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GraphTech Ecosystem - part 3: Graph Visualization

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The graph ecosystem presentation lists and introduces the graph visualization actors: graph visualization libraries and toolkits; graph visualizers and add-ons

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GraphTech Ecosystem - part 3: Graph Visualization

  1. 1. The GraphTech Ecosystem 2019
  2. 2. The three layers of graph technology Graph visualization tools Graph computing framework Graph databases Visualize Analyze Store Backend Frontend
  3. 3. The graph visualization ecosystem Graph visualization libraries & toolkits Graph visualization software and web applications Built-in visualizers & add-ons Link to full access at the end of the presentation
  4. 4. Graph visualization libraries and toolkits
  5. 5. AfterGlow AfterGlow http://afterglow.sourceforge.net/main.ht ml About AfterGlow is a tool which facilitates the process of generating graphs. AfterGlow is a script that assists with the visualization of log data. It reads CSV files and converts them into a Graph description. The latest version AfterGlow 1.6.5 was released on 07/08/13.
  6. 6. Alchemy.js Alchemy.js http://graphalchemist.github.io/Alchemy /#/ About Alchemy.js is a graph drawing application built almost entirely in d3. Alchemy.js was built so that developers could easily get up and running with graph visualization applications, without much over head. Minimal code is actually required to generate Alchemy.js graphs with most projects. Most customization of the application takes place by overriding default configurations, rather than direct implementation via JavaScript.
  7. 7. Arbor.JS Arbor.JS http://arborjs.org/ About Arbor.js is a graph visualization library using web workers and jQuery. Rather than trying to be an all-encompassing framework, arbor provides an efficient, force-directed layout algorithm plus abstractions for graph organization and screen refresh handling. It leaves the actual screen-drawing to you. This means you can use it with canvas, SVG, or even positioned HTML elements; whatever display approach is appropriate for your project and your performance needs.
  8. 8. ccNetViz ccNetViz https://anadroid.github.io/ccNetViz/ About ccNetViz is a lightweight, high performance javascript library for large network graphs visualization using WebGL. It is an open source library available under GPLv3 License developed in the Helikar Lab.
  9. 9. Circos Circos http://www.circos.ca/ About Circos is a software package for visualizing data and information. It visualizes data in a circular layout — this makes Circos ideal for exploring relationships between objects or positions. There are other reasons why a circular layout is advantageous, not the least being the fact that it is attractive.
  10. 10. Cola.JS Cola.JS http://marvl.infotech.monash.edu/webco la/ About cola.js (A.K.A. "WebCoLa") is an open-source JavaScript library for arranging your HTML5 documents and diagrams using constraint-based optimization techniques. It works well with libraries like D3.js, svg.js, and Cytoscape.js. The core layout is based on a complete rewrite in Javascript of the C++ libcola library.
  11. 11. Cytoscape.js Cytoscape.js http://cytoscape.github.io/cytoscape.js/i ndex.html About Cytoscape.js is a fully featured graph library written in pure JS with a permissive open source license (MIT) for the core Cytoscape.js library and all first-party extensions. It is used in commercial projects and open-source projects in production and designed for users first, for both frontfacing app use-cases and developer use-cases. It includes graph theory algorithms, from BFS to PageRank
  12. 12. D3.JS D3.JS http://d3js.org/ About D3.js is a JavaScript library for manipulating documents based on data. D3 helps you bring data to life using HTML, SVG, and CSS. D3’s emphasis on web standards gives you the full capabilities of modern browsers without tying yourself to a proprietary framework, combining powerful visualization components and a data-driven approach to DOM manipulation.
  13. 13. Dagre-d3 Dagre-d3 https://github.com/cpettitt/dagre-d3 About Dagre is a JavaScript library that makes it easy to lay out directed graphs on the client-side. The dagre-d3 library acts as a front-end to dagre, providing actual rendering using D3.
  14. 14. Dash Cytoscape Dash Cytoscape https://github.com/plotly/dash-cytoscap e About Dash Cytoscape is a Component Library for Dash aimed at facilitating network visualization in Python, wrapped around Cytoscape.js.
  15. 15. Dracula Graph library Dracula Graph library https://www.graphdracula.net/ About Dracula.js is a set of tools to display and layout interactive connected graphs and networks, along with various related algorithms from the field of graph theory. Just plain JavaScript and SVG. The code is released under the MIT license, so commercial use is totally fine.
