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Architectures	
  d’intégra1on	
  de	
  
diverses	
  sources	
  de	
  données	
  
Béatrice	
  BOUCHOU	
  MARKHOFF	
  
	
  
Laboratoire	
  d’Informa<que	
  
	
  
	
  
Université	
  François	
  Rabelais	
  de	
  Tours	
  
Ontologies	
  en	
  SHS	
  	
  9	
  novembre	
  2015,	
  MSH	
  VdL,	
  Tours
ž  The	
  objec<ve	
  is	
  Data	
  Integra<on	
  
BD	
  
BD	
  
BD	
  
Source1	
  
Source2	
  
Source3	
  
Uniform	
  access	
  to	
  
distributed	
  sources	
  
Common	
  
interface	
  
XML	
  
ž  Data	
  warehouse	
  
	
  
[Wikipedia,	
  nov-­‐2013]	
  	
  
ETL:	
  Extrac<ng-­‐Transforming-­‐Loading	
  
ž  Media<on	
  [Lenzerini	
  2002]	
  
	
  
[Wikipedia,	
  nov-­‐2013]	
  	
  
ž  Using	
  ontologies	
  for	
  data	
  integra<on	
  [Wache	
  et	
  al.	
  2001]	
  
S1 S2 Sn
Global* Ontology
Single'Ontology
[B.$Amann$et$al.$2002]
S1 S2 Sn
Local*
Ontology
Multiple(Ontologies
Local*
Ontology
Local*
Ontology
[Mena&et&al.&2000]
S1 S2 Sn
Local*
Ontology
Hybrid
Local*
Ontology
Local*
Ontology
[I.$F.$Cruz$et$al.$2009]
Shared vocabulary
ž  Seman<c	
  Web…	
  
