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Control of Acute
 Respiratory Infections in
         children
(or winning the battle against childhood
               pneumonia)

            Marilla Lucero
         RITM Research Forum
             April 23, 2012
Pathogens causing pneumonia in
               children
At least 1 respiratory pathogen was identified in 79% (122 of 154) of the patients.
                     Pediatrics 2004 113: 701-7
Childhood pneumonia is the leading
            cause of death in children <5 years.

                                              156 million new
                                            episodes worldwide
                               Pneumonia is responsible for ~19%
                                of all deaths in children < 5 years
                                 (70% in sub-Saharan Africa and
                                         South-East Asia)

                                  More than 2 million deaths/year
                                   due to pneumonia in children
                                             <5 years
                                                                      Slide
                                                                      courtesy of
Rudan I. et al. Bull World Health Org. 2008, 86(5): 408-41            GSK
Pneumonia kills more children than
               any other illness.



                                                                       Pneumonia
                                                                        kills more
                                                                        children
                                                                       than AIDS,
                                                                         malaria
                                                                            and
                                                                        measles
                                                                       combined!
                                                                              Slide
                                                                              courtesy of
Adapted from Figure 4 of Black RE, et al. Lancet 2010;375:1969–1987.          GSK
Pneumonia is the number 1 KILLER
             of Filipino children 1-59 mos of
                            age!
                                                        HIV     Deaths
                                                        0%                              Pertussis
                                                                                          0%

       Pneumonia                                              Injury
                                                                                         Measles
                                                                     Diarrhea             1%
       accounts for                                 NCD
                                                                8%
                                                                       12%
                                                                                                 Meningitis
                                                                                                   6%
                                                                                          Malaria
          34% of                                    16%                                      0%
        deaths in
                                                Other infections
          Filipino                                   23%                   Pneumonia
      children <5 yrs                                                         34%

            old.

                                                                                                                   Slide
Black RE et al for the Child Health Epidemiology Reference Group of WHO and UNICEF. Global, regional, and national courtesy of
causes of child mortality in 2008: a systematic analysis. Lancet 2010; 375: 1969–87                                GSK
Our children are most
                vulnerable to pneumonia !
               350000
                                                                    37 Filipino children 1-59
               300000                                               months of age die from
                                                                    pneumonia every day
               250000                                               (Black et al 2010,
No. of cases




                                                                    Lancet)
               200000

               150000

               100000

               50000

                    0
                        < 1 yr   1-4 yrs 5-14 yrs 15-49 yrs50-64 yrs > 65 yrs
                                   Pneumonia and LRTI
                                                                                      Slide
                                                                                      courtesy of
                                               FHSIS NEC-DOH 2008 Report              GSK
Slide
courtesy of
GSK
Etiology of pneumonia
          Pathogens causing pneumonia in children
          At least 1 respiratory pathogen was identified in 79% (122 of 154) of the patients.




Pediatrics 2004 113: 701-7
                                                                                                Slide
                                                                                                courtesy of
                                                                                                GSK
Table 2.1. Review of 15 studies that reported results of 1133 lung aspirates
 in hospitalized children without prior antibiotic therapy
 Source: Berman S.: Acute Respiratory Infections. Infect Dis Clin North Am. 1991




Bacterial                Positive       Number Number of studies with isolation rates of:
Pathogens                isolations (%) of studies


                                                                 ≤10%              11%-30%   31%-50%   >50%

Total pathogens              61                    15               0               1        3         11

Streptococcus                27                    11               0               5        4         2
pneumoniae
Haemophilus                  26                    11               1               8        2         0
influenzae
Staphylococcus               17                     9               4               4        1         0
aureus
Factors to consider in the Control of
           ARI in children
Disease Burden – Developing Countries

Risk Factors – Lack of immunization,
Malnutrition etc

Etiology – Streptococcus pneumoniae,
Haemophilus influenzae
ARI study group (Circa 1981-1990)

Main goal: To conduct studies that would help DOH programs for
the control of childhood pneumonia

1. Etiology studies:     Hospital-based studies on etiology

2. Risk Factors:         Community-based studies on child-care
                         practices
                         Risk Factors for Morbidity

3. Treatment:            Clinical trials on antibiotics against
                         pneumonia

4. Diagnosis of pneumonia in the Field: Study of signs and
                       symptoms of childhood pneumonia

5. Field trial of the WHO ARI control program
Assumptions supporting the early development
 of WHO-ARI Control Program

1. High mortality from ARI – due to


  a. pneumonia (70% of deaths)
  b. vaccine-preventable ARI: diphtheria, pertussis
  (whooping cough), and measles (30% of deaths).
2. High mortality from pneumonia was due to a high incidence
of bacterial pneumonia

a. Streptococcus pneumoniae and Haemophilus influenzae

b. Sp and Hi - sensitive to co-trimoxazole, penicillin, amoxicillin,
        chloramphenicol

c. pneumonia diagnosis and severity - determined by simple means

d. mothers could be trained to recognize the danger signs of
                pneumonia

e. community health workers could be trained to diagnose and treat
               pneumonia correctly.

3. Programs based on the treatment of pneumonia with
antimicrobial agents would reduce mortality from pneumonia
in developing countries
Tupasi TE, Lucero MG, Magdangal DM et al. Reviews Inf Dis 1990
WHO – PNEUMONIA CONTROL PROGRAM:
    The ARI Bohol study 1983-1990
Table 5.8: Cause-specific age-standardized mortality rates for children 0-4
                 years by time and area, and efficacy index E (%)


Cause of death    Death rate                      Efficacy of        2-sided
                  (per 1000 person-years)         intervention (%)   p value
                                                       (E)
All causes             NIA              IA
Years 1-4             14.95            17.08             22.50           0.009
Years 5-6             11.96            10.59
Pneumonia
Years 1-4              3.96            5.08              49.76           0.001
Years 5-6              3.15            2.03
Spin -off
Years 1-4              6.92            7.54              27.98           0.039
Years 5-6               5.9            4.63
Non-target
Years 1-4              4.06            4.46              -22.52          0.401
Years 5-6              2.92            3.93
Polysaccharide vaccine ----
Immunogenic only in adults

Polysaccharide vaccine conjugated to
protein carrier = Immunogenic in infants

Hib conjugate vaccine proven to be
efficacious in reducing Hib invasive
disease
CONCLUSION: THIS HEPTAVALENT PNEUMOCOCAL CONJUGATE
VACCINE APPEARS TO BE HIGHLY EFFECTIVE IN PREVENTING INVASIVE
DISEASE IN YOUNG CHILDREN.
Efficacy of an 11-valent pneumococcal conjugate
vaccine (11PCV) in preventing
radiographically confirmed pneumonia in children < 2
years of age:
a randomized, double-blind, placebo-controlled trial
in the Philippines
Sponsor: ARIVAC Consortium




SEROTYPES
11-valent pneumococcal conjugate vaccine (11PCV) or
   saline placebo (randomized 1:1)

• 11PCV with serotypes:
   1, 3, 5, 7F, 4, 6B, 9V, 14, 18C, 19F, 23F
Endpoint            11PCV                  Placebo              Vaccine
                                                                 Efficacy
               N             Rate     N               Rate

Radiographic   93            1040     120             1349         22.9
 pneumonia                                                      (-1.1;41.2)
WHO clinical                                                         0.1
pneumonia      934           10,448   930             10,454   (-9.4;8.7)
Cochrane Database of Systematic Reviews 2009, Issue 4.
Art. No.: CD004977. DOI: 10.1002/14651858.CD004977.pub2.
Lucero M, Dulalia V, Nillos L et al.




 META-ANALYSIS OF PNEUMOCOCCAL CONJUGATE
 VACCINES
POOLED VACCINE EFFICACY AGAINST INVASIVE PNEUMOCOCCAL DISEASE WAS 80%.




POOLED VACCINE EFFICACY AGAINST RADIOGRAPHIC PNEUMONIA WAS 19%.




POOLED VACCINE EFFICACY AGAINST WHO-Defined Clinical PNEUMONIA WAS 6%.
ARI study group (Circa 1981-1990)

Main goal: To conduct studies that would help DOH programs for
the control of childhood pneumonia

1. Etiology studies:     Hospital-based studies on etiology

2. Risk Factors:         Community-based studies on child-care
                         practices
                         Risk Factors for Morbidity

3. Treatment:            Clinical trials on antibiotics against
                         pneumonia

4. Diagnosis of pneumonia in the Field: Study of signs and
                       symptoms of childhood pneumonia

5. Field trial of the WHO ARI control program
ARI study group (Circa 1991- 2000)

Main goal: To conduct studies that would help the DOH in the
control of childhood pneumonia

1. Hib conjugate vaccine immunogenicity studies

2. Pneumococcal conjugate vaccine immunogenicity studies

3. Pneumococcal conjugate vaccine trial
ARI study group (Circa 2001-2012)

Main goal: To conduct studies that would help the DOH in the
control of childhood pneumonia

1. Influenza studies (Surveillance, Burden of Disease)

2. Etiology studies on childhood pneumonia (RITM-TOHOKU)

3. Monitoring of novel viruses (RITM-TOHOKU)
RITM-TOHOKU STUDY ON VIRAL AGENTS IN CHILDHOOD
PNEUMONIA, TACLOBAN, PHILIPPINES 2007-2011
ARI study group (2001-2012 and beyond – FUTURE STUDIES)

Main goal: To conduct studies that would help the DOH in the
control of childhood pneumonia

1. Influenza studies (Surveillance, Burden of Disease)

2. Etiology studies on childhood pneumonia (RITM-TOHOKU)

3. Monitoring of novel viruses (RITM-TOHOKU)

4. Etiology studies – adult pneumonia (RITM-TOHOKU)

5. Other vaccine studies (RSV, Other PCVs?)

6. Monitoring of pneumococcal strains from IPD cases

7. MICROBIOME STUDIES
Invasive Pneumococcal Disease (IPD) Caused by Nonvaccine Serotypes
Among Alaska Native Children With High Levels of 7-Valent
Pneumococcal Conjugate Vaccine Coverage. Singleton, Henessy, Bulkow et
al.




               REPLACEMENT PHENOMENON
ARI study group (2001-2012 and beyond – FUTURE STUDIES)

Main goal: To conduct studies that would help the DOH in the
control of childhood pneumonia

1. Influenza studies (Surveillance, Burden of Disease)

2. Etiology studies on childhood pneumonia (RITM-TOHOKU)

3. Monitoring of novel viruses (RITM-TOHOKU)

4. Etiology studies – adult pneumonia (RITM-TOHOKU)

5. Other vaccine studies (RSV, Other PCVs?)

6. Monitoring of pneumococcal strains from IPD cases

7. MICROBIOME STUDIES
VACCINATION AND THE PEDIATRIC MICROBIOME (2012-2014)
Collaborative study with Jay Craig Venter Institute (JCVI), Maryland


Exploratory study to define the nasopharyngeal (NP) microbiome
   (collection of microbes) from birth to 12 months of age using
   metagenomic DNA sequencing techiniques

What organisms comprise the microbiome? Abundances? Relative
  abundance over time.

Does microbiome structure change with infants’ health?

Change of microbiome after vaccination with PCV?

Findings could lead to development of tool to identify children at risk
   for disease because of an altered NP microbiome.


THANK YOU!
ARI - RITM Research Forum

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ARI - RITM Research Forum

  • 1. Control of Acute Respiratory Infections in children (or winning the battle against childhood pneumonia) Marilla Lucero RITM Research Forum April 23, 2012
  • 2. Pathogens causing pneumonia in children At least 1 respiratory pathogen was identified in 79% (122 of 154) of the patients. Pediatrics 2004 113: 701-7
  • 3. Childhood pneumonia is the leading cause of death in children <5 years. 156 million new episodes worldwide Pneumonia is responsible for ~19% of all deaths in children < 5 years (70% in sub-Saharan Africa and South-East Asia) More than 2 million deaths/year due to pneumonia in children <5 years Slide courtesy of Rudan I. et al. Bull World Health Org. 2008, 86(5): 408-41 GSK
  • 4. Pneumonia kills more children than any other illness. Pneumonia kills more children than AIDS, malaria and measles combined! Slide courtesy of Adapted from Figure 4 of Black RE, et al. Lancet 2010;375:1969–1987. GSK
  • 5. Pneumonia is the number 1 KILLER of Filipino children 1-59 mos of age! HIV Deaths 0% Pertussis 0% Pneumonia Injury Measles Diarrhea 1% accounts for NCD 8% 12% Meningitis 6% Malaria 34% of 16% 0% deaths in Other infections Filipino 23% Pneumonia children <5 yrs 34% old. Slide Black RE et al for the Child Health Epidemiology Reference Group of WHO and UNICEF. Global, regional, and national courtesy of causes of child mortality in 2008: a systematic analysis. Lancet 2010; 375: 1969–87 GSK
  • 6. Our children are most vulnerable to pneumonia ! 350000 37 Filipino children 1-59 300000 months of age die from pneumonia every day 250000 (Black et al 2010, No. of cases Lancet) 200000 150000 100000 50000 0 < 1 yr 1-4 yrs 5-14 yrs 15-49 yrs50-64 yrs > 65 yrs Pneumonia and LRTI Slide courtesy of FHSIS NEC-DOH 2008 Report GSK
  • 8. Etiology of pneumonia Pathogens causing pneumonia in children At least 1 respiratory pathogen was identified in 79% (122 of 154) of the patients. Pediatrics 2004 113: 701-7 Slide courtesy of GSK
  • 9. Table 2.1. Review of 15 studies that reported results of 1133 lung aspirates in hospitalized children without prior antibiotic therapy Source: Berman S.: Acute Respiratory Infections. Infect Dis Clin North Am. 1991 Bacterial Positive Number Number of studies with isolation rates of: Pathogens isolations (%) of studies ≤10% 11%-30% 31%-50% >50% Total pathogens 61 15 0 1 3 11 Streptococcus 27 11 0 5 4 2 pneumoniae Haemophilus 26 11 1 8 2 0 influenzae Staphylococcus 17 9 4 4 1 0 aureus
  • 10. Factors to consider in the Control of ARI in children Disease Burden – Developing Countries Risk Factors – Lack of immunization, Malnutrition etc Etiology – Streptococcus pneumoniae, Haemophilus influenzae
  • 11. ARI study group (Circa 1981-1990) Main goal: To conduct studies that would help DOH programs for the control of childhood pneumonia 1. Etiology studies: Hospital-based studies on etiology 2. Risk Factors: Community-based studies on child-care practices Risk Factors for Morbidity 3. Treatment: Clinical trials on antibiotics against pneumonia 4. Diagnosis of pneumonia in the Field: Study of signs and symptoms of childhood pneumonia 5. Field trial of the WHO ARI control program
  • 12.
  • 13. Assumptions supporting the early development of WHO-ARI Control Program 1. High mortality from ARI – due to a. pneumonia (70% of deaths) b. vaccine-preventable ARI: diphtheria, pertussis (whooping cough), and measles (30% of deaths).
  • 14. 2. High mortality from pneumonia was due to a high incidence of bacterial pneumonia a. Streptococcus pneumoniae and Haemophilus influenzae b. Sp and Hi - sensitive to co-trimoxazole, penicillin, amoxicillin, chloramphenicol c. pneumonia diagnosis and severity - determined by simple means d. mothers could be trained to recognize the danger signs of pneumonia e. community health workers could be trained to diagnose and treat pneumonia correctly. 3. Programs based on the treatment of pneumonia with antimicrobial agents would reduce mortality from pneumonia in developing countries
  • 15. Tupasi TE, Lucero MG, Magdangal DM et al. Reviews Inf Dis 1990
  • 16.
  • 17. WHO – PNEUMONIA CONTROL PROGRAM: The ARI Bohol study 1983-1990
  • 18.
  • 19.
  • 20. Table 5.8: Cause-specific age-standardized mortality rates for children 0-4 years by time and area, and efficacy index E (%) Cause of death Death rate Efficacy of 2-sided (per 1000 person-years) intervention (%) p value (E) All causes NIA IA Years 1-4 14.95 17.08 22.50 0.009 Years 5-6 11.96 10.59 Pneumonia Years 1-4 3.96 5.08 49.76 0.001 Years 5-6 3.15 2.03 Spin -off Years 1-4 6.92 7.54 27.98 0.039 Years 5-6 5.9 4.63 Non-target Years 1-4 4.06 4.46 -22.52 0.401 Years 5-6 2.92 3.93
  • 21.
  • 22.
  • 23.
  • 24. Polysaccharide vaccine ---- Immunogenic only in adults Polysaccharide vaccine conjugated to protein carrier = Immunogenic in infants Hib conjugate vaccine proven to be efficacious in reducing Hib invasive disease
  • 25.
  • 26. CONCLUSION: THIS HEPTAVALENT PNEUMOCOCAL CONJUGATE VACCINE APPEARS TO BE HIGHLY EFFECTIVE IN PREVENTING INVASIVE DISEASE IN YOUNG CHILDREN.
  • 27.
  • 28. Efficacy of an 11-valent pneumococcal conjugate vaccine (11PCV) in preventing radiographically confirmed pneumonia in children < 2 years of age: a randomized, double-blind, placebo-controlled trial in the Philippines Sponsor: ARIVAC Consortium SEROTYPES 11-valent pneumococcal conjugate vaccine (11PCV) or saline placebo (randomized 1:1) • 11PCV with serotypes: 1, 3, 5, 7F, 4, 6B, 9V, 14, 18C, 19F, 23F
  • 29. Endpoint 11PCV Placebo Vaccine Efficacy N Rate N Rate Radiographic 93 1040 120 1349 22.9 pneumonia (-1.1;41.2) WHO clinical 0.1 pneumonia 934 10,448 930 10,454 (-9.4;8.7)
  • 30. Cochrane Database of Systematic Reviews 2009, Issue 4. Art. No.: CD004977. DOI: 10.1002/14651858.CD004977.pub2. Lucero M, Dulalia V, Nillos L et al. META-ANALYSIS OF PNEUMOCOCCAL CONJUGATE VACCINES
  • 31. POOLED VACCINE EFFICACY AGAINST INVASIVE PNEUMOCOCCAL DISEASE WAS 80%. POOLED VACCINE EFFICACY AGAINST RADIOGRAPHIC PNEUMONIA WAS 19%. POOLED VACCINE EFFICACY AGAINST WHO-Defined Clinical PNEUMONIA WAS 6%.
  • 32. ARI study group (Circa 1981-1990) Main goal: To conduct studies that would help DOH programs for the control of childhood pneumonia 1. Etiology studies: Hospital-based studies on etiology 2. Risk Factors: Community-based studies on child-care practices Risk Factors for Morbidity 3. Treatment: Clinical trials on antibiotics against pneumonia 4. Diagnosis of pneumonia in the Field: Study of signs and symptoms of childhood pneumonia 5. Field trial of the WHO ARI control program
  • 33. ARI study group (Circa 1991- 2000) Main goal: To conduct studies that would help the DOH in the control of childhood pneumonia 1. Hib conjugate vaccine immunogenicity studies 2. Pneumococcal conjugate vaccine immunogenicity studies 3. Pneumococcal conjugate vaccine trial
  • 34. ARI study group (Circa 2001-2012) Main goal: To conduct studies that would help the DOH in the control of childhood pneumonia 1. Influenza studies (Surveillance, Burden of Disease) 2. Etiology studies on childhood pneumonia (RITM-TOHOKU) 3. Monitoring of novel viruses (RITM-TOHOKU)
  • 35. RITM-TOHOKU STUDY ON VIRAL AGENTS IN CHILDHOOD PNEUMONIA, TACLOBAN, PHILIPPINES 2007-2011
  • 36.
  • 37. ARI study group (2001-2012 and beyond – FUTURE STUDIES) Main goal: To conduct studies that would help the DOH in the control of childhood pneumonia 1. Influenza studies (Surveillance, Burden of Disease) 2. Etiology studies on childhood pneumonia (RITM-TOHOKU) 3. Monitoring of novel viruses (RITM-TOHOKU) 4. Etiology studies – adult pneumonia (RITM-TOHOKU) 5. Other vaccine studies (RSV, Other PCVs?) 6. Monitoring of pneumococcal strains from IPD cases 7. MICROBIOME STUDIES
  • 38. Invasive Pneumococcal Disease (IPD) Caused by Nonvaccine Serotypes Among Alaska Native Children With High Levels of 7-Valent Pneumococcal Conjugate Vaccine Coverage. Singleton, Henessy, Bulkow et al. REPLACEMENT PHENOMENON
  • 39. ARI study group (2001-2012 and beyond – FUTURE STUDIES) Main goal: To conduct studies that would help the DOH in the control of childhood pneumonia 1. Influenza studies (Surveillance, Burden of Disease) 2. Etiology studies on childhood pneumonia (RITM-TOHOKU) 3. Monitoring of novel viruses (RITM-TOHOKU) 4. Etiology studies – adult pneumonia (RITM-TOHOKU) 5. Other vaccine studies (RSV, Other PCVs?) 6. Monitoring of pneumococcal strains from IPD cases 7. MICROBIOME STUDIES
  • 40. VACCINATION AND THE PEDIATRIC MICROBIOME (2012-2014) Collaborative study with Jay Craig Venter Institute (JCVI), Maryland Exploratory study to define the nasopharyngeal (NP) microbiome (collection of microbes) from birth to 12 months of age using metagenomic DNA sequencing techiniques What organisms comprise the microbiome? Abundances? Relative abundance over time. Does microbiome structure change with infants’ health? Change of microbiome after vaccination with PCV? Findings could lead to development of tool to identify children at risk for disease because of an altered NP microbiome. THANK YOU!