  16. 16. Flare Flare http://flare.prefuse.org/ About Flare is an ActionScript library for creating visualizations that run in the Adobe Flash Player. From basic charts and graphs to complex interactive graphics, the toolkit supports data management, visual encoding, animation, and interaction techniques. Even better, flare features a modular design that lets developers create customized visualization techniques without having to reinvent the wheel.
  17. 17. G6 G6 https://github.com/antvis/g6 About G6 is a graph visualization framework which provides a set of basic mechanisms. Developers are able to build graph visualization analysis application or graph visualization modeling application easily.
  18. 18. GDToolkit GDToolkit http://www.dia.uniroma3.it/~gdt/gdt4/in dex.php About GDToolkit (also known as GDT) is a Graph Drawing Toolkit designed to efficiently manipulate several types of graph, and to automatically draw them according to many different aesthetic criteria and constraints.
  19. 19. GGraph GGraph https://github.com/pcbje/ggraph About GGraph is a graph visualization library for big messy data. This is a library built on top D3 with the goal of improving how we work with large and messy graphs. It extends the notion of nodes and links with groups of nodes. This is useful when multiple nodes are in fact the same thing or belong to the same group.
  20. 20. GoJS GoJS https://gojs.net/latest/index.html About GoJS is a JavaScript and TypeScript library for building interactive diagrams and graphs. GoJS allows you to build all kinds of diagrams and graphs for your users, from simple flowcharts and org charts to highly-specific industrial diagrams, SCADA and BPMN diagrams, medical diagrams like genograms, and more. GoJS makes constructing JavaScript diagrams of complex nodes, links, and groups easy with customizable templates and layouts.
  21. 21. Grano Grano http://granoproject.org/ About Grano is an open source tool for journalists and researchers who want to track networks of political or economic interest. It helps understand the most relevant relationships in your investigations, and to merge data from different sources.
  22. 22. GraphGL GraphGL https://github.com/uskudnik/GraphGL About GraphGL is a network visualization library designed for rendering (massive) graphs in web browsers and puts dynamic graph exploration on the web another step forward. In short - it either calculates the layout of the graph in real time or reads node positions. It is therefore suitable for static files (exported GraphML/GEXF files converted to JSON) and for dynamic files.
  23. 23. Graphosaurus Graphosaurus https://github.com/frewsxcv/graphosaur us About Graphosaurus is a three-dimensional static graph viewer powered by WebGL (three.js).
  24. 24. Graph Stream Graph Stream http://graphstream-project.org/ About GraphStream is a Java library for the modeling and analysis of dynamic graphs. You can generate, import, export, measure, layout and visualize them.
  25. 25. Graph Tool Graph Tool https://graph-tool.skewed.de/ About Graph-tool is a Python module for manipulation and statistical analysis of graphs. Contrary to most other python modules with similar functionality, the core data structures and algorithms are implemented in C++, making extensive use of template metaprogramming, based heavily on the Boost Graph Library. This confers it a level of performance that is comparable (both in memory usage and computation time) to that of a pure C/C++ library.
  26. 26. Graphviz Graphviz http://www.graphviz.org/ About The Graphviz package consists of a variety of software for drawing attributed graphs. It implements a handful of common graph layout algorithms.The Graphviz layout programs take descriptions of graphs in a simple text language, and make diagrams in useful formats, such as images and SVG for web pages; PDF or Postscript for inclusion in other documents; or display in an interactive graph browser.
  27. 27. Graphvy Graphvy https://github.com/anbarief/Graphvy About Basic graph (data) exploration and visualization using Kivy.
  28. 28. H3Viewer H3Viewer https://graphics.stanford.edu/~munzner /h3/ About The H3Viewer library provides layout and interactive navigation of node-link graphs in 3D hyperbolic space. The library can handle quite large graphs of over to 300,000 edges quickly and with minimal visual clutter. The hyperbolic view allows the user to see a great deal of the context around the current focus node.
  29. 29. igraph igraph http://igraph.org/ About igraph is a collection of network analysis tools with the emphasis on efficiency, portability and ease of use. igraph is open source and free. igraph can be programmed in R, Python, Mathematica and C/C++.
