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Greedy enough for the Grid?



           Matteo Romanello
Centre for Computing in the Humanities
                 KCL
Overview
●   PhD in Digital Humanities: co-supervised between CCH
    and dCS at KCL
●   Information extraction from Classics-related materials
●   This talk: pragmatic approach to the use of the Grid from a
    newbie/user perspective
●   NGS UK: “aims to enable coherent electronic access for
    UK researchers to all computational and data based
    resources and facilities required to carry out their
    research, independent of resource or researcher location.”
Grid and scalability
●   Computational intensive processes are
    particular greedy in terms of resource use
●   (simple) processes dry a *normal* machine
●   Size of text corpora causes performance
    problems
Example 1
●   Code written in Java/Groovy
●   Comparing the OCR output with the groundtruth
●   String comparison for alignment (line by line)
●   Need to execute batch processes (doc by doc,
    page by page, line by line etc.)
●   1024mb of heap space to be released for Java to
    run the process on a small size sample (not to talk
    about an XSLT transformation on a 7mb XML file)
Example 2
●   Code in Java (author Federico Boschetti)
●   Alignment of multiple OCR streams
●   Generation of error patterns for each OCR
    engine
●   Output → a new OCR transcription resulting
    from the merging of the input OCR streams
●   Merging based on the probabilistic likelihood of
    a character to be correct provided the error
    pattern of each OCR stream
Get ready for the Grid
●   Does the prog language matter? (my code is
    already in Java...)
●   How I/O operations work on the Grid? How to
    rely on Grid storage?
●   Better having thread-based programs?
●   How to prepare my own code to be ran on a
    grid, i.e. gridifying my application
Thank you for your attention!

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Greedy enough for the Grid? Getting started with distributed computing

  • 1. Greedy enough for the Grid? Matteo Romanello Centre for Computing in the Humanities KCL
  • 2. Overview ● PhD in Digital Humanities: co-supervised between CCH and dCS at KCL ● Information extraction from Classics-related materials ● This talk: pragmatic approach to the use of the Grid from a newbie/user perspective ● NGS UK: “aims to enable coherent electronic access for UK researchers to all computational and data based resources and facilities required to carry out their research, independent of resource or researcher location.”
  • 3. Grid and scalability ● Computational intensive processes are particular greedy in terms of resource use ● (simple) processes dry a *normal* machine ● Size of text corpora causes performance problems
  • 4. Example 1 ● Code written in Java/Groovy ● Comparing the OCR output with the groundtruth ● String comparison for alignment (line by line) ● Need to execute batch processes (doc by doc, page by page, line by line etc.) ● 1024mb of heap space to be released for Java to run the process on a small size sample (not to talk about an XSLT transformation on a 7mb XML file)
  • 5. Example 2 ● Code in Java (author Federico Boschetti) ● Alignment of multiple OCR streams ● Generation of error patterns for each OCR engine ● Output → a new OCR transcription resulting from the merging of the input OCR streams ● Merging based on the probabilistic likelihood of a character to be correct provided the error pattern of each OCR stream
  • 6. Get ready for the Grid ● Does the prog language matter? (my code is already in Java...) ● How I/O operations work on the Grid? How to rely on Grid storage? ● Better having thread-based programs? ● How to prepare my own code to be ran on a grid, i.e. gridifying my application
  • 7. Thank you for your attention!