Chavan Finland 13082009
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Public Interest Lecture given at Helsinki on 13th August 2009.
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Chavan Finland 13082009
- 1. GLOBALBIODIVERSITY Helsinki, 13 August 2009 INFORMATIONFACILITY Discovery and Mobilisation of Primary Biodiversity Data: Challenges and Potentials Vishwas Chavan GBIF Secretariat WWW.GBIF.ORG Building the Biodiversity Informatics Commons
- 2. Primary Biodiversity Data: Definition Primary Biodiversity Data are the digital text or multimedia data records that detail the instance of an organism – the ‘what, where, when, how and by whom’ of the organism’s occurrence and recording
- 3. Conservation and sustainable use of biodiversity Policy development and decision making (at local, national, regional, and global levels) Biodiversity Data Monitoring of status and trends of biodiversity (sound science) Significance of Biodiversity Data
- 5. Analyse and predict spread of pests and diseases of humans, crops, livestock, wildlife, etc.
- 6. Predict best places to set up new protected areas
- 7. Analyse invasive species and predict invasion pathways
- 8. Provide policymaker-relevant data of all kinds
- 10. It is all about…… Data Data Data Data Data Data Content Data Data Data Data Data Content Content Content Content Data Data Content Data Data Data Content Data Content Content Data Content Content Data Data Content Content Data Data Data Data Content Data Data Content Data Content Data Data Data Data Data Content Data Data Data
- 12. Data exchange / sharing
- 14. Free and Open Access
- 16. Few more facts….. Investment in biodiversity information management is towards large projects Research in biodiversity informatics is focused towards large data publishers Small Data Publishers – A neglected mass!
- 18. Most of existing and future data would be hold by Small Data Publishers
- 19. 80% of current investment is towards Small Data Publishers
- 21. Big Awards: 1869
- 27. Not maintained for reuse by others
- 29. Uneven distribution as well unequal access
- 31. developing an advanced informatics infrastructure for the global scientific (+ national research institutions) community for accessing and sharing data and thereby making better use of the huge investments in data collection, storage, management and updating of biodiversity information in countries.
- 33. GBIF’s multilateral mandate Catalyse building a global informatics research infrastructure by: - promoting global participation, working through and linking up a global network of partners - Enabling publishing of biodiversity data - promoting development of data exchange standards - building an informatics architecture - capacity building - catalysing development of analytical tools data provider / aggregator
- 35. Searches
- 36. Taxonomic
- 37. Geographic, by
- 38. country,
- 39. region, or
- 40. bounding-box
- 41. By dataset
- 42. or a combination of these
- 43. Taxonomic browse navigation using choice of classification
- 45. Georef’d data via GBIF portal (>181m records mapped to a 1 X 1 degree grid)
- 46. In summary…GBIF’s Informatics Improved access to Names, Metadata and Primary Biodiversity Data Distributed GBIF informatics architecture Faster and easier publishing of data
- 47. At the core, a Discovery System DiscoverySystem ServicePublishers Others… Registering Discovering DataPublishers Consumers Searching Retrieving
- 48. That links to resources… Who? Institutions, Collections … What? Data, Services, GUID/LSID… Where? Location, Access points… When? Temporal Scope… How Formats, protocols, qualities …./ A distributed service ………….. which resolves to information resources
- 50. Key Components: the IPT Registration (GBRDS) + Publishing of Names, Metadata, Primary biodiversity data etc… IPT Data Publisher The Integrated Publishing Toolkit isa state-of-the-art tool to simplify the mobilization of biodiversity information resources such as Names, Metadata andprimary biodiversity data
- 51. Simple process! The Integrated Publishing Toolkit (IPT) is designed to simplify the mapping, indexing and harvesting of Names, Metadata and Primary Biodiversity Data!
- 52. Building a comprehensive global architecture for nomenclature
- 53. Examples of resources provided by GBIF all are free
- 54. Data mobilised by the USA, including other countries of origin
- 55. GBIF Data portal and data access/sharing/ repatriation
- 56. Users of GBIF data Scientists, experts Government officials at all levels Education at all levels NGOs and the general public These needs are highly varied, but can be met by open access to the same datasets The same data can be analysed differently for different uses
- 57. Integrating Biodiversity Data… World Database on Protected Areas Primary Biodiversity Data >60,000 protected areas >181 M specimenand observation data Species geo-referenced data. taxonomic resolution (intelligence) Spain Madagascar Visualisation on WDPA site Each Protected Area polygon processed…. Data processing from the two databases
- 64. Moving towards… global integration ? Migratory Spp. ThreatenedSpp.; Red List Spp. Invasives, crop wild relatives, medicinals, etc.
- 66. Invader - fastest spreading mosquito in the world
- 67. Aggressive daytime biter and pest
- 69. Aedes albopictus:potential USA invasion Projected Asian niche onto present USA to create invasion risk-map.
- 70. Aedesalbopictus: actual USA invasion (by county)
- 71. Aedes albopictus: world risk-map (present)
- 72. Using GBIF data in CC models Sterculiaceae (Meliaceae, Dipterocapaceae)
- 74. Some do gain habitat potential, but this requires migration and suitable habitat (for forests) at destination;
- 78. Addresses social, technical, and policy concerns
- 80. Data Publishing = Scholarly Publishing ?
- 81. Conservation and sustainable use of biodiversity Policy development and decision making (at local, national, regional, and global levels) Primary Biodiversity Data Monitoring of status and trends of biodiversity (sound science)
- 82. www.gbif.org Thank you! Vishwas Chavan: vchavan@gbif.org
- 83. How to contact GBIF: Web site:www.gbif.org Data portal:data.gbif.org GBIF Secretariat Universitetsparken 152100 CopenhagenDenmark E-mail:info@gbif.org Phone: +45 3532 1470 Fax: +45 3532 1480 GBIF Secretariat building, supported by a grant from the Aage V. Jensens Fonde
Notes de l'éditeur
- If one analyze the trends of investment in biodiversity informatics activities in the North, major funding has been attracted by large, projects rather than small scale data management. In fact, R&D activities in the area of biodiversity informatics themselves are focused to address the needs of large data publishers. Small data publishers who has ability to contribute much required droplets to oceans of biodiversity data are the neglected mass!
- Long ta80% of science funding is disbursed for small projects. NSF 2007 awards - 9347 ($2,137,636,716) BIG – 1869 ($1,199,088,125), SMALL – 7478 ($938,548,595). Computational and standards thinking needs to free the long tail or liberate the dark data.
- Add a NODES component to this SLIDE as GBIF historical focus has collections as a core