  30. 30. ipysigma ipysigma https://pypi.org/project/ipysigma/ About Ipysigma is a custom Jupyter widget library to display graphs using sigma.js
  31. 31. JavaScript Diagram JavaScript Diagram https://www.syncfusion.com/javascript- ui-controls/diagram About The JavaScript Diagram is a feature-rich library for visualizing, creating, and editing interactive diagrams. It supports creating flowcharts, organizational charts, mind maps, and BPMN charts either through code or a visual interface.
  32. 32. Java Universal Network/Graph Framework Java Universal Network/Graph Framework http://jung.sourceforge.net/ About JUNG — the Java Universal Network/Graph Framework--is a software library that provides a common and extendible language for the modeling, analysis, and visualization of data that can be represented as a graph or network. It is written in Java, which allows JUNG-based applications to make use of the extensive built-in capabilities of the Java API, as well as those of other existing third-party Java libraries.
  33. 33. JavaScript InfoVis Toolkit JavaScript InfoVis Toolkit http://philogb.github.io/jit/ About The JavaScript InfoVis Toolkit provides tools for creating Interactive Data Visualizations for the Web.
  34. 34. Joint JS Joint JS https://www.jointjs.com/opensource About JointJS is a JavaScript diagramming library with many native features to support visualization and interaction with diagrams and graphs.
  35. 35. JS Graph it JS Graph it http://js-graph-it.sourceforge.net/ About JS Graph is a JavaScript library for graphs representation that allows you to connect your HTML elements using css classes to declare blocks, connectors, labels... no Javascript code required.
  36. 36. jsPlumb jsPlumb https://github.com/jsplumb/jsplumb/ About jsPlumb provides a means for a developer to visually connect elements on their web pages. It uses SVG and runs on all browsers from IE9 and later.
  37. 37. Keylines Keylines http://keylines.com/ About KeyLines is a JavaScript software development kit (SDK) for building applications to visualize and analyze complex connected data. Keylines' SDK enables developers to customize every phase and every function of application they develop, such as visual features, the user interface, user interaction and more. The platform is completely web-based, running on all major browsers, across devices, as a standalone tool with its own systems and dashboards.
  38. 38. LargeViz LargeViz https://github.com/lferry007/LargeVis About LargeVis is the official implementation of the LargeVis model by the original authors, which is used to visualize large-scale and high-dimensional data (Tang, Liu, Zhang and Mei). It now supports visualizing both high-dimensional feature vectors and networks. The package also contains a very efficient algorithm for constructing K-nearest neighbor graph (K-NNG).
  39. 39. multiNetX multiNetX https://github.com/nkoub/multinetx About multiNetX is a python package for the manipulation and visualization of multilayer networks. The core of this package is a MultilayerGraph, a class that inherits all properties from networkx.Graph().
  40. 40. mxGraph mxGraph http://www.jgraph.com/mxgraph.html About mxGraph is a fully client side JavaScript diagramming library that uses SVG and HTML for rendering. draw.io is an example that extends the functionality of this library. The sources to draw.io are also available.
  41. 41. Neovis Js Neovis Js https://github.com/neo4j-contrib/neovis. js/ About Neo4j + vis.js = neovis.js. Graph visualizations in the browser with data from Neo4j. You can connect to Neo4j instance to get live data, specify labels and property to be displayed, specify Cypher query to populate.
  42. 42. NetJSON NetJSON https://github.com/netjson/netjsongraph .js About Leverage the power of d3.js to visualize network topology using the NetJSON NetworkGraph format. Build powerful and interoperable visualizations without losing flexibility!
  43. 43. NodeBox NodeBox https://www.nodebox.net/code/index.ph p/Graph About The NodeBox Graph library includes algorithms from NetworkX for betweenness centrality and eigenvector centrality, Connelly Barnes' implementation of Dijksta shortest paths and the spring layout for JavaScript by Aslak Hellesoy and Dave Hoover. The goal of this library is visualization of small graphs (<200 elements), if you need something more robust we recommend using NetworkX.
  44. 44. OGDF OGDF http://www.ogdf.net/doku.php About OGDF - the Open Graph Drawing Framework - is a self-contained C++ class library for the automatic layout of diagrams. OGDF offers sophisticated algorithms and data structures to use within your own applications or scientific projects. The library is available under the GNU General Public License.
