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http://hdl.handle.net/1926/161
ITK Tutorial Presentation Slides-953
ITK Tutorial Presentation Slides-953
Kitware Kitware
1- List of modalities and study types 2- CT/US/DX Study Structure 3- DICOM composite instance IOD information module 4- Storage of DICOM image in PACS server 5- Imaging Data 6- Query and Retrieval from PACS 7- Window Width/ Window Center 8- DCM File Sections
Structure of DICOM Image
Structure of DICOM Image
isha saxena
On March 23, 2016, Prof. Henning Müller (HES-SO Valais-Wallis and Martinos Center) presented Medical image analysis and big data evaluation infrastructures at Stanford medicine.
Medical image analysis and big data evaluation infrastructures
Medical image analysis and big data evaluation infrastructures
Institute of Information Systems (HES-SO)
Presented by Dr Maria Susana Avila Garcia at the
Efficiency and Effectiveness: Shared services to support STEM subjects
Efficiency and Effectiveness: Shared services to support STEM subjects
Jisc
Deep Learning per l'analisi delle immagini mediche
Dli meetup moccia
Dli meetup moccia
Deep Learning Italia
Presented by Andrew Long at the JISC Future of Research Conference, 19th October 2010
TexGen: Open Source Software for Modelling of Textile Composites
TexGen: Open Source Software for Modelling of Textile Composites
Jisc
NeuroPoly
NeuroPoly
jcohenadad
Track 16. Doctoral Consortium Authors: Jorge Hernández Rodríguez, María José Rodríguez Conde and Francisco Javier Cabrero Fraile.
Artificial Neural Networks applications in Computer Aided Diagnosis. System d...
Artificial Neural Networks applications in Computer Aided Diagnosis. System d...
Technological Ecosystems for Enhancing Multiculturality
Recommandé
http://hdl.handle.net/1926/161
ITK Tutorial Presentation Slides-953
ITK Tutorial Presentation Slides-953
Kitware Kitware
1- List of modalities and study types 2- CT/US/DX Study Structure 3- DICOM composite instance IOD information module 4- Storage of DICOM image in PACS server 5- Imaging Data 6- Query and Retrieval from PACS 7- Window Width/ Window Center 8- DCM File Sections
Structure of DICOM Image
Structure of DICOM Image
isha saxena
On March 23, 2016, Prof. Henning Müller (HES-SO Valais-Wallis and Martinos Center) presented Medical image analysis and big data evaluation infrastructures at Stanford medicine.
Medical image analysis and big data evaluation infrastructures
Medical image analysis and big data evaluation infrastructures
Institute of Information Systems (HES-SO)
Presented by Dr Maria Susana Avila Garcia at the
Efficiency and Effectiveness: Shared services to support STEM subjects
Efficiency and Effectiveness: Shared services to support STEM subjects
Jisc
Deep Learning per l'analisi delle immagini mediche
Dli meetup moccia
Dli meetup moccia
Deep Learning Italia
Presented by Andrew Long at the JISC Future of Research Conference, 19th October 2010
TexGen: Open Source Software for Modelling of Textile Composites
TexGen: Open Source Software for Modelling of Textile Composites
Jisc
NeuroPoly
NeuroPoly
jcohenadad
Track 16. Doctoral Consortium Authors: Jorge Hernández Rodríguez, María José Rodríguez Conde and Francisco Javier Cabrero Fraile.
Artificial Neural Networks applications in Computer Aided Diagnosis. System d...
Artificial Neural Networks applications in Computer Aided Diagnosis. System d...
Technological Ecosystems for Enhancing Multiculturality
Talk @ ACM SF Bayarea Chapter on Deep Learning for medical imaging space. The talk covers use cases, special challenges and solutions for Deep Learning for Medical Image Analysis using Tensorflow+Keras. You will learn about: - Use cases for Deep Learning in Medical Image Analysis - Different DNN architectures used for Medical Image Analysis - Special purpose compute / accelerators for Deep Learning (in the Cloud / On-prem) - How to parallelize your models for faster training of models and serving for inferenceing. - Optimization techniques to get the best performance from your cluster (like Kubernetes/ Apache Mesos / Spark) - How to build an efficient Data Pipeline for Medical Image Analysis using Deep Learning - Resources to jump start your journey - like public data sets, common models used in Medical Image Analysis
Deep learning for medical imaging
Deep learning for medical imaging
geetachauhan
Seminar topic Slide show
A study of different tools for medical image processing
A study of different tools for medical image processing
Swarada Kanap
Use Cases Machine Learning for Healthcare
Use Cases Machine Learning for Healthcare
Use Cases Machine Learning for Healthcare
Deep Learning Italia
Dan Lee from Dentuit AI presented an Intro to Deep Learning for Medical Image Analysis at the Maryland AI meetup (https://www.meetup.com/Maryland-AI), May 27, 2020. Visit https://www.youtube.com/watch?v=xl8i7CGDQi0 for video.
Intro to Deep Learning for Medical Image Analysis, with Dan Lee from Dentuit AI
Intro to Deep Learning for Medical Image Analysis, with Dan Lee from Dentuit AI
Seth Grimes
Design and manufacturing of coils for MRI application offered by NeuroPoly laboratory at Polytechnique Montreal
Design and manufacturing of coils for MRI application
Design and manufacturing of coils for MRI application
NeuroPoly
This talk will cover various medical applications of deep learning including tumor segmentation in histology slides, MRI, CT, and X-Ray data. Also, more complicated tasks such as cell counting where the challenge is to count how many objects are in an image. It will also cover generative adversarial networks and how they can be used for medical applications. This presentation is accessible to non-doctors and non-computer scientists.
A survey of deep learning approaches to medical applications
A survey of deep learning approaches to medical applications
Joseph Paul Cohen PhD
A quick overview of some of the common terms and phrases used in artificial intelligence, for radiologists.
A-Z of AI in Radiology
A-Z of AI in Radiology
Dr Hugh Harvey
https://www.irjet.net/archives/V6/i7/IRJET-V6I789.pdf
IRJET- Automated Measurement of AVR Feature in Fundus Images using Image ...
IRJET- Automated Measurement of AVR Feature in Fundus Images using Image ...
IRJET Journal
this presentation is a continuation of the previous one. In this presentation, the work process for individual steps has been clearly explained with snippets of code taken from the source code. This is present along with output visualization, advantages and conclusion.
Detection of medical instruments project- PART 2
Detection of medical instruments project- PART 2
Sairam Adithya
Microelectrode arrays (MEAs) have been applied for in vivo and in vitro recording and stimulation of electrogenic cells, namely neurons and cardiac myocytes, for almost four decades. Extracellular recordings using the MEA technique inflict minimum adverse effects on cells and enable long term applications such as implants in brain or heart tissue. Hence, MEAs pose a powerful tool for studying the processes of learning and memory, investigating the pharmacological impacts of drugs and the fundamentals of the basic electrical interface between novel electrode materials and biological tissue. Yet in order to study the areas mentioned above, powerful signal processing and data analysis tools are necessary. In this paper a novel toolbox for the offline analysis of cell signals is presented that allows a variety of parameters to be detected and analyzed. We developed an intuitive graphical user interface (GUI) that enables users to perform high quality data analysis. The presented MATLAB® based toolbox gives the opportunity to examine a multitude of parameters, such as spike and neural burst timestamps, network bursts, as well as heart beat frequency and signal propagation for cardiomyocytes, signal-to-noise ratio and many more. Additionally a spike-sorting tool is included, offering a powerful tool for cases of multiple cell recordings on a single microelectrode. For stimulation purposes, artifacts caused by the stimulation signal can be removed from the recording, allowing the detection of field potentials as early as 5 ms after the stimulation.
DrCell – A Software Tool for the Analysis of Cell Signals Recorded with Extra...
DrCell – A Software Tool for the Analysis of Cell Signals Recorded with Extra...
CSCJournals
SCT course 2019-08-08
SCT course
SCT course
NeuroPoly
Cork Big Data & Analytics Group
2017 07 03_meetup_d
2017 07 03_meetup_d
Dana Brophy
Lecture4981 1
Lecture4981 1
mohanvelin
Presentation given at Repository Fringe 2011.
Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding vi...
Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding vi...
Repository Fringe
SHUBHAM _IET
SHUBHAM _IET
Shubham Soni
A standard recommendation for Digital Pathology Information Web-Services. A novel recommendation for the Digital Pathology Information Web-Services (DPIWS) standard is presented, with respect to specific characteristics of the informative content of discourse. The recommendation establishes a common software interface for the exchange of digital pathology (DP)images and related metadata over the web, independently of storage, encoding, and internal handling details. Thepro-posed structure is implemented and tested in a “Pathomation”software environment.
Digital Pathology Information Web Services (DPIWS): Convergence in Digital Pa...
Digital Pathology Information Web Services (DPIWS): Convergence in Digital Pa...
Yves Sucaet
Document from thesis done by Bsc students as graduation research , to develop a model that detect a cash card fraud base on the cash card holder pattern ,the technique used to detect fraud inspired from immune system
Developing an Artificial Immune Model for Cash Fraud Detection
Developing an Artificial Immune Model for Cash Fraud Detection
khawla Osama
http://imatge-upc.github.io/telecombcn-2016-dlcv/ Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
Deep Learning for Computer Vision: Medical Imaging (UPC 2016)
Deep Learning for Computer Vision: Medical Imaging (UPC 2016)
Universitat Politècnica de Catalunya
Bioinformatics and pathology are obvious scientific partners. Bioinformatics often takes places at the most basic (almost chemical, or even physical) level of life, but much of its procedures to obtain data are destructive. Pathology on the other hand takes place at a much more coarse level of data acquisition (usually where the physical properties of visible light end), but has the advantage of being rooted in the tradition of medicine. The traditional paradigm of pathology is "tissue is the issue". Morphology (exactly the component that often gets overlooked in bioinformatics) plays a large role and helps millions of patients each year around the world. Pathology is proven technology, bioinformatics is limited to niche applications. With the development of whole slide imaging technology some twenty years ago, digital pathology became possible. Observations that used to be for the eyes of the pathologist only, could now be captured and translated into high-resolution pixels, and studied by and communicated to many. Many began to dream of automated tissue evaluation systems and AI-pathology, some even going as far as to suggest the replacement of the pathologist by intelligent computer systems. Meanwhile in several areas of bioinformatics, new limits are being hit. Yes, we can do high-throughput experiments, but noisy datasets are often the results, (inter- and even intra-observer) replicability is difficult, and statistics only offer limited relief. The goal of this introductory lecture is to highlight the problems as well as opportunities for both fields of study, and how exchange of experiences, and (in a later stadium) integration of techniques close the scientific gap that still exists in a great many areas. There is no lack of pathology-centric workshops that offer insights into the world of algorithms. With the CPW event however, we take another approach. We want to bring together the most advanced groups in digital pathology, with the bioinformatics community, to explore the opportunities that exist on both sides of the fence. We start by explaining the basic data types that are introduced by digital pathology. We also explain where they come from, and why this presents unique challenges when it comes to data mining and image analysis. Finally, we introduce PMA.start, a free software environment that can be used to universally gain access to digital pathology (imaging) data. Bioinformatics groups can help quantify, model, and reduce morphological whole tissue data. Pathologists can help interpret and explain heterogeneous high-throughput datasets. And the first seeds of such collaboration can be planted right here, in Athens.
Digital pathology and its importance as an omics data layer
Digital pathology and its importance as an omics data layer
Yves Sucaet
Cassandra/Spark solutions for Genomic big data Analysis and Visualization Cassandra summit 2016
Epinomics cassandra summit-submit
Epinomics cassandra summit-submit
Anupama Joshi
This presentation was provided by Violeta Ilik of Northwestern University during the NISO Virtual Conference held on Feb 15, 2017, entitled Institutional Repositories: Ensuring Yours is Populated, Useful and Thriving. The DOI for this presentation is http://dx.doi.org/10.18131/G3VP6R
Ilik - Beyond the Manuscript: Using IRs for Non Traditional Content Types
Ilik - Beyond the Manuscript: Using IRs for Non Traditional Content Types
National Information Standards Organization (NISO)
An Introduction to eScience and the Grid by Prof. Richard Sinnott.
Sinnott Paper
Sinnott Paper
Johanna Green
Contenu connexe
Tendances
Talk @ ACM SF Bayarea Chapter on Deep Learning for medical imaging space. The talk covers use cases, special challenges and solutions for Deep Learning for Medical Image Analysis using Tensorflow+Keras. You will learn about: - Use cases for Deep Learning in Medical Image Analysis - Different DNN architectures used for Medical Image Analysis - Special purpose compute / accelerators for Deep Learning (in the Cloud / On-prem) - How to parallelize your models for faster training of models and serving for inferenceing. - Optimization techniques to get the best performance from your cluster (like Kubernetes/ Apache Mesos / Spark) - How to build an efficient Data Pipeline for Medical Image Analysis using Deep Learning - Resources to jump start your journey - like public data sets, common models used in Medical Image Analysis
Deep learning for medical imaging
Deep learning for medical imaging
geetachauhan
Seminar topic Slide show
A study of different tools for medical image processing
A study of different tools for medical image processing
Swarada Kanap
Use Cases Machine Learning for Healthcare
Use Cases Machine Learning for Healthcare
Use Cases Machine Learning for Healthcare
Deep Learning Italia
Dan Lee from Dentuit AI presented an Intro to Deep Learning for Medical Image Analysis at the Maryland AI meetup (https://www.meetup.com/Maryland-AI), May 27, 2020. Visit https://www.youtube.com/watch?v=xl8i7CGDQi0 for video.
Intro to Deep Learning for Medical Image Analysis, with Dan Lee from Dentuit AI
Intro to Deep Learning for Medical Image Analysis, with Dan Lee from Dentuit AI
Seth Grimes
Design and manufacturing of coils for MRI application offered by NeuroPoly laboratory at Polytechnique Montreal
Design and manufacturing of coils for MRI application
Design and manufacturing of coils for MRI application
NeuroPoly
This talk will cover various medical applications of deep learning including tumor segmentation in histology slides, MRI, CT, and X-Ray data. Also, more complicated tasks such as cell counting where the challenge is to count how many objects are in an image. It will also cover generative adversarial networks and how they can be used for medical applications. This presentation is accessible to non-doctors and non-computer scientists.
A survey of deep learning approaches to medical applications
A survey of deep learning approaches to medical applications
Joseph Paul Cohen PhD
A quick overview of some of the common terms and phrases used in artificial intelligence, for radiologists.
A-Z of AI in Radiology
A-Z of AI in Radiology
Dr Hugh Harvey
https://www.irjet.net/archives/V6/i7/IRJET-V6I789.pdf
IRJET- Automated Measurement of AVR Feature in Fundus Images using Image ...
IRJET- Automated Measurement of AVR Feature in Fundus Images using Image ...
IRJET Journal
this presentation is a continuation of the previous one. In this presentation, the work process for individual steps has been clearly explained with snippets of code taken from the source code. This is present along with output visualization, advantages and conclusion.
Detection of medical instruments project- PART 2
Detection of medical instruments project- PART 2
Sairam Adithya
Microelectrode arrays (MEAs) have been applied for in vivo and in vitro recording and stimulation of electrogenic cells, namely neurons and cardiac myocytes, for almost four decades. Extracellular recordings using the MEA technique inflict minimum adverse effects on cells and enable long term applications such as implants in brain or heart tissue. Hence, MEAs pose a powerful tool for studying the processes of learning and memory, investigating the pharmacological impacts of drugs and the fundamentals of the basic electrical interface between novel electrode materials and biological tissue. Yet in order to study the areas mentioned above, powerful signal processing and data analysis tools are necessary. In this paper a novel toolbox for the offline analysis of cell signals is presented that allows a variety of parameters to be detected and analyzed. We developed an intuitive graphical user interface (GUI) that enables users to perform high quality data analysis. The presented MATLAB® based toolbox gives the opportunity to examine a multitude of parameters, such as spike and neural burst timestamps, network bursts, as well as heart beat frequency and signal propagation for cardiomyocytes, signal-to-noise ratio and many more. Additionally a spike-sorting tool is included, offering a powerful tool for cases of multiple cell recordings on a single microelectrode. For stimulation purposes, artifacts caused by the stimulation signal can be removed from the recording, allowing the detection of field potentials as early as 5 ms after the stimulation.
DrCell – A Software Tool for the Analysis of Cell Signals Recorded with Extra...
DrCell – A Software Tool for the Analysis of Cell Signals Recorded with Extra...
CSCJournals
SCT course 2019-08-08
SCT course
SCT course
NeuroPoly
Cork Big Data & Analytics Group
2017 07 03_meetup_d
2017 07 03_meetup_d
Dana Brophy
Lecture4981 1
Lecture4981 1
mohanvelin
Presentation given at Repository Fringe 2011.
Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding vi...
Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding vi...
Repository Fringe
SHUBHAM _IET
SHUBHAM _IET
Shubham Soni
A standard recommendation for Digital Pathology Information Web-Services. A novel recommendation for the Digital Pathology Information Web-Services (DPIWS) standard is presented, with respect to specific characteristics of the informative content of discourse. The recommendation establishes a common software interface for the exchange of digital pathology (DP)images and related metadata over the web, independently of storage, encoding, and internal handling details. Thepro-posed structure is implemented and tested in a “Pathomation”software environment.
Digital Pathology Information Web Services (DPIWS): Convergence in Digital Pa...
Digital Pathology Information Web Services (DPIWS): Convergence in Digital Pa...
Yves Sucaet
Document from thesis done by Bsc students as graduation research , to develop a model that detect a cash card fraud base on the cash card holder pattern ,the technique used to detect fraud inspired from immune system
Developing an Artificial Immune Model for Cash Fraud Detection
Developing an Artificial Immune Model for Cash Fraud Detection
khawla Osama
http://imatge-upc.github.io/telecombcn-2016-dlcv/ Deep learning technologies are at the core of the current revolution in artificial intelligence for multimedia data analysis. The convergence of big annotated data and affordable GPU hardware has allowed the training of neural networks for data analysis tasks which had been addressed until now with hand-crafted features. Architectures such as convolutional neural networks, recurrent neural networks and Q-nets for reinforcement learning have shaped a brand new scenario in signal processing. This course will cover the basic principles and applications of deep learning to computer vision problems, such as image classification, object detection or text captioning.
Deep Learning for Computer Vision: Medical Imaging (UPC 2016)
Deep Learning for Computer Vision: Medical Imaging (UPC 2016)
Universitat Politècnica de Catalunya
Bioinformatics and pathology are obvious scientific partners. Bioinformatics often takes places at the most basic (almost chemical, or even physical) level of life, but much of its procedures to obtain data are destructive. Pathology on the other hand takes place at a much more coarse level of data acquisition (usually where the physical properties of visible light end), but has the advantage of being rooted in the tradition of medicine. The traditional paradigm of pathology is "tissue is the issue". Morphology (exactly the component that often gets overlooked in bioinformatics) plays a large role and helps millions of patients each year around the world. Pathology is proven technology, bioinformatics is limited to niche applications. With the development of whole slide imaging technology some twenty years ago, digital pathology became possible. Observations that used to be for the eyes of the pathologist only, could now be captured and translated into high-resolution pixels, and studied by and communicated to many. Many began to dream of automated tissue evaluation systems and AI-pathology, some even going as far as to suggest the replacement of the pathologist by intelligent computer systems. Meanwhile in several areas of bioinformatics, new limits are being hit. Yes, we can do high-throughput experiments, but noisy datasets are often the results, (inter- and even intra-observer) replicability is difficult, and statistics only offer limited relief. The goal of this introductory lecture is to highlight the problems as well as opportunities for both fields of study, and how exchange of experiences, and (in a later stadium) integration of techniques close the scientific gap that still exists in a great many areas. There is no lack of pathology-centric workshops that offer insights into the world of algorithms. With the CPW event however, we take another approach. We want to bring together the most advanced groups in digital pathology, with the bioinformatics community, to explore the opportunities that exist on both sides of the fence. We start by explaining the basic data types that are introduced by digital pathology. We also explain where they come from, and why this presents unique challenges when it comes to data mining and image analysis. Finally, we introduce PMA.start, a free software environment that can be used to universally gain access to digital pathology (imaging) data. Bioinformatics groups can help quantify, model, and reduce morphological whole tissue data. Pathologists can help interpret and explain heterogeneous high-throughput datasets. And the first seeds of such collaboration can be planted right here, in Athens.
Digital pathology and its importance as an omics data layer
Digital pathology and its importance as an omics data layer
Yves Sucaet
Cassandra/Spark solutions for Genomic big data Analysis and Visualization Cassandra summit 2016
Epinomics cassandra summit-submit
Epinomics cassandra summit-submit
Anupama Joshi
Tendances
(20)
Deep learning for medical imaging
Deep learning for medical imaging
A study of different tools for medical image processing
A study of different tools for medical image processing
Use Cases Machine Learning for Healthcare
Use Cases Machine Learning for Healthcare
Intro to Deep Learning for Medical Image Analysis, with Dan Lee from Dentuit AI
Intro to Deep Learning for Medical Image Analysis, with Dan Lee from Dentuit AI
Design and manufacturing of coils for MRI application
Design and manufacturing of coils for MRI application
A survey of deep learning approaches to medical applications
A survey of deep learning approaches to medical applications
A-Z of AI in Radiology
A-Z of AI in Radiology
IRJET- Automated Measurement of AVR Feature in Fundus Images using Image ...
IRJET- Automated Measurement of AVR Feature in Fundus Images using Image ...
Detection of medical instruments project- PART 2
Detection of medical instruments project- PART 2
DrCell – A Software Tool for the Analysis of Cell Signals Recorded with Extra...
DrCell – A Software Tool for the Analysis of Cell Signals Recorded with Extra...
SCT course
SCT course
2017 07 03_meetup_d
2017 07 03_meetup_d
Lecture4981 1
Lecture4981 1
Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding vi...
Xiaohong Gao (Middlesex University) – MIRAGE 2011 (developing an embedding vi...
SHUBHAM _IET
SHUBHAM _IET
Digital Pathology Information Web Services (DPIWS): Convergence in Digital Pa...
Digital Pathology Information Web Services (DPIWS): Convergence in Digital Pa...
Developing an Artificial Immune Model for Cash Fraud Detection
Developing an Artificial Immune Model for Cash Fraud Detection
Deep Learning for Computer Vision: Medical Imaging (UPC 2016)
Deep Learning for Computer Vision: Medical Imaging (UPC 2016)
Digital pathology and its importance as an omics data layer
Digital pathology and its importance as an omics data layer
Epinomics cassandra summit-submit
Epinomics cassandra summit-submit
Similaire à ITK Tutorial Presentation Slides-943
This presentation was provided by Violeta Ilik of Northwestern University during the NISO Virtual Conference held on Feb 15, 2017, entitled Institutional Repositories: Ensuring Yours is Populated, Useful and Thriving. The DOI for this presentation is http://dx.doi.org/10.18131/G3VP6R
Ilik - Beyond the Manuscript: Using IRs for Non Traditional Content Types
Ilik - Beyond the Manuscript: Using IRs for Non Traditional Content Types
National Information Standards Organization (NISO)
An Introduction to eScience and the Grid by Prof. Richard Sinnott.
Sinnott Paper
Sinnott Paper
Johanna Green
Science Europe LEGS Committee: Career Pathways in Multidisciplinary Research: How to Assess the Contributions of Single Authors in Large Teams, 1-2 Dec 2015, Brussels The People Behind Research Software crediting from the informatics, technical point of view
Crediting informatics and data folks in life science teams
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Carole Goble
Unconference on Software Sustainability in Denmark (Novo Nordisk Foundation) 25-26 March 2019, Favrholm Campus, Hillerod
Better Software, Better Research
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An introduction to Research Data Management and Data Sharing given via webinar for Diponegoro University, Indonesia
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The goal of this talk is to highlight open source opportunities for students especially through an opportunity to earn $5000 through Google Summer of Code program. I will discuss some of the tips on how to engage with open source communities, the befits for contributing. I will provide motivating examples on how students can gain significant experience in contributing challenging distributed systems problems while impacting scientific research. I will specifically focus with a concrete example of Apache Airavata software suite for Web-based science gateways. I will list some example GSoC topics of interest and provide some recipes for success in getting accepted and navigating through success.
Learning Open Source through GSOC
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smarru
RDA Plenary 4 - BoF on Sustainability - my experience with ISA tools
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RDA BoF on Sustainability - my experience with ISA tools
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Slides that accompanied a talk given to undergraduate biologists and computer scientists.
Code for science (rev 1)
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Andy Lenards
Metadata and Semantics Research Conference, Manchester, UK 2015 Research Objects: why, what and how, In practice the exchange, reuse and reproduction of scientific experiments is hard, dependent on bundling and exchanging the experimental methods, computational codes, data, algorithms, workflows and so on along with the narrative. These "Research Objects" are not fixed, just as research is not “finished”: codes fork, data is updated, algorithms are revised, workflows break, service updates are released. Neither should they be viewed just as second-class artifacts tethered to publications, but the focus of research outcomes in their own right: articles clustered around datasets, methods with citation profiles. Many funders and publishers have come to acknowledge this, moving to data sharing policies and provisioning e-infrastructure platforms. Many researchers recognise the importance of working with Research Objects. The term has become widespread. However. What is a Research Object? How do you mint one, exchange one, build a platform to support one, curate one? How do we introduce them in a lightweight way that platform developers can migrate to? What is the practical impact of a Research Object Commons on training, stewardship, scholarship, sharing? How do we address the scholarly and technological debt of making and maintaining Research Objects? Are there any examples I’ll present our practical experiences of the why, what and how of Research Objects.
Mtsr2015 goble-keynote
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Presentation given at the IATUL Conference, Purdue University in June 2010.
Acting as Advocate? Seven steps for libraries in the data decade
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Project On-Science
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Amrit Ravi
A 5-minute flash session (timed 15 secs/slide) presented by Richard Kidd at the STM Innovation Seminar 2011.
2011-12-02 Open PHACTS at STM Innovation
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open_phacts
BioTIFF: An Articulated and Self-Documenting Electronic Personal Health Recor...
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Mercer bosc2010 microsoft_framework
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In 2012, the University of Idaho Library began implementing VIVO, an open-source Semantic Web application, both as a discovery layer for its fledgling institutional repository and as a database to describe, visualize, and report university research activity. The presenters will detail some of the challenges they encountered developing this resource, while discussing the tools and techniques they used for obtaining, editing, and uploading institutional data into the RDF-based VIVO system.
VIVO at the University of Idaho
VIVO at the University of Idaho
anniegaines
The Research Software Alliance (ReSA) and the Netherlands eScience Center hosted a two-day international workshop to set the future agenda for national and international funders to support sustainable research software. As the importance of software in research has become increasingly apparent, so has the urgent need to sustain it. Funders can play a crucial role in this respect by ensuring structural support. Over the past few years, a variety of methods for sustaining research software have been explored, including improving and extending funding policies and instruments. During the workshop, funding organizations joined forces to explore how they can effectively contribute to making research software sustainable. This keynote helped frame the discussion from the perspective of community involvement in research software sustainability. https://future-of-research-software.org/ this talk is available at Goble, Carole. (2022, November 8). Research Software Sustainability takes a Village. International funders workshop, The Future of Research Software, Amsterdam, The Netherlands. Zenodo. https://doi.org/10.5281/zenodo.7304596
Research Software Sustainability takes a Village
Research Software Sustainability takes a Village
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Code for science (rev 2)
Code for science (rev 2)
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Bryan Gorman's presentation to Government 2.0 Boot Camp
Sensorpedia
Sensorpedia
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Keynote on software sustainability given at the 2nd Annual Netherlands eScience Symposium, November 2014. Based on the article Carole Goble , Better Software, Better Research Issue No.05 - Sept.-Oct. (2014 vol.18) pp: 4-8 IEEE Computer Society http://www.computer.org/csdl/mags/ic/2014/05/mic2014050004.pdf http://doi.ieeecomputersociety.org/10.1109/MIC.2014.88 http://www.software.ac.uk/resources/publications/better-software-better-research
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Similaire à ITK Tutorial Presentation Slides-943
(20)
Ilik - Beyond the Manuscript: Using IRs for Non Traditional Content Types
Ilik - Beyond the Manuscript: Using IRs for Non Traditional Content Types
Sinnott Paper
Sinnott Paper
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Better Software, Better Research
Better Software, Better Research
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Intro to RDM
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RDA BoF on Sustainability - my experience with ISA tools
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ITK Tutorial Presentation Slides-943
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The Insight Software
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