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Preclinical Development, an
                                overview:
                          do we need a change?



                                                                            Carolina Salcedo, PhD
                                                                  Director Pharmacology, SANIFIT
                                                                                  JORNADA TOX®
                                                                  Barcelona, 1 de febrer de 2013
                                                                                         CERETOX
         Photo: Can open innovation close the pharma productivity gap? By John McCulloch @ MaRS June 7, 2011
- Confidential -                                                                                               1
Drug Discovery and Development

      Target                   Lead
                                             Candidate            Preclinical         Clinical
   Discovery          selection and                                                              Registration
                                              selection        Development              Trials
                       optimization

          From 1000nds to 1-3                                 1-3                          1



                   3-5 years    400 M $

                                                          1 year
                                                                                5-7 year         1B$


                                                                                     5-7 years
                                                    JORNADA TOX®
- Confidential -                      (Barcelona, 1 de febrer de 2013 - CERETOX)                      2
Preclinical Development

         Preclinical Package

         1. Chemistry, manufacturing and controls
            (CMC)
         2. Efficacy
         3. Safety
         4. Toxicology
         5. ADME & PK
         6. Documentation : IB + IMPD

                                      JORNADA TOX®
- Confidential -        (Barcelona, 1 de febrer de 2013 - CERETOX)   3
Preclinical Development
                       Candidate                       Preclinical                   Clinical
                        selection                   Development                Development


  Exploratory toxicology            Regulatory toxicology
  Exploratory safety                Regulatory safety


 Predict toxic/safety concerns              Provide a safety margin
 Select a candidate               Define the dose/concentration to start
                                    human trials (NOAEL)
 Help in next step study designs
                                   Define max dose/concentration to be
                                                 dosed in humans
                                             Target organs/ Rescue treatments
                                             JORNADA TOX®
                                               Obtain regulatory approval of clinical
  - Confidential -                  (Barcelona, 1 de febrer de(IB, IMPD)                   4
                                                   studies 2013 - CERETOX)
Critical tasks
                             Candidate                            Preclinical                                  Clinical
                              selection                        Development                               Development

Exploratory toxicology                     Regulatory toxicology
General toxicity in                        Repeated dose toxicity
silico/ in vitro
                                           Genotoxicity
Preliminar genotoxicity
            Preliminary toxicity           Local tolerance
            in vivo                                       Immunotoxicity
                                                                                   Reproductive/juvenile tox.

                                                          Additional/follow-up studies              Carcinogenicity


Exploratory safety                         Regulatory safety
Off-target binding profile                 CNS
Preliminary CV safety                      Cardiovascular              Follow-up studies
Preliminary CNS safety
                                           Respiratory
                                                         Additional studies
                                                        JORNADA TOX®
- Confidential -                          (Barcelona, 1 de febrer de 2013 - CERETOX)                                  5
Exploratory toxicology&safety
     Toxicology    Assay                             Safety         Assay
     General Tox   Citotox                           General        Off -targets
                   Glutathion Depletion              QT             hERG
                   Phospholipidosis                                 Purkinge
                   Phototox                                         Guinea Pig ECG
     Genotox       Ames                              CNS            Irwin
                   Micronucleus                      Others?        Renal, GI
     Special Tox   LLNA
                   Topical irritation
     In vivo       Acute Tox
                   Repeated Dose Tox
     Others        Zebrafish
     In silico     DEREK, TOPAK,
                   OncoLogic, CASE
                                     JORNADA TOX®
- Confidential -                                                                     6
                       (Barcelona, 1 de febrer de 2013 - CERETOX)
Regulatory safety&toxicology
   EMA/FDA ICH guidelines:
     • Guidelines are not recipes!
     • Tailored to your compound
      M3
      S1- Carcinogenicity
      S2 - Genotoxicity
      S3- Toxicokinetics /PK
      S4- Duration of chronc testing in animals
      S5 -Reprotoxicity
      S6 -Biotechnology
      S7- Safety Pharmacology /QT
      S8- Immunotoxicology
                                         Toni Guzman !!!

                                  JORNADA TOX®
- Confidential -    (Barcelona, 1 de febrer de 2013 - CERETOX)   7
Regulatory safety&toxicology
    The toxicological development plan depends on:
    • Design of the clinical trial that will be supported:
      duration, population
    • Administration route
    • Therapeutic indication
    • Pharmacological target
    • Exposure / Metabolism
    The toxicological development plan need to answer:
    • What is the maximal dose without adverse effects?
    • What are the main targets of toxicity ?
    • Are the effects reversible ? Monitorable ?
                                     JORNADA TOX®
- Confidential -       (Barcelona, 1 de febrer de 2013 - CERETOX)   8
Regulatory safety&toxicology
Are differences really due to the treatment?
   • Dose response (and exposure response!)
   • Consistency between sexes (not necessarily!)
   • Consistency with other parameters and other available studies
   • Artifacts possible?
   • Anomalous values in vehicle group?
If they are related to the treatment, are they adverse?
     • Exaggerated pharmacology or off-target effect?
     • Magnitude of the difference compared to physiological range.
     • Direct versus indirect effects. Feedback response effects. Stress-related
           effects.

If they are adverse, are they relevant to humans???
                                       JORNADA TOX®
- Confidential -         (Barcelona, 1 de febrer de 2013 - CERETOX)           9
Safety margin
                                                               28d   28d      Rat      Dog      Rat                      Human
                       In vitro    Cell      Animal   Animal   Rat No rodent Resp     Cardio    CNS       Off-    hERG    Active   Ph I
                                  activity   Model    Model    Tox   Tox     safety   Safety   safety   targets          (Pred)
                 105




                                                                                                                                             MLD

                 104                                                                                                                         LOAEL

                                                                                                                                             NOAEL
Concentration (nM)*




                 103



                                              EC50
                                                       ID50
                                    IC50
                 102
                                                                                                                          HEC
                                                                                                                                    Good
                                                                                                                                    Tol &
                        IC50        pA2                                                                                            Biomark

                         Kd
                 101
                                                                    JORNADA TOX®
       - Confidential -                               (Barcelona, 1 de febrer de 2013 - CERETOX)
Estimation of dose for FIH
 If they are adverse, are they relevant to humans???
 Monitorable, Reversible (Rescue treatment)

 Jumping into human doses:
 FDA Guidance for Industry: Estimating the Maximum Safe
 Starting Dose in Initial Clinical Trials for Therapeutics in Adult
 Healthy Volunteers

        • Establish HED/MRSD based on NOAEL/MABEL
        • Apply safety margin
        • Define a escalation range


                                       JORNADA TOX®
- Confidential -         (Barcelona, 1 de febrer de 2013 - CERETOX)   11
However….are we doing well?
Jonathan Hitchcock, 2003 Pfizer




                                           JORNADA TOX®
 - Confidential -            (Barcelona, 1 de febrer de 2013 - CERETOX)   12
The Attrition Problem
  Pedro Cuatrecases, Drug discovery in jeopardy, 2006

      • Productivity 1-2 drugs/10 reach market
      • Budgets increase x30 since 1970 ($5billion
        /year)
      • Revolutionary scientific advances in last 20
        years, offering new and innovative
        opportunities

                                     JORNADA TOX®
- Confidential -       (Barcelona, 1 de febrer de 2013 - CERETOX)   13
The Attrition Problem
 Angela Dunne, GSK, 2011

 The attrition rate for drug discovery programs from target to
 clinic is unacceptably high
 –Causes a lack of new medicines to treat diseases of high unmet need
 –Results in inefficiency of drug discovery organizations, requiring large target
 portfolios to ensure sufficient medicine output

 Significant contributors to attrition post-candidate are lack of
 efficacy and/or toxicity
 –Deployment of more physiological screens earlier in the drug discovery
 process should make a significant impact in the overall attrition rate



                                         JORNADA TOX®
- Confidential -           (Barcelona, 1 de febrer de 2013 - CERETOX)           14
The Attrition Problem
Jim Kling, MSN Health & Fitness
FDA agency failed to catch serious side effects in a number of drugs before
they were approved, thus forcing embarrassing withdrawals
                   Drug Company    Indication            Why                              Expiration date
                   Vioxx           Painkiller            CV events                        2004
                   Merck
                   Bextra          Painkiller            CV events                        2005
                   Pfizer
                   Zelnorm         IBS                   Heart problems                   2007
                   Novartis
                   Tysabri         MS                    Progressive multifocal           2005
                   Biogen Idec                           leukoencephalopathy
                   Neurospec       Appendicities         Life-threating side effects      2005
                   Palatin Thec.   diagnosis
                   Cylert          ADHA                  Liver failure                    2005
                   Abbot
                   Permax          Parkinson             Blood backlow to aortic valves   2007
                   Valentant
                   Baycol          Cholesterol           Fatal rhabdomyolysis             2001
                   Bayer
                   Palladone       Narcotic painkiller   Sever effecst when taken with    2005
                   Purde Pharma                          alcohol

                                                  JORNADA TOX®
- Confidential -                    (Barcelona, 1 de febrer de 2013 - CERETOX)                              15
The Attrition Problem: reasons (I)
      • Patient population is heterogeneous. Differ at
        genetic level with regard to drug transport,
        metabolism, expression of disease, etc
      • Early testing using tissues, cells, are just partially
        predictive.
      • Preclinical testing in animals models is modestly
        predictive of effects in humans
      • To many repeats, mainly in Discovery
      • Marketing
      • Management
                                     JORNADA TOX®
- Confidential -       (Barcelona, 1 de febrer de 2013 - CERETOX)   16
On track?
                         Candidate                           Preclinical                          Clinical
                          selection                       Development                       Development
Challenges                                                            Opportunities
Increasing predictability and regulatory acceptance                   Creating entirely new therapeutic
                                                                      approaches (gene therapy,
of in silico / in vitro methods                                       antibody therapy, stem cells).
Adding more knowledge to the drug discovery
process, so as to make success more certain :
                                                                      Pharmacogenomics–Drugs and
                                                                      dosage chosen based on genetic
       Genomics, proteomics, metabonomics
                                                                      composition –‘personalised medicine
       Molecular toxicology
       Transgenic animal models
       Biomarkers                                                     Help pharmaceutical companies
       Bioinformatics                                                 to get their programmes to fail
The only way to reduce costs and reduce time                          efficiently
to launch is by reducing repeats, at any stage.

  - Confidential -                                  JORNADA TOX®                                     17
                                      (Barcelona, 1 de febrer de 2013 - CERETOX)
On track !
 1. Olson H, 2000 : survey from 12 pharmaceutical companies with data
    compiled from 150 compounds with 221 Human Toxicity (HT) events
    reported. Positive HT concordance rate of 71% for rodent and
    nonrodent species

 2. 1991- 40% of attrition was due to poor PK/BA
    Implementation of sophisticated panels of early in vitro ADME
    2000 – a reduction to 10%

 3. Fresh from the biotech pipeline 2011 (Jim Klings):
    Drugs approvals were up in 2011, reversing the trend, thanks to
    biologics

                                     JORNADA TOX®
- Confidential -       (Barcelona, 1 de febrer de 2013 - CERETOX)     18

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Preclinical development (C. Salcedo)

  • 1. Preclinical Development, an overview: do we need a change? Carolina Salcedo, PhD Director Pharmacology, SANIFIT JORNADA TOX® Barcelona, 1 de febrer de 2013 CERETOX Photo: Can open innovation close the pharma productivity gap? By John McCulloch @ MaRS June 7, 2011 - Confidential - 1
  • 2. Drug Discovery and Development Target Lead Candidate Preclinical Clinical Discovery selection and Registration selection Development Trials optimization From 1000nds to 1-3 1-3 1 3-5 years 400 M $ 1 year 5-7 year 1B$ 5-7 years JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 2
  • 3. Preclinical Development Preclinical Package 1. Chemistry, manufacturing and controls (CMC) 2. Efficacy 3. Safety 4. Toxicology 5. ADME & PK 6. Documentation : IB + IMPD JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 3
  • 4. Preclinical Development Candidate Preclinical Clinical selection Development Development Exploratory toxicology Regulatory toxicology Exploratory safety Regulatory safety  Predict toxic/safety concerns  Provide a safety margin  Select a candidate  Define the dose/concentration to start human trials (NOAEL)  Help in next step study designs  Define max dose/concentration to be dosed in humans  Target organs/ Rescue treatments  JORNADA TOX® Obtain regulatory approval of clinical - Confidential - (Barcelona, 1 de febrer de(IB, IMPD) 4 studies 2013 - CERETOX)
  • 5. Critical tasks Candidate Preclinical Clinical selection Development Development Exploratory toxicology Regulatory toxicology General toxicity in Repeated dose toxicity silico/ in vitro Genotoxicity Preliminar genotoxicity Preliminary toxicity Local tolerance in vivo Immunotoxicity Reproductive/juvenile tox. Additional/follow-up studies Carcinogenicity Exploratory safety Regulatory safety Off-target binding profile CNS Preliminary CV safety Cardiovascular Follow-up studies Preliminary CNS safety Respiratory Additional studies JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 5
  • 6. Exploratory toxicology&safety Toxicology Assay Safety Assay General Tox Citotox General Off -targets Glutathion Depletion QT hERG Phospholipidosis Purkinge Phototox Guinea Pig ECG Genotox Ames CNS Irwin Micronucleus Others? Renal, GI Special Tox LLNA Topical irritation In vivo Acute Tox Repeated Dose Tox Others Zebrafish In silico DEREK, TOPAK, OncoLogic, CASE JORNADA TOX® - Confidential - 6 (Barcelona, 1 de febrer de 2013 - CERETOX)
  • 7. Regulatory safety&toxicology EMA/FDA ICH guidelines: • Guidelines are not recipes! • Tailored to your compound M3 S1- Carcinogenicity S2 - Genotoxicity S3- Toxicokinetics /PK S4- Duration of chronc testing in animals S5 -Reprotoxicity S6 -Biotechnology S7- Safety Pharmacology /QT S8- Immunotoxicology Toni Guzman !!! JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 7
  • 8. Regulatory safety&toxicology The toxicological development plan depends on: • Design of the clinical trial that will be supported: duration, population • Administration route • Therapeutic indication • Pharmacological target • Exposure / Metabolism The toxicological development plan need to answer: • What is the maximal dose without adverse effects? • What are the main targets of toxicity ? • Are the effects reversible ? Monitorable ? JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 8
  • 9. Regulatory safety&toxicology Are differences really due to the treatment? • Dose response (and exposure response!) • Consistency between sexes (not necessarily!) • Consistency with other parameters and other available studies • Artifacts possible? • Anomalous values in vehicle group? If they are related to the treatment, are they adverse? • Exaggerated pharmacology or off-target effect? • Magnitude of the difference compared to physiological range. • Direct versus indirect effects. Feedback response effects. Stress-related effects. If they are adverse, are they relevant to humans??? JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 9
  • 10. Safety margin 28d 28d Rat Dog Rat Human In vitro Cell Animal Animal Rat No rodent Resp Cardio CNS Off- hERG Active Ph I activity Model Model Tox Tox safety Safety safety targets (Pred) 105 MLD 104 LOAEL NOAEL Concentration (nM)* 103 EC50 ID50 IC50 102 HEC Good Tol & IC50 pA2 Biomark Kd 101 JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX)
  • 11. Estimation of dose for FIH If they are adverse, are they relevant to humans??? Monitorable, Reversible (Rescue treatment) Jumping into human doses: FDA Guidance for Industry: Estimating the Maximum Safe Starting Dose in Initial Clinical Trials for Therapeutics in Adult Healthy Volunteers • Establish HED/MRSD based on NOAEL/MABEL • Apply safety margin • Define a escalation range JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 11
  • 12. However….are we doing well? Jonathan Hitchcock, 2003 Pfizer JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 12
  • 13. The Attrition Problem Pedro Cuatrecases, Drug discovery in jeopardy, 2006 • Productivity 1-2 drugs/10 reach market • Budgets increase x30 since 1970 ($5billion /year) • Revolutionary scientific advances in last 20 years, offering new and innovative opportunities JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 13
  • 14. The Attrition Problem Angela Dunne, GSK, 2011 The attrition rate for drug discovery programs from target to clinic is unacceptably high –Causes a lack of new medicines to treat diseases of high unmet need –Results in inefficiency of drug discovery organizations, requiring large target portfolios to ensure sufficient medicine output Significant contributors to attrition post-candidate are lack of efficacy and/or toxicity –Deployment of more physiological screens earlier in the drug discovery process should make a significant impact in the overall attrition rate JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 14
  • 15. The Attrition Problem Jim Kling, MSN Health & Fitness FDA agency failed to catch serious side effects in a number of drugs before they were approved, thus forcing embarrassing withdrawals Drug Company Indication Why Expiration date Vioxx Painkiller CV events 2004 Merck Bextra Painkiller CV events 2005 Pfizer Zelnorm IBS Heart problems 2007 Novartis Tysabri MS Progressive multifocal 2005 Biogen Idec leukoencephalopathy Neurospec Appendicities Life-threating side effects 2005 Palatin Thec. diagnosis Cylert ADHA Liver failure 2005 Abbot Permax Parkinson Blood backlow to aortic valves 2007 Valentant Baycol Cholesterol Fatal rhabdomyolysis 2001 Bayer Palladone Narcotic painkiller Sever effecst when taken with 2005 Purde Pharma alcohol JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 15
  • 16. The Attrition Problem: reasons (I) • Patient population is heterogeneous. Differ at genetic level with regard to drug transport, metabolism, expression of disease, etc • Early testing using tissues, cells, are just partially predictive. • Preclinical testing in animals models is modestly predictive of effects in humans • To many repeats, mainly in Discovery • Marketing • Management JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 16
  • 17. On track? Candidate Preclinical Clinical selection Development Development Challenges Opportunities Increasing predictability and regulatory acceptance Creating entirely new therapeutic approaches (gene therapy, of in silico / in vitro methods antibody therapy, stem cells). Adding more knowledge to the drug discovery process, so as to make success more certain : Pharmacogenomics–Drugs and dosage chosen based on genetic Genomics, proteomics, metabonomics composition –‘personalised medicine Molecular toxicology Transgenic animal models Biomarkers Help pharmaceutical companies Bioinformatics to get their programmes to fail The only way to reduce costs and reduce time efficiently to launch is by reducing repeats, at any stage. - Confidential - JORNADA TOX® 17 (Barcelona, 1 de febrer de 2013 - CERETOX)
  • 18. On track ! 1. Olson H, 2000 : survey from 12 pharmaceutical companies with data compiled from 150 compounds with 221 Human Toxicity (HT) events reported. Positive HT concordance rate of 71% for rodent and nonrodent species 2. 1991- 40% of attrition was due to poor PK/BA Implementation of sophisticated panels of early in vitro ADME 2000 – a reduction to 10% 3. Fresh from the biotech pipeline 2011 (Jim Klings): Drugs approvals were up in 2011, reversing the trend, thanks to biologics JORNADA TOX® - Confidential - (Barcelona, 1 de febrer de 2013 - CERETOX) 18