  45. 45. Ogma Ogma http://ogma.linkurio.us/ About Ogma is a JavaScript library for large-scale graph visualization and interaction, developed by Linkurious. It embeds a powerful graphics engine that ensures high-performance rendering when working with large graph, even on low-end computers. Ogma brings you several state-of-the-art layouts and all features required to display, explore, and interact with graph data. Ogma's APIs are designed be consistent and easy to use, making it the perfect tool to quickly develop a robust and feature-rich application.
  46. 46. Popoto.js Popoto.js http://www.popotojs.com/ About Popoto.js is a JavaScript library built with D3.js designed to create interactive and customizable visual query builder for Neo4j graph databases. The graph queries are translated into Cypher and run on the database. Popoto also helps to display and customize the results.
  47. 47. Processing.JS Processing.JS http://processingjs.org/ About Processing.js is the sister project of the popular Processing visual programming language, designed for the web. Processing.js makes your data visualizations, digital art, interactive animations, educational graphs, video games, etc. work using web standards and without any plug-ins. You write code using the Processing language, include it in your web page, and Processing.js does the rest.
  48. 48. Protovis Protovis http://mbostock.github.io/protovis/ About Protovis composes custom views of data with simple marks such as bars and dots. Unlike low-level graphics libraries that quickly become tedious for visualization, Protovis defines marks through dynamic properties that encode data, allowing inheritance, scales and layouts to simplify construction. Protovis is no longer under active development.
  49. 49. Py3Plex Py3Plex https://github.com/SkBlaz/Py3plex About Heterogeneous networks are complex networks with additional information assigned to nodes or edges (or both). This library includes some of the state-of-the-art algorithms for decomposition, visualization and analysis of such networks.
  50. 50. PyGraphistry PyGraphistry https://github.com/graphistry/pygraphist ry About PyGraphistry is a visual graph analytics library to extract, transform, and load big graphs into Graphistry's cloud-based graph explorer. It supports unusually large graphs for interactive visualization. The client's custom WebGL rendering engine renders up to 8MM nodes and edges at a time, and most older client GPUs smoothly support somewhere between 100K and 1MM elements.
  51. 51. Quickgraph Quickgraph https://archive.codeplex.com/?p=quickgr aph About QuickGraph provides generic directed/undirected graph datastructures and algorithms for .NET. QuickGraph comes with algorithms such as depth first seach, breath first search, A* search, shortest path, k-shortest path, maximum flow, minimum spanning tree, least common ancestors, etc... QuickGraph supports MSAGL, GLEE, and Graphviz to render the graphs, serialization to GraphML, etc...
  52. 52. Rapidd Rapidd http://resources.jointjs.com/demos About Rappid is a diagramming framework for advanced applications, delivering the best of HTML 5 + SVG and providing you with the right tools to build outstanding products. Rappid is the commercial extension to the JointJS Core library. It builds on the JointJS foundation and greatly extends it's functionality with widgets, interaction components, additional shapes, and other functionality to build advanced HTML 5 applications.
  53. 53. Sigma.JS Sigma.JS http://sigmajs.org/ About Sigma is a JavaScript library dedicated to graph drawing. It makes easy to publish networks on Web pages, and allows developers to integrate network exploration in rich Web applications.
  54. 54. Soba Soba https://github.com/mil-tokyo/soba About A visualization toolkit coordinating with Sushi and Tempura. Soba is a 2D plotting library integrated with Sushi (https://github.com/mil-tokyo/sushi) written in javascript. This library is easy to use, can work in web browsers and coordinate with Sushi and Tempura(https://github.com/mil-tokyo/tempura).
  55. 55. SoNIA SoNIA http://web.stanford.edu/group/sonia/ About SoNIA is a Java-based package for visualizing dynamic or longitudinal "network" data. By dynamic, we mean that in addition to information about the relations (ties) between various entities (actors, nodes) there is also information about when these relations occur, or at least the relative order in which they occur.
  56. 56. Statnet Statnet https://github.com/statnet/statnet About Statnet - Software Tools for the Statistical Analysis of Network Data (meta-package) - is an integrated set of tools for the representation, visualization, analysis, and simulation of network data.
  57. 57. Tom Sawyer Perspectives Tom Sawyer Perspectives https://www.tomsawyer.com/home/inde x.php About Tom Sawyer Perspectives is a robust platform for building enterprise-class graph and data visualization and analysis applications. It is a complete graph visualization software development kit (SDK) with a graphics-based design and preview environment. The platform integrates enterprise data sources with our powerful graph visualization, layout, and analysis technology to solve big data problems.
  58. 58. Tulip Tulip http://tulip.labri.fr/TulipDrupal/ About Tulip is an information visualization framework dedicated to the analysis and visualization of relational data. Tulip aims to provide the developer with a complete library, supporting the design of interactive information visualization applications for relational data that can be tailored to the problems he or she is addressing. Written in C++ the framework enables the development of algorithms, visual encodings, interaction techniques, data models, and domain-specific visualizations.
  59. 59. Tulip uGraph https://github.com/lizhongit/ugraph About uGraph is an MIT-license open source project, and it's a feature-rich JavaScript & SVG library for implementing custom interactive diagrams. Use very easy and has rich API, JSON format do as data type of import/export, High performance render of Big-data
  60. 60. Vis.JS Vis.JS http://visjs.org/ About Vis.js is a dynamic, browser based visualization library. The library is designed to be easy to use, to handle large amounts of dynamic data, and to enable manipulation of and interaction with the data. The library consists of the components DataSet, Timeline, Network, Graph2d and Graph3d.
  61. 61. visNetwork visNetwork https://github.com/datastorm-open/visN etwork About VisNetwork is an R package, using vis.js library for network visualization. visNetwork is now available on CRAN.
  62. 62. VivaGraphJS VivaGraphJS https://github.com/anvaka/VivaGraphJS About VivaGraphJS is a graph drawing library for JavaScript. It is designed to be extensible and to support different rendering engines and layout algorithms. Underlying algorithms have been broken out into ngraph.
  63. 63. yFiles yFiles http://www.yworks.com/en/index.html About The yFiles diagramming software components are extensive class libraries that enable you to add high-quality diagramming functionality to your own software applications.
  64. 64. Built-in visualizers and other add-ons
  65. 65. AgensBrowser AgensBrowser https://bitnine.net/blog-agens-solution/blog-agensbro wser/announcing-agensbrowser-web-v-1-0-release/ About AgensBrowser web v1.0 is a tool that visualizes the data from AgensGraph, the Graph Database solution, more intuitively than the others to help you clearly understand your data. AgensBrowser web v1.0 offers a user interface that you can access the data in AgensGraph via web browser, and it supports you to easily manage and visualize your data.
  66. 66. Bloom Bloom https://neo4j.com/bloom/ About Neo4j Bloom is a breakthrough graph exploration application available in the Neo4j Graph Platform. Bloom allows graph novices and experts alike the ability to investigate and explore their graph data visually from different business perspectives.
  67. 67. Google Fusion Tables Network Graph Google Fusion Tables Network Graph https://support.google.com/fusiontables /answer/2566732?hl=en About Fusion Tables is an experimental data visualization web application to gather, visualize, and share data tables. The Network Graph visualization supports undirected and directed graph structures. This type of visualization illuminates relationships between entities. Google Fusion Tables will not be available after Dec. 3, 2019
  68. 68. Graphexp Graphexp https://github.com/bricaud/graphexp About Graphexp is a lightweight web interface to explore and display a graph stored in a Gremlin graph database, via the Gremlin server (version 3.2.x or 3.3.x). Graphexp is under the Apache 2.0 license.
  69. 69. GraphStudio™ GraphStudio™ https://doc.tigergraph.com/TigerGraph- GraphStudio-UI-Guide.html About The TigerGraph GraphStudio™ UI (User Interface) provides an intuitive, browser-based interface that helps users get started quickly with graph-based application development tasks: designing a graph schema, creating a schema mapping, loading data, exploring the graph, and writing GSQL queries.
  70. 70. iGraph/M iGraph/M https://github.com/szhorvat/IGraphM About IGraph/M is a Mathematica package for use in complex networks and graph theory research. It started out as a well-integrated Mathematica interface to igraph, one of the most popular open source network analysis packages available. In addition to exposing igraph functionality to Mathematica, the current version of IGraph/M contains many other functