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Microbiology: A Clinical Approach © Garland Science
 The most important problem associated with
infectious disease today is the rapid development
of resistance to antibiotics.
 It will force us to change the way we view
disease and the way we treat patients.
 Antibiotics’ use has not been without
consequence.
 There are several factors in the development of
antibiotic resistance:
› Considerable potential for rapid spontaneous mutation
› Some of these mutations are for antibiotic resistance
› These mutations are selected for certain antibiotics.
 Bacterial cells that have developed resistance are
not killed off.
› They continue to divide
› Resulting in a completely resistant population.
 Mutation and evolutionary pressure cause a rapid
increase in resistance to antibiotics.
 Modern technology and sociology can further
aggravate the development of resistant strains.
› Travelers carry resistant bacteria.
 They travel with several or many other people.
› Other people are infected with the resistant bacteria.
 These people continue traveling and infecting.
› The process is repeated and the resistant bacteria
spread.
 There are more large cities in the world today.
› Large numbers of people in relatively small areas
› Passing antibiotic-resistant pathogens is easier.
› Many large urban populations have poor sanitation.
 Food is also a source of infection that could
affect the development of resistance.
› More meals are prepared outside the home.
› Contamination goes unnoticed until infection has
started.
 Outbreaks of Escherichia coli O157 in spinach and
lettuce in the US.
› As the number of foodborne infections increases, so
does the use of antibiotics.
 Causes an increase in the development of resistance.
 An important social change is the increase in the
number of people who are immunocompromised.
› Necessitates increased use of antibiotics
› Fosters development of resistance
 Emerging and re-emerging diseases are another
source for resistance.
› Emerging diseases have not been seen before.
› Re-emerging are caused by organisms resistant to
treatment.
 The clinical success of antibiotics led to:
› Increasing efforts to discover new antibiotics.
› Modification of existing drugs.
› Development of antibiotics with broader spectra.
 Effort is now targeted towards overcoming
strains resistant to current antibiotics.
 Resistance develops at different rates.
› Several groups of antibiotics were used for many
years before resistance was seen.
› Resistance to penicillin was seen in only three years.
› Some semi-synthetic forms of penicillin (ampicillin)
had a relatively long time before resistance developed.
› Other semi-synthetic forms (methicillin) lasted only a
year before resistance developed.
 Short interval is directly related to increased use.
 The therapeutic life span of a drug is based on
how quickly resistance develops.
 The more an antibiotic is used, the more quickly
resistance occurs.
 The most important contributing factor for
resistance is overuse.
› A good example is prescribing antibiotics that don’t
kill viruses for the common cold.
› These antibiotics do destroy the normal flora.
› Opportunistic pathogens that are resistant survive and
can take hold.
 Hospitals are ideal reservoirs for the acquisition
of resistance.
› A population of people with compromised health
› A high concentration of organisms, many of which are
extremely pathogenic
› Large amounts of different antibiotics are constantly
in use
 Increased use of antibiotics leads to resistance.
› Hospital is a place where resistance can develop
rapidly.
 Resistance can be transferred by bacteria
swapping genes.
› This can be easily accomplished in a hospital setting.
› Health care workers who don’t follow infection
control protocols aid in increasing resistance.
 Plasmids containing genes for resistance can
integrate into the chromosome.
› Here they form resistance islands.
› Resistance genes accumulate and are stably
maintained.
 Microorganisms producing antibiotic substances
have autoprotective mechanisms.
› Transmembrane proteins pump out the freshly
produced antibiotic so that it does not accumulate.
 If it did, it would kill the organism producing it.
 Bacteria use several mechanisms to become
antibiotic-resistant:
› Inactivation of the antibiotic
› Efflux pumping of the antibiotic
› Modification of the antibiotic target
› Alteration of the pathway
 Inactivation involves enzymatic breakdown of
antibiotic molecules.
 A good example is β-lactamase:
› Secreted into the bacterial periplasmic space
› Attacks the antibiotic as it approaches its target
› There are more than 190 forms of β-lactamase.
› E.g of lactamase activity in E.coli and S. aureus
 Efflux pumping is an active transport mechanism.
› It requires ATP.
 Efflux pumps are found in:
› The bacterial plasma membrane
› The outer layer of gram-negative organisms
 Pumping keeps the concentration of antibiotic below
levels that would destroy the cell
 Genes that code for efflux pumps are located on
plasmids and transposons.
 Transposons are sequences of DNA that can move or
transpose move themselves to new positions within
the genome of a single cell.
 Some bacteria reduce the permeability of their
membranes as a way of keeping antibiotics out.
› They turn off production of porin and other membrane
channel proteins.
› Seen in resistance to streptomycin, tetracycline, and
sulfa drugs.
 Bacteria can modify the antibiotic’s target to
escape its activity
 Bacteria must change structure of the target but
the modified target must still be able to function.
This can be achieved in two ways:
› Mutation of the gene coding for the target protein
› Importing a gene that codes for a modified target
› E.g. with MRSA (methicillin- resistant - S. aureus ),
similar to PBP (penicillin- binding- protein)
 MRSA is resistant to all β-lactam antibiotics,
cephalosporins, and carbapenems.
› It is a very dangerous pathogen particularly in burn
patients
 Streptococcus pneumoniae also modifies PBP.
› It can make as many as five different types of PBP.
› It does this by rearranging, or shuffling, the genes.
 Referred to as genetic plasticity
 Permits increased resistance
 Bacterial ribosomes are a primary target for
antibiotics
› Different antibiotics affect them in different ways.
 Resistance can be the result of modification of
ribosomal RNA so it is no longer sensitive.
 Some organisms use target modification in
conjunction with efflux pumps.
› Resistance is even more effective.
 Some drugs competitively inhibit metabolic
pathways.
 Bacteria can overcome this method by using an
alternative pathway.
 Approximately 7% of the total S. aureus genome
is genes for antibiotic resistance.
 The doctor-patient-drug relationship leads to
resistance.
› Most clearly seen in the case of common viral
infections.
› Patients expect to have antibiotics have prescribed.
› There is overprescription of antibiotics that are not
required.
› Patients who feel better and stop using the drug make
the problem worse.
 Overuse of broad-spectrum antibiotics
(cephalosporins) leads to the rise of resistance.
› It permits the superinfection effect.
 Pathogens occupy areas where normal microbes have
been killed.
 Antibiotics have essentially compromised the patient.
 Clostridium difficile is a superinfection pathogen.
› Establishes itself in the intestinal tract as part of a
superinfection
› It is very resistant to antibiotics.
› Patients with this infection are difficult to treat
 The potential for global antibiotic resistance is
real due to:
› Overuse of antibiotics
› Improper adherence to hospital infection control
protocols
› Difficulty finding new antibiotics
› Ease of worldwide travel
 There are ways to lengthen the useful life of
antibiotics.
Antibiotic resistance

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Antibiotic resistance

  • 1. Microbiology: A Clinical Approach © Garland Science
  • 2.  The most important problem associated with infectious disease today is the rapid development of resistance to antibiotics.  It will force us to change the way we view disease and the way we treat patients.
  • 3.
  • 4.  Antibiotics’ use has not been without consequence.  There are several factors in the development of antibiotic resistance: › Considerable potential for rapid spontaneous mutation › Some of these mutations are for antibiotic resistance › These mutations are selected for certain antibiotics.
  • 5.  Bacterial cells that have developed resistance are not killed off. › They continue to divide › Resulting in a completely resistant population.  Mutation and evolutionary pressure cause a rapid increase in resistance to antibiotics.
  • 6.
  • 7.  Modern technology and sociology can further aggravate the development of resistant strains. › Travelers carry resistant bacteria.  They travel with several or many other people. › Other people are infected with the resistant bacteria.  These people continue traveling and infecting. › The process is repeated and the resistant bacteria spread.
  • 8.  There are more large cities in the world today. › Large numbers of people in relatively small areas › Passing antibiotic-resistant pathogens is easier. › Many large urban populations have poor sanitation.
  • 9.  Food is also a source of infection that could affect the development of resistance. › More meals are prepared outside the home. › Contamination goes unnoticed until infection has started.  Outbreaks of Escherichia coli O157 in spinach and lettuce in the US. › As the number of foodborne infections increases, so does the use of antibiotics.  Causes an increase in the development of resistance.
  • 10.  An important social change is the increase in the number of people who are immunocompromised. › Necessitates increased use of antibiotics › Fosters development of resistance
  • 11.  Emerging and re-emerging diseases are another source for resistance. › Emerging diseases have not been seen before. › Re-emerging are caused by organisms resistant to treatment.
  • 12.
  • 13.  The clinical success of antibiotics led to: › Increasing efforts to discover new antibiotics. › Modification of existing drugs. › Development of antibiotics with broader spectra.  Effort is now targeted towards overcoming strains resistant to current antibiotics.
  • 14.  Resistance develops at different rates. › Several groups of antibiotics were used for many years before resistance was seen. › Resistance to penicillin was seen in only three years. › Some semi-synthetic forms of penicillin (ampicillin) had a relatively long time before resistance developed. › Other semi-synthetic forms (methicillin) lasted only a year before resistance developed.  Short interval is directly related to increased use.
  • 15.  The therapeutic life span of a drug is based on how quickly resistance develops.  The more an antibiotic is used, the more quickly resistance occurs.
  • 16.
  • 17.  The most important contributing factor for resistance is overuse. › A good example is prescribing antibiotics that don’t kill viruses for the common cold. › These antibiotics do destroy the normal flora. › Opportunistic pathogens that are resistant survive and can take hold.
  • 18.  Hospitals are ideal reservoirs for the acquisition of resistance. › A population of people with compromised health › A high concentration of organisms, many of which are extremely pathogenic › Large amounts of different antibiotics are constantly in use  Increased use of antibiotics leads to resistance. › Hospital is a place where resistance can develop rapidly.
  • 19.  Resistance can be transferred by bacteria swapping genes. › This can be easily accomplished in a hospital setting. › Health care workers who don’t follow infection control protocols aid in increasing resistance.
  • 20.  Plasmids containing genes for resistance can integrate into the chromosome. › Here they form resistance islands. › Resistance genes accumulate and are stably maintained.
  • 21.  Microorganisms producing antibiotic substances have autoprotective mechanisms. › Transmembrane proteins pump out the freshly produced antibiotic so that it does not accumulate.  If it did, it would kill the organism producing it.
  • 22.  Bacteria use several mechanisms to become antibiotic-resistant: › Inactivation of the antibiotic › Efflux pumping of the antibiotic › Modification of the antibiotic target › Alteration of the pathway
  • 23.  Inactivation involves enzymatic breakdown of antibiotic molecules.  A good example is β-lactamase: › Secreted into the bacterial periplasmic space › Attacks the antibiotic as it approaches its target › There are more than 190 forms of β-lactamase. › E.g of lactamase activity in E.coli and S. aureus
  • 24.  Efflux pumping is an active transport mechanism. › It requires ATP.  Efflux pumps are found in: › The bacterial plasma membrane › The outer layer of gram-negative organisms  Pumping keeps the concentration of antibiotic below levels that would destroy the cell  Genes that code for efflux pumps are located on plasmids and transposons.  Transposons are sequences of DNA that can move or transpose move themselves to new positions within the genome of a single cell.
  • 25.  Some bacteria reduce the permeability of their membranes as a way of keeping antibiotics out. › They turn off production of porin and other membrane channel proteins. › Seen in resistance to streptomycin, tetracycline, and sulfa drugs.
  • 26.  Bacteria can modify the antibiotic’s target to escape its activity  Bacteria must change structure of the target but the modified target must still be able to function. This can be achieved in two ways: › Mutation of the gene coding for the target protein › Importing a gene that codes for a modified target › E.g. with MRSA (methicillin- resistant - S. aureus ), similar to PBP (penicillin- binding- protein)
  • 27.  MRSA is resistant to all β-lactam antibiotics, cephalosporins, and carbapenems. › It is a very dangerous pathogen particularly in burn patients  Streptococcus pneumoniae also modifies PBP. › It can make as many as five different types of PBP. › It does this by rearranging, or shuffling, the genes.  Referred to as genetic plasticity  Permits increased resistance
  • 28.  Bacterial ribosomes are a primary target for antibiotics › Different antibiotics affect them in different ways.  Resistance can be the result of modification of ribosomal RNA so it is no longer sensitive.  Some organisms use target modification in conjunction with efflux pumps. › Resistance is even more effective.
  • 29.  Some drugs competitively inhibit metabolic pathways.  Bacteria can overcome this method by using an alternative pathway.  Approximately 7% of the total S. aureus genome is genes for antibiotic resistance.
  • 30.  The doctor-patient-drug relationship leads to resistance. › Most clearly seen in the case of common viral infections. › Patients expect to have antibiotics have prescribed. › There is overprescription of antibiotics that are not required. › Patients who feel better and stop using the drug make the problem worse.
  • 31.  Overuse of broad-spectrum antibiotics (cephalosporins) leads to the rise of resistance. › It permits the superinfection effect.  Pathogens occupy areas where normal microbes have been killed.  Antibiotics have essentially compromised the patient.
  • 32.  Clostridium difficile is a superinfection pathogen. › Establishes itself in the intestinal tract as part of a superinfection › It is very resistant to antibiotics. › Patients with this infection are difficult to treat
  • 33.
  • 34.  The potential for global antibiotic resistance is real due to: › Overuse of antibiotics › Improper adherence to hospital infection control protocols › Difficulty finding new antibiotics › Ease of worldwide travel  There are ways to lengthen the useful life of antibiotics.