 2
2214 North Central Avenue, Phoenix, Arizona 85004
         p 602.258.4822, f 602.258.4825

              www.itcaonline.com
Additional
information
More Statistical Tests

P-values
• Estimated probability of rejecting the null
  hypothesis (H0) of a study question.
• Null hypothesis is usually a hypothesis of "no
  difference"
   – Ex: there is no difference between high perceived risk and low
     perceived risk groups
• Alternative hypothesis is a hypothesis of
  “difference”
   – Ex: there is a difference between high perceived risk and low
     perceived risk groups
Statistical Tests

P-values
• To be statistically significant, the p-value
  will usually be set to less than 0.05 (p <
  0.05)
• If the p-value is less than 0.05, then the
  null hypothesis can be rejected and the
  alternative hypothesis can be accepted
Statistical Tests

95% Confidence Intervals (95% CIs)
• A CI consists of a range of values that act as
  good estimates of the unknown population
  parameter
   – Ex: A 95% CI is the interval that you are 95% certain
     contains the true population value as it might be
     estimated from a much larger study.
• It is used to indicate if a measure is statistically
  significance of an estimate
Statistical Tests

95% Confidence Intervals (95% CIs)
• Can tell us about the magnitude of measure
  – Wide vs. narrow intervals
  – Wide intervals can indicate small sample or low
    power
  – Whether the measure is reliable
Public Cancer Data
                Resources
Public cancer data resources
• National Program of Cancer Registries (NPCR)
   http://www.cdc.gov/cancer/npcr/
• Surveillance Epidemiology and End Results (SEER)
   http://seer.cancer.gov/
• National Cancer Data Base (NCDB)
   http://www.facs.org/cancer/ncdb/
• Behavioral Risk Factor Surveillance Survey (BRFSS)
   http://www.cdc.gov/brfss/
• Agency for Healthcare Research and Quality – Library
http://www.ahrq.gov/clinic/ehclibrary/reslibcancer.htm

• PubMed
    http://www.ncbi.nlm.nih.gov/pubmed/

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Annual Arizona Conference for Tribal BCCEDP Collaboration, Flagstaff, AZ