As of September 2011
Music
Brainz
(zitgist)
P20
Turismo
de
Zaragoza
yovisto
Yahoo!
Geo
Planet
YAGO
World
Fact-
book
El
Viajero
Tourism
WordNet
(W3C)
WordNet
(VUA)
VIVO UF
VIVO
Indiana
VIVO
Cornell
VIAF
URI
Burner
Sussex
Reading
Lists
Plymouth
Reading
Lists
UniRef
UniProt
UMBEL
UK Post-
codes
legislation
data.gov.uk
Uberblic
UB
Mann-
heim
TWC LOGD
Twarql
transport
data.gov.
uk
Traffic
Scotland
theses.
fr
Thesau-
rus W
totl.net
Tele-
graphis
TCM
Gene
DIT
Taxon
Concept
Open
Library
(Talis)
tags2con
delicious
t4gm
info
Swedish
Open
Cultural
Heritage
Surge
Radio
Sudoc
STW
RAMEAU
SH
statistics
data.gov.
uk
St.
Andrews
Resource
Lists
ECS
South-
ampton
EPrints
SSW
Thesaur
us
Smart
Link
Slideshare
2RDF
semantic
web.org
Semantic
Tweet
Semantic
XBRL
SW
Dog
Food
Source Code
Ecosystem
Linked Data
US SEC
(rdfabout)
Sears
Scotland
Geo-
graphy
Scotland
Pupils &
Exams
Scholaro-
meter
WordNet
(RKB
Explorer)
Wiki
UN/
LOCODE
Ulm
ECS
(RKB
Explorer)
Roma
RISKS
RESEX
RAE2001
Pisa
OS
OAI
NSF
New-
castle
LAAS
KISTI
JISC
IRIT
IEEE
IBM
Eurécom
ERA
ePrints dotAC
DEPLOY
DBLP
(RKB
Explorer)
Crime
Reports
UK
Course-
ware
CORDIS
(RKB
Explorer)
CiteSeer
Budapest
ACM
riese
Revyu
research
data.gov.
ukRen.
Energy
Genera-
tors
reference
data.gov.
uk
Recht-
spraak.
nl
RDF
ohloh
Last.FM
(rdfize)
RDF
Book
Mashup
Rådata
nå!
PSH
Product
Types
Ontology
Product
DB
PBAC
Poké-
pédia
patents
data.go
v.uk
Ox
Points
Ord-
nance
Survey
Openly
Local
Open
Library
Open
Cyc
Open
Corpo-
rates
Open
Calais
OpenEI
Open
Election
Data
Project
Open
Data
Thesau-
rus
Ontos
News
Portal
OGOLOD
Janus
AMP
Ocean
Drilling
Codices
New
York
Times
NVD
ntnusc
NTU
Resource
Lists
Norwe-
gian
MeSH
NDL
subjects
ndlna
my
Experi-
ment
Italian
Museums
medu-
cator
MARC
Codes
List
Man-
chester
Reading
Lists
Lotico
Weather
Stations
London
Gazette
LOIUS
Linked
Open
Colors
lobid
Resources
lobid
Organi-
sations
LEM
Linked
MDB
LinkedL
CCN
Linked
GeoData
LinkedCT
Linked
User
Feedback
LOV
Linked
Open
Numbers
LODE
Eurostat
(Ontology
Central)
Linked
EDGAR
(Ontology
Central)
Linked
Crunch-
base
lingvoj
Lichfield
Spen-
ding
LIBRIS
Lexvo
LCSH
DBLP
(L3S)
Linked
Sensor Data
(Kno.e.sis)
Klapp-
stuhl-
club
Good-
win
Family
National
Radio-
activity
JP
Jamendo
(DBtune)
Italian
public
schools
ISTAT
Immi-
gration
iServe
IdRef
Sudoc
NSZL
Catalog
Hellenic
PD
Hellenic
FBD
Piedmont
Accomo-
dations
GovTrack
GovWILD
Google
Art
wrapper
gnoss
GESIS
GeoWord
Net
Geo
Species
Geo
Names
Geo
Linked
Data
GEMET
GTAA
STITCH
SIDER
Project
Guten-
berg
Medi
Care
Euro-
stat
(FUB)
EURES
Drug
Bank
Disea-
some
DBLP
(FU
Berlin)
Daily
Med
CORDIS
(FUB)
Freebase
flickr
wrappr
Fishes
of Texas
Finnish
Munici-
palities
ChEMBL
FanHubz
Event
Media
EUTC
Produc-
tions
Eurostat
Europeana
EUNIS
EU
Insti-
tutions
ESD
stan-
dards
EARTh
Enipedia
Popula-
tion (En-
AKTing)
NHS
(En-
AKTing) Mortality
(En-
AKTing)
Energy
(En-
AKTing)
Crime
(En-
AKTing)
CO2
Emission
(En-
AKTing)
EEA
SISVU
educatio
n.data.g
ov.uk
ECS
South-
ampton
ECCO-
TCP
GND
Didactal
ia
DDC Deutsche
Bio-
graphie
data
dcs
Music
Brainz
(DBTune)
Magna-
tune
John
Peel
(DBTune)
Classical
(DB
Tune)
Audio
Scrobbler
(DBTune)
Last.FM
artists
(DBTune)
DB
Tropes
Portu-
guese
DBpedia
dbpedia
lite
Greek
DBpedia
DBpedia
data-
open-
ac-uk
SMC
Journals
Pokedex
Airports
NASA
(Data
Incu-
bator)
Music
Brainz
(Data
Incubator)
Moseley
Folk
Metoffice
Weather
Forecasts
Discogs
(Data
Incubator)
Climbing
data.gov.uk
intervals
Data
Gov.ie
data
bnf.fr
Cornetto
reegle
Chronic-
ling
America
Chem2
Bio2RDF
Calames
business
data.gov.
uk
Bricklink
Brazilian
Poli-
ticians
BNB
UniSTS
UniPath
way
UniParc
Taxono
my
UniProt
(Bio2RDF)
SGD
Reactome
PubMed
Pub
Chem
PRO-
SITE
ProDom
Pfam
PDB
OMIM
MGI
KEGG
Reaction
KEGG
Pathway
KEGG
Glycan
KEGG
Enzyme
KEGG
Drug
KEGG
Com-
pound
InterPro
Homolo
Gene
HGNC
Gene
Ontology
GeneID
Affy-
metrix
bible
ontology
BibBase
FTS
BBC
Wildlife
Finder
BBC
Program
mes BBC
Music
Alpine
Ski
Austria
LOCAH
Amster-
dam
Museum
AGROV
OC
AEMET
US Census
(rdfabout)
Media
Geographic
Publications
Government
Cross-domain
Life sciences
User-generated content
ž  Sens,	
  schéma,	
  type	
  :	
  rdf:type	
  
doc.html	
  est	
  écrit	
  par	
  Fabien	
  	
  
doc.html	
  a	
  pour	
  sujet	
  Musique	
  
	
  
Fabien	
  est	
  un	
  homme	
  
doc.html	
  est	
  un	
  document	
  
Musique	
  est	
  une	
  valeur	
  de	
  sujet	
  
	
  
Fabien
est écrit par
doc.html
a pour sujet
Musique
Source	
  
data	
  
Triplestore	
   Ontology	
  
(Web)	
  
Applica<on	
  
Source	
  
data	
  
OBDA
mappings
[Calvanese	
  et	
  
al.	
  2007]	
  
Extract
Transform
Load
SPARQLSPARQL
(Web)	
  
Applica<on	
  
S
W
d
a
t
a
S
W
d
a
t
a
Applica<on	
  Mediator	
  
SW	
  
data	
  
SW	
  
data	
  
SW	
  
data	
  
SPARQL
SPARQL
Local
ontology
Source3
Local
ontology
Source2Source1
Global ontology
Mapping
S
O
U
R
C
E
S
REFERENCE
ONTOLOGY
Agreement Agreement
Local
data
Local
data
Local
data
Local
data
Local
ontology
Agreement
[Niang	
  et	
  al.	
  2011,	
  2013]	
  
align	
  
M
E
D
I
A
T
O
R
Local
ontology
Source3
Local
ontology
Local
ontology
Source2Source1
Global ontology
Mapping
M
E
D
I
A
T
O
R
S
O
U
R
C
E
S
Agreement
User Interface
or
SPARQL endpoint
Query
rewriting
Quey
dispatching
Answers
collection
Query
Global answer
Agreement Agreement
Local
data Local
data
Local
data
Local
data
Partial
answers
[Bouchou,	
  Niang	
  2014]	
  
Sparql	
  
Query	
  
Interfaces	
  
Cartography	
  
Social	
  
Networks	
  
Thesaurus	
  
Students	
  
Poi<ers	
  
Lesellier
Orléans	
  
Chantres	
  
Tours	
  
Bude	
  
Paris	
  
Ontop	
   Ontop	
  Ontop	
  Ontop	
  
Sparql	
   Sparql	
   Sparql	
  
Seman<c	
  Web
Web	
  
Site	
  
Web	
  
Site	
  
Sparql	
  
PERSONAE	
  MEDIATOR	
   Sparql	
  
hep://ontop.inf.unibz.it/	
  	
  
 
SOURCES	
  
annota<ons	
   images	
   databases	
  
CONCEPTS	
  
describing	
  SOURCES	
  
REFERENCE	
  
ONTOLOGIES	
  
SPARQL	
  queriable	
  
SOURCES	
  
THESAURUS	
  
MAPPING	
  	
  
FRAMEWORKS	
  
ž  Intégra<on	
  de	
  données	
  
›  Entrepôts,	
  Médiateurs	
  
›  Ontologies	
  
ž  Web	
  séman<que	
  
›  Export	
  (duplica<on)	
  /	
  Interface	
  d’accès	
  (OBDA)	
  
›  Dans	
  les	
  2	
  cas	
  :	
  ontologie	
  
›  Média<on	
  pour	
  interroger	
  
ž  3	
  niveaux	
  d’architecture	
  
›  Niveau	
  «	
  données	
  »	
  
ž  Ontologies	
  :	
  cadre	
  et	
  support	
  de	
  communica<on	
  
entre	
  SHS	
  et	
  «	
  informa<ciens	
  »	
  

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Oshs_9_11_2015

  • 1. Architectures  d’intégra1on  de   diverses  sources  de  données   Béatrice  BOUCHOU  MARKHOFF     Laboratoire  d’Informa<que       Université  François  Rabelais  de  Tours   Ontologies  en  SHS    9  novembre  2015,  MSH  VdL,  Tours
  • 2. ž  The  objec<ve  is  Data  Integra<on   BD   BD   BD   Source1   Source2   Source3   Uniform  access  to   distributed  sources   Common   interface   XML  
  • 3. ž  Data  warehouse     [Wikipedia,  nov-­‐2013]     ETL:  Extrac<ng-­‐Transforming-­‐Loading  
  • 4. ž  Media<on  [Lenzerini  2002]     [Wikipedia,  nov-­‐2013]    
  • 5. ž  Using  ontologies  for  data  integra<on  [Wache  et  al.  2001]   S1 S2 Sn Global* Ontology Single'Ontology [B.$Amann$et$al.$2002] S1 S2 Sn Local* Ontology Multiple(Ontologies Local* Ontology Local* Ontology [Mena&et&al.&2000] S1 S2 Sn Local* Ontology Hybrid Local* Ontology Local* Ontology [I.$F.$Cruz$et$al.$2009] Shared vocabulary ž  Seman<c  Web…  
  • 6. As of September 2011 Music Brainz (zitgist) P20 Turismo de Zaragoza yovisto Yahoo! Geo Planet YAGO World Fact- book El Viajero Tourism WordNet (W3C) WordNet (VUA) VIVO UF VIVO Indiana VIVO Cornell VIAF URI Burner Sussex Reading Lists Plymouth Reading Lists UniRef UniProt UMBEL UK Post- codes legislation data.gov.uk Uberblic UB Mann- heim TWC LOGD Twarql transport data.gov. uk Traffic Scotland theses. fr Thesau- rus W totl.net Tele- graphis TCM Gene DIT Taxon Concept Open Library (Talis) tags2con delicious t4gm info Swedish Open Cultural Heritage Surge Radio Sudoc STW RAMEAU SH statistics data.gov. uk St. Andrews Resource Lists ECS South- ampton EPrints SSW Thesaur us Smart Link Slideshare 2RDF semantic web.org Semantic Tweet Semantic XBRL SW Dog Food Source Code Ecosystem Linked Data US SEC (rdfabout) Sears Scotland Geo- graphy Scotland Pupils & Exams Scholaro- meter WordNet (RKB Explorer) Wiki UN/ LOCODE Ulm ECS (RKB Explorer) Roma RISKS RESEX RAE2001 Pisa OS OAI NSF New- castle LAAS KISTI JISC IRIT IEEE IBM Eurécom ERA ePrints dotAC DEPLOY DBLP (RKB Explorer) Crime Reports UK Course- ware CORDIS (RKB Explorer) CiteSeer Budapest ACM riese Revyu research data.gov. ukRen. Energy Genera- tors reference data.gov. uk Recht- spraak. nl RDF ohloh Last.FM (rdfize) RDF Book Mashup Rådata nå! PSH Product Types Ontology Product DB PBAC Poké- pédia patents data.go v.uk Ox Points Ord- nance Survey Openly Local Open Library Open Cyc Open Corpo- rates Open Calais OpenEI Open Election Data Project Open Data Thesau- rus Ontos News Portal OGOLOD Janus AMP Ocean Drilling Codices New York Times NVD ntnusc NTU Resource Lists Norwe- gian MeSH NDL subjects ndlna my Experi- ment Italian Museums medu- cator MARC Codes List Man- chester Reading Lists Lotico Weather Stations London Gazette LOIUS Linked Open Colors lobid Resources lobid Organi- sations LEM Linked MDB LinkedL CCN Linked GeoData LinkedCT Linked User Feedback LOV Linked Open Numbers LODE Eurostat (Ontology Central) Linked EDGAR (Ontology Central) Linked Crunch- base lingvoj Lichfield Spen- ding LIBRIS Lexvo LCSH DBLP (L3S) Linked Sensor Data (Kno.e.sis) Klapp- stuhl- club Good- win Family National Radio- activity JP Jamendo (DBtune) Italian public schools ISTAT Immi- gration iServe IdRef Sudoc NSZL Catalog Hellenic PD Hellenic FBD Piedmont Accomo- dations GovTrack GovWILD Google Art wrapper gnoss GESIS GeoWord Net Geo Species Geo Names Geo Linked Data GEMET GTAA STITCH SIDER Project Guten- berg Medi Care Euro- stat (FUB) EURES Drug Bank Disea- some DBLP (FU Berlin) Daily Med CORDIS (FUB) Freebase flickr wrappr Fishes of Texas Finnish Munici- palities ChEMBL FanHubz Event Media EUTC Produc- tions Eurostat Europeana EUNIS EU Insti- tutions ESD stan- dards EARTh Enipedia Popula- tion (En- AKTing) NHS (En- AKTing) Mortality (En- AKTing) Energy (En- AKTing) Crime (En- AKTing) CO2 Emission (En- AKTing) EEA SISVU educatio n.data.g ov.uk ECS South- ampton ECCO- TCP GND Didactal ia DDC Deutsche Bio- graphie data dcs Music Brainz (DBTune) Magna- tune John Peel (DBTune) Classical (DB Tune) Audio Scrobbler (DBTune) Last.FM artists (DBTune) DB Tropes Portu- guese DBpedia dbpedia lite Greek DBpedia DBpedia data- open- ac-uk SMC Journals Pokedex Airports NASA (Data Incu- bator) Music Brainz (Data Incubator) Moseley Folk Metoffice Weather Forecasts Discogs (Data Incubator) Climbing data.gov.uk intervals Data Gov.ie data bnf.fr Cornetto reegle Chronic- ling America Chem2 Bio2RDF Calames business data.gov. uk Bricklink Brazilian Poli- ticians BNB UniSTS UniPath way UniParc Taxono my UniProt (Bio2RDF) SGD Reactome PubMed Pub Chem PRO- SITE ProDom Pfam PDB OMIM MGI KEGG Reaction KEGG Pathway KEGG Glycan KEGG Enzyme KEGG Drug KEGG Com- pound InterPro Homolo Gene HGNC Gene Ontology GeneID Affy- metrix bible ontology BibBase FTS BBC Wildlife Finder BBC Program mes BBC Music Alpine Ski Austria LOCAH Amster- dam Museum AGROV OC AEMET US Census (rdfabout) Media Geographic Publications Government Cross-domain Life sciences User-generated content
  • 7. ž  Sens,  schéma,  type  :  rdf:type   doc.html  est  écrit  par  Fabien     doc.html  a  pour  sujet  Musique     Fabien  est  un  homme   doc.html  est  un  document   Musique  est  une  valeur  de  sujet     Fabien est écrit par doc.html a pour sujet Musique
  • 8. Source   data   Triplestore   Ontology   (Web)   Applica<on   Source   data   OBDA mappings [Calvanese  et   al.  2007]   Extract Transform Load SPARQLSPARQL (Web)   Applica<on   S W d a t a S W d a t a
  • 9. Applica<on  Mediator   SW   data   SW   data   SW   data   SPARQL SPARQL
  • 11. Local ontology Source3 Local ontology Local ontology Source2Source1 Global ontology Mapping M E D I A T O R S O U R C E S Agreement User Interface or SPARQL endpoint Query rewriting Quey dispatching Answers collection Query Global answer Agreement Agreement Local data Local data Local data Local data Partial answers [Bouchou,  Niang  2014]  
  • 12. Sparql   Query   Interfaces   Cartography   Social   Networks   Thesaurus   Students   Poi<ers   Lesellier Orléans   Chantres   Tours   Bude   Paris   Ontop   Ontop  Ontop  Ontop   Sparql   Sparql   Sparql   Seman<c  Web Web   Site   Web   Site   Sparql   PERSONAE  MEDIATOR   Sparql   hep://ontop.inf.unibz.it/    
  • 13.
  • 14.   SOURCES   annota<ons   images   databases   CONCEPTS   describing  SOURCES   REFERENCE   ONTOLOGIES   SPARQL  queriable   SOURCES   THESAURUS   MAPPING     FRAMEWORKS  
  • 15. ž  Intégra<on  de  données   ›  Entrepôts,  Médiateurs   ›  Ontologies   ž  Web  séman<que   ›  Export  (duplica<on)  /  Interface  d’accès  (OBDA)   ›  Dans  les  2  cas  :  ontologie   ›  Média<on  pour  interroger   ž  3  niveaux  d’architecture   ›  Niveau  «  données  »   ž  Ontologies  :  cadre  et  support  de  communica<on   entre  SHS  et  «  informa<ciens  »