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@DBCLS 2012/3/18 RA : meguu
•  meguu
     • 
     • 
     • 
     •  2010 4




•         …      •  twitter       RA
                              …
•          chalkless
•  i_87
•  meguu
DBCLS                    …
                         SRAs
•  http://sra.dbcls.jp
DBCLS                    …
                          SRAs
 •  http://sra.dbcls.jp




• 
     -
http://www.ncbi.nlm.nih.gov/sra/


                            PubMed Central                SRA (NCBI)
                              (        )
     PubMed            http://www.ncbi.nlm.nih.gov/pmc/                        DRA (DDBJ)
(                  )
                                                                      http://trace.ddbj.nig.ac.jp/dra/
    http://www.ncbi.nlm.nih.gov/pubmed/



                                                            ENA (EBI)
                                                             http://www.ebi.ac.uk/ena/
PubMed (NCBI)…
PubMed Central (NCBI)…
ID
    •                               ID


         ID: 1            ID:A
                                 gehugehu                   ID:
          hogehoge
          PMC    A            PubMed Central   SRA (NCBI)
                                (        )
         PubMed                                             DRA (DDBJ)
(                    )



                                                ENA (EBI)

PubMed (NCBI)…
PubMed Central (NCBI)…
ID



    ID: 1            ID:A
                            ID   hogehoge                ID:
     PMC    A                                             PM:1
      ID:                PubMed Central     SRA (NCBI)
                           (        )
    PubMed                                               DRA (DDBJ)
(               )



                                             ENA (EBI)

PubMed (NCBI)…
PubMed Central (NCBI)…
ID



    ID: 1            ID:A
                            ID   hogehoge                ID:
     PMC    A                                             PM:1
      ID:                PubMed Central     SRA (NCBI)
                           (        )
    PubMed                                               DRA (DDBJ)
(               )



                                             ENA (EBI)

PubMed (NCBI)…
PubMed Central (NCBI)…
PMID…PubMed ID
Article Title…
Journal Vol Issue Page…
Date…
SRA ID…                   ID
SRA Title…
PMID…PubMed ID
Article Title…
Journal Vol Issue Page…
Date…
SRA ID…                   ID
SRA Title…
(PubMed ID)                  PubMed MeSH

                                                                    …
    DRA (DDBJ)               …      High-Throughput Nucleotide Sequencing[MeSH]

                               …
   - illumina
   - 454 Life Sciences
                                   ID
   - Applied Biosystems
                                           [SED]R[APXSR][0-9]+
                    EFetch

PubMed
                      EFetch

  PubMed Central
EFetch NCBI
                  (PubMed ID)
                                                 XML
                                         : http://eutils.ncbi.nlm.nih.gov/
    DRA (DDBJ)               …

                               …
   - illumina
   - 454 Life Sciences
                                   ID
   - Applied Biosystems
                                         [SED]R[APXSR][0-9]+
                    EFetch

PubMed
                      EFetch

  PubMed Central
: NCBI        …

                                            EFetch NCBI
                  (PubMed ID)
                                                              XML
                                                      : http://eutils.ncbi.nlm.nih.gov/
    DRA (DDBJ)               …

                               …
   - illumina
   - 454 Life Sciences
                                            ID
   - Applied Biosystems
                                                       [SED]R[APXSR][0-9]+
                    EFetch

PubMed
                      EFetch
                                                 Efetch                                 …
  PubMed Central                                 this article does not allow downloading...!
…
http://lifesciencedb.jp/
http://lifesciencedb.jp/
http://lifesciencedb.jp/lab/
http://sra.dbcls.jp
DBCLS SRA
…




        …
#
…




DBCLS RA

           …
DBCLS RA




             SS




           Twitter   …

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AJACS25

  • 2. •  meguu •  •  •  •  2010 4 •  … •  twitter RA …
  • 3. •  chalkless •  i_87 •  meguu
  • 4. DBCLS … SRAs •  http://sra.dbcls.jp
  • 5. DBCLS … SRAs •  http://sra.dbcls.jp •  -
  • 6. http://www.ncbi.nlm.nih.gov/sra/ PubMed Central SRA (NCBI) ( ) PubMed http://www.ncbi.nlm.nih.gov/pmc/ DRA (DDBJ) ( ) http://trace.ddbj.nig.ac.jp/dra/ http://www.ncbi.nlm.nih.gov/pubmed/ ENA (EBI) http://www.ebi.ac.uk/ena/ PubMed (NCBI)… PubMed Central (NCBI)…
  • 7. ID •  ID ID: 1 ID:A gehugehu ID: hogehoge PMC A PubMed Central SRA (NCBI) ( ) PubMed DRA (DDBJ) ( ) ENA (EBI) PubMed (NCBI)… PubMed Central (NCBI)…
  • 8. ID ID: 1 ID:A ID hogehoge ID: PMC A PM:1 ID: PubMed Central SRA (NCBI) ( ) PubMed DRA (DDBJ) ( ) ENA (EBI) PubMed (NCBI)… PubMed Central (NCBI)…
  • 9. ID ID: 1 ID:A ID hogehoge ID: PMC A PM:1 ID: PubMed Central SRA (NCBI) ( ) PubMed DRA (DDBJ) ( ) ENA (EBI) PubMed (NCBI)… PubMed Central (NCBI)…
  • 10. PMID…PubMed ID Article Title… Journal Vol Issue Page… Date… SRA ID… ID SRA Title…
  • 11. PMID…PubMed ID Article Title… Journal Vol Issue Page… Date… SRA ID… ID SRA Title…
  • 12. (PubMed ID) PubMed MeSH … DRA (DDBJ) … High-Throughput Nucleotide Sequencing[MeSH] … - illumina - 454 Life Sciences ID - Applied Biosystems [SED]R[APXSR][0-9]+ EFetch PubMed EFetch PubMed Central
  • 13. EFetch NCBI (PubMed ID) XML : http://eutils.ncbi.nlm.nih.gov/ DRA (DDBJ) … … - illumina - 454 Life Sciences ID - Applied Biosystems [SED]R[APXSR][0-9]+ EFetch PubMed EFetch PubMed Central
  • 14. : NCBI … EFetch NCBI (PubMed ID) XML : http://eutils.ncbi.nlm.nih.gov/ DRA (DDBJ) … … - illumina - 454 Life Sciences ID - Applied Biosystems [SED]R[APXSR][0-9]+ EFetch PubMed EFetch Efetch … PubMed Central this article does not allow downloading...!
  • 15.
  • 16.
  • 22. … #
  • 24. DBCLS RA SS Twitter …