  • 1. Inter Tribal Council of Arizona, Inc. Tribal Epidemiology Center TEC Director Jamie Ritchey, MPH, PhD August 7, 2012
  • 2. Objectives • Overview of Inter Tribal Council of Arizona (ITCA), Inc. Tribal Epidemiology Center (TEC) • Epidemiology Basics • Practical Applications of Epidemiology
  • 3. Overview of Inter Tribal Council of Arizona, Inc. (ITCA) Tribal Epidemiology Center (TEC)
  • 4. Tribal Epidemiology Center • Who we are • Where we are • What services are provided • How to request services and partnerships
  • 5. Tribal Epidemiology Center ITCA, Inc. Regional Epidemiology Center: • Established in 1996 • Mission: Empowering the American Indian Tribes in Arizona, Nevada, and Utah in the further development of health services and systems • Purpose: To support Tribally-driven Health Surveillance Systems that can assess both individual and community health status, facilitate planning, and manage existing health services
  • 7. Tribal Epidemiology Center • Services – Community health profile (CHP) assistance – Epidemiology and other public health trainings – Study and survey design – Data collection and analysis – Technical report creation and review – Educational materials for health-related topics – Coordination of services during outbreaks or disease cluster investigations – CHP and Community Health Accreditation (CHA) tool kits for Tribes coming soon!
  • 8. Tribal Epidemiology Center • How can I request ITCA, Inc. TEC services? – E-mail ITCA, Inc. TEC for assistance directly at: TECinfo@itcaonline.com – TEC staff will respond within 48 hours and provide you with a fillable form to complete – TEC staff will meet with you by phone or e-mail to discuss a project work plan – TEC staff will decide with you the format and delivery method of the final product1 1Please allow at least 2 weeks for project completion, possibly longer depending on the scope of the project
  • 10. Epidemiology Basics • Epidemiology – Definition – How public health professionals use it • Types of Epidemiology • Descriptive Epidemiology – Person, place, time – Measures – Relationship between measures
  • 11. Epidemiology Basics Epidemiology is defined as: “…the study of the distribution and determinants of health-related states or events in specified populations and the application of this study to control of health problems.”1 1 Gordis, L. Modern Epidemiology 2nd Edition. 2000. W.B. Saunders Company, Philadelphia. ISBN 0-7216-8338-X
  • 12. Epidemiology Basics • It enables public health professionals to: – Understand the local disease patterns – Identify populations at risk for disease – Establish associations with risk factors and disease – Determine causes of disease – Develop new prevention programs and policies – Set health-based standards
  • 13. Epidemiology Basics • Descriptive epidemiology1 – Person, place, time – Measures: counts, proportions, rates – Explains or quantifies a particular disease or problem (ex. Cancer rates) • Analytic epidemiology – Tests a hypothesis – Measures: relative risk, odds ratios – Describes associations between a risk factor and a disease (ex. Smoking and lung cancer relationship) 1Focus for today’s talk
  • 14. Epidemiology Basics • Person – Ex. Diagnosed Colorectal cancer cases • Place – Arizona Community Health Analysis Areas • Time – 1995-2000 – 2001-2004
  • 15. Epidemiology Basics • Uses statistical measures to describe: – New cases of disease and death – People living with disease – Identify possible risk factors for the disease
  • 16. Epidemiology Basics • Counts / Frequency The number of events (“cases”) that occur in a population of interest – Example: There were 87 cancer cases in Tribe A • Is this story complete? • What else would you like to know?
  • 17. Epidemiology Basics • Proportions give a magnitude to events • Useful info might include: – Time • 87 cancer cases in 1 year (1999) – Total Number of Deaths • 87 cancer deaths/1,000 total deaths = 0.087 • Multiply by 100%  0.087 x 100% = 8.7% of deaths were cancer cases in 1999
  • 18. Epidemiology Basics Types of Rates • Crude rates • Stratified or Specific Rates – Better detail – Uses specific population (age group, sex, ethnic group, etc.) – Ex. Cancer death rates in males & females • Adjusted rates – age
  • 19. Epidemiology Basics • Proportions – Prevalence (NOT a rate) – Not directly comparable across groups – Used for public health planning purposes to determine the burden of disease • Rates – Incidence and Mortality rates – Allow health comparisons within and between groups
  • 20. Epidemiology Basics • Incidence rate: Risk of disease development in the population (new cases) • Prevalence: Fraction of population with illness in population • Mortality rate: Risk of Death • Incidence and prevalence are related: I X P = Duration
  • 21. Epidemiology Basics • How do epidemiologists know when rates are statistically different? There are measures that can determine if differences are statistically significant… – P-values of p<0.05 indicate that measures have a statistically significant difference – 95% Confidence intervals that do not overlap are considered a way to tell if measures show a statistically significant difference. These intervals can also tell us about the magnitude of the difference.
  • 22. Epidemiology Basics Statistical measures are used to tell a story…but where do I get data to tell it?
  • 23. Practical Applications of Epidemiology
  • 24. Practical Applications of Epidemiology • Arizona Cancer Registry • Statistics for working documents – Scenarios
  • 25. Arizona Cancer Registry • Began in 1981 • Mandatory cancer reporting in 1988 Arizona Revised Statute §36-133 • Rules for case reporting in 1992 Arizona Administrative Code Title 9, Chapter 4 • Provide data to New Mexico Tumor Registry for American Indian registry for SEER statistics • Population-based NPCR registry: Arizona Cancer Registry Home page: – Cancer site http://www.azdhs.gov/phs/phstats/acr/ – Case demographics – Year of cancer diagnosis
  • 26. Arizona Cancer Registry What statistical measures are available? • Cancer case counts • Cancer incidence rates1 • Cancer mortality rates2 • Population estimates – Denominator data 1Age-adjusted incidence rates; 2Crude mortality rates per 100,000
  • 27. Statistics for working documents Scenario 1. A Tribal community cancer researcher has heard rumors from concerned community members that there may be a high risk of colorectal cancer in her area. From her training, she remembers that the national trend of age-adjusted incidence rate of colorectal cancers from 1992-2009 were dropping in the US1. She wants to determine if her community has a high risk of colorectal cancer compared to others. • What are the person, place, and time components? • What measure is needed to determine risk and can be directly compared across geographical areas? • How can I get this information from the Arizona cancer registry? 1 Age-adjusted colorectal cancer incidence rate trend slides from SEER are included in the presentation.
  • 28. Statistics for working documents What data does the researcher need? • Person – Colorectal cancer cases among AZ residents and Tribal community members • Place – Arizona state in community health analysis areas (CHAAs)1 • Time – Not specified – Data lag, limited to what is available2 1Tribespecific data is not publicly available. Community Health Analysis Areas are used to estimate Incidence rates based on Census blocks in Tribal areas and may include non-Tribal members. 2Cancer data takes at least 18 months to check for completeness from the central registry. http://azdhs.gov/phs/azchaa/CHAA_FAQ.pdf
  • 29. Statistics for working documents What statistics do we use to determine the risk of colorectal cancer comparing areas? Use age-adjusted incidence rates: • Risk of getting disease • Comparisons of groups Use 95% confidence intervals: • Rate differences are statistically significant • Magnitude of the difference • Stability of the rates1 1Rates may be unreliable with small numbers of cases. The 95% CIs will often be a wide range.
  • 31. Statistics for working documents Three ways to get the state data: • From the home page, go to the Cancer Data Query System link • Contact the Arizona Cancer Registry Data Section by e-mail or phone • Request services from http://www.azdhs.gov/phs/phstats/acr/ TEC
  • 32. Statistics for working documents The Cancer Data Query System, incidence rates can be access in two ways: – Age-adjusted cancer Incidence rates – ACR Community Health Analysis Area Maps1 1Tribespecific data is not publicly available. Community Health Analysis Areas are used to estimate Incidence rates based on Census blocks in Tribal areas and may include non-Tribal members.
  • 33. Statistics for working documents Incidence rates and 95% Confidence Intervals: – For AZ – By Year – All race/ethnicity – AI/ANs
  • 34. Statistics for working documents AZ colorectal cancer age-adjusted incidence rates show a decreasing trend from 1995-2009 for both males and females1 • The age-adjusted incidence rate of colorectal cancer in 1995 for AZ men was 57.8 per 100,000 (95% CI: 54.2-61.4) and in 2009 was 40.9 (95% CI: 38.4-43.4) 2 • The age-adjusted incidence rate of colorectal cancer in 1995 for AZ women was 38.1 per 100,000 (95% CI: 35.2-40.9) and in 2009 was 31.8 (95% CI: 29.6-33.9) 2 1 Results from a trend test would tell us if this downward trend is statistically significant 2 Statistically significant difference.
  • 35. Statistics for working documents AIs in AZ1: • The age-adjusted incidence rate of colorectal cancer in 1995 for AI men was 50.6 per 100,000 (95% CI: 34.9-66.4) and in 2009 was 32.2 (95% CI: 21.8-42.5). In 2005, the rate was 41.0 (95% CI: 28.8-53.3). • The age-adjusted incidence rate of colorectal cancer in 1995 for AI women was 9.7 per 100,000 (95% CI: 3.1-16.3) and in 2009 was 18.4 (95% CI: 10.8-25.9). In 2006, the rate was 30.5 (20.4-40.5).2 1 Results from a trend test would tell us if this downward trend is statistically significant 2 Statistically significant difference comparing 1995 and 2006 for women.
  • 36. Statistics for working documents The Cancer Data Query System, incidence rates can be access in two ways: – Age-adjusted cancer Incidence rates – ACR Community Health Analysis Area Maps1 1Tribespecific data is not publicly available. Community Health Analysis Areas are used to estimate Incidence rates based on Census blocks in Tribal areas and may include non-Tribal members.
  • 37. Statistics for working documents • What is an Arizona Community health analysis area (CHAA)? CHAA basics: – NOT Tribal specific data – Built on the 2000 Census Block groups – Contain a range of 5,000-190,000 residents – Cancer cases are assigned based on place of residence – PO boxes were assigned to the town of the zip code – About 2% of cancer cases did not get assigned to CHAA – Additional information on CHAA: http://www.azdhs.gov/phs/azchaa/CHAA_FAQ.pdf
  • 38. Statistics for working documents • Choose the cancer site and years
  • 39. Statistics for working documents • Select colorectal cancers and either 2001-2004 or 1995-2000
  • 40. Statistics for working documents • Apply the filter for Indian community „yes/no‟
  • 41. Statistics for working documents • 14 CHAA areas had fewer than 10 colorectal cases • Some CHAA incidence rates appear higher than others • Navajo Nation CHAA had the highest amount of cases in any CHAA (n=40) (But not the highest incidence rate!)
  • 42. Statistics for working documents CHAA age-adjusted incidence rates for colorectal cancer from 2001- 20041: • The 95% CIs indicate that the rates for Yavapai-Prescott CHAA 282 per 100,000 (95% CI: 0 – 835), Cocopah CHAA 86.0 (95% CI: 0-254.8) and other CHAAs with a small number of cases are unstable2 • The Navajo Nation CHAA has a stable rate of 13.7 (95% CI: 9.4- 18.0) 1 Limited to Indian Community in CHAAs. • The Fort Mohave [Mojave] CHAA 2 TECs are formalizing a small numbers protocol. Many rate of 39.4 (95% CI: 20.8-57.4) and Agencies do not report rates based on fewer than 20 cases. Salt River CHAA rate of 77.1 (95% CI: 40.9-113.3), these CHAAs are fairly stable2
  • 43. Statistics for working documents What is the researcher‟s story that describes colorectal cancer? • National and AZ age-adjusted incidence rates for colorectal cancer are decreasing, but getting screened for colorectal cancer on an individual level is still VERY important • Among AIs in AZ, age-adjusted incidence rates may have decreased for AI men and may have increased for AI women from 1995 to 2009, but data is limited • Navajo Nation CHAA had the highest case count of colorectal cancer (n=40) from 2001-2004 • The age-adjusted incidence rate of 13.7 (95% CI: 9.4-18.0) for colorectal cancers in the Navajo Nation CHAA is lower than the state and national rates • The Navajo Nation CHAA age-adjusted incidence rate is lower than Fort Mohave [Mojave] CHAA 39.4 (95% CI: 20.8-57.4) and Salt River CHAA 77.1 (95% CI: 40.9-113.3) per 100,000. These differences are statistically significant. • Other CHAA areas had higher reported rates, but these rates are unstable due to small numbers of cases
  • 44. Statistics for working documents Scenario 2. A multi-disciplinary team of Tribal cancer researchers want to propose a case control study with several community members in order to investigating the relationship between esophageal cancer and arsenic in the drinking water among AI/AN populations in Arizona from 1995-2004. Writing the project proposal introduction, the researchers want to know: • What is the person, place, and time understudy? • What statistics can the team use to describe the problem of esophageal cancer in AZ? • How do we get the descriptive cancer data from the registry? • Does the registry contain the exposure information (e.g., arsenic levels or other environmental exposures)? • Does registry information tell us about the association between cancer and arsenic in the drinking water?
  • 45. Statistics for working documents What data does the researcher need? • Person AI/AN esophageal cancer cases1 • Place Arizona state • Time 1995-2004 Data lag, limited to what is available2 1Tribespecific data is not publicly available. Community Health Analysis Areas are used to estimate Incidence rates based on Census blocks in Tribal areas and may include non-Tribal members. 2Cancer data takes at least 18 months to check for completeness from the central registry. http://azdhs.gov/phs/azchaa/CHAA_FAQ.pdf
  • 46. Statistics for working documents What statistics do we use to determine the risk of esophageal cancers among AIs in AZ? Use age-adjusted incidence rates: • Risk of getting disease • Comparisons of groups Use 95% confidence intervals: • Rate differences are statistically significant • Magnitude of the difference • Stability of the rates1 1Rates may be unreliable with small numbers of cases. The 95% CIs will be a wide range.
  • 47. Statistics for working documents The Cancer Data Query System, incidence rates can be access in two ways: – Age-adjusted cancer Incidence rates – ACR CHAA Maps
  • 48. Statistics for working documents Age-adjusted incidence rates of esophageal cancer per 100,000 • All AZ residents 1995-2009: – 4.3 per 100,000 (95% CI: 4.0-4.9) • All AZ men: – 1995: 6.9 (95% CI: 5.5-8.3) – 2009: 8.0 (95% CI: 6.8-9.2) • All AZ women: – 1995: 1.6 (95% CI: 0-2.2) – 2009: 1.7 (95% CI: 1.1-2.3)
  • 49. Statistics for working documents Age-adjusted incidence rates of esophageal cancer per 100,000 among AIs • All American Indians AZ 1995-2009: – 3.0 per 100,000 (95% CI: 2.1-3.8) • American Indian men in AZ: – 1995: 6.6 (95% CI: 0-15) – 2009: 5.0 (95% CI: 0-10.8) • American Indian women in AZ: – 1995: 3.5 (95% CI: 0-9.1) – 2009: 3.1 (95% CI: 0-7.3)
  • 50. Statistics for working documents What is the researchers story for the proposal? • In AZ, the age-adjusted incidence rate of esophageal cancer is 4.3 per 100,000 (95% CI: 4.0-4.9) from 1995-2009 • Among AIs in AZ, the age-adjusted incidence rate of esophageal cancer of 3.0 per 100,000 (95% CI: 2.1-3.8) from 1995-2009, which is lower than the state rate; and, the difference is statistically significant. • The registry does not include environmental exposure information like arsenic • The registry information does not tell us about associations with exposure and disease risk
  • 51. Summary • Overview of Inter Tribal Council of Arizona (ITCA), Inc. Tribal Epidemiology Center (TEC) • Epidemiology Basics • Practical Applications of Epidemiology – Data Scenarios 1 & 2
  • 52. 2214 North Central Avenue, Phoenix, Arizona 85004 p 602.258.4822, f 602.258.4825 www.itcaonline.com
  • 54. More Statistical Tests P-values • Estimated probability of rejecting the null hypothesis (H0) of a study question. • Null hypothesis is usually a hypothesis of "no difference" – Ex: there is no difference between high perceived risk and low perceived risk groups • Alternative hypothesis is a hypothesis of “difference” – Ex: there is a difference between high perceived risk and low perceived risk groups
  • 55. Statistical Tests P-values • To be statistically significant, the p-value will usually be set to less than 0.05 (p < 0.05) • If the p-value is less than 0.05, then the null hypothesis can be rejected and the alternative hypothesis can be accepted
  • 56. Statistical Tests 95% Confidence Intervals (95% CIs) • A CI consists of a range of values that act as good estimates of the unknown population parameter – Ex: A 95% CI is the interval that you are 95% certain contains the true population value as it might be estimated from a much larger study. • It is used to indicate if a measure is statistically significance of an estimate
  • 57. Statistical Tests 95% Confidence Intervals (95% CIs) • Can tell us about the magnitude of measure – Wide vs. narrow intervals – Wide intervals can indicate small sample or low power – Whether the measure is reliable
  • 58. Public Cancer Data Resources Public cancer data resources • National Program of Cancer Registries (NPCR) http://www.cdc.gov/cancer/npcr/ • Surveillance Epidemiology and End Results (SEER) http://seer.cancer.gov/ • National Cancer Data Base (NCDB) http://www.facs.org/cancer/ncdb/ • Behavioral Risk Factor Surveillance Survey (BRFSS) http://www.cdc.gov/brfss/ • Agency for Healthcare Research and Quality – Library http://www.ahrq.gov/clinic/ehclibrary/reslibcancer.htm • PubMed http://www.ncbi.nlm.nih.gov/pubmed/

Notes de l'éditeur

  1. The incidence rate of colorectal cancer in the United States is XX.X (95% CI: xx.x-xx.x), and is X times higher/lower among American Indian/Alaskan Natives from XXXX-XXXXIn Arizona, the incidence rate of colorectal cancer is XX.X (95% CI: xx.x-xx.x) and is x times higher/lower among American Indian/Alaskan Natives from XXXX-XXXX
  2. The highest rates are seen among Black (6.2) and White males (7.8)
  3. Arizona cancer registry NPCR stateSEER- Arizona Indians data provided to the New Mexico registry for calculation estimates2000-2009 eight participating hospitals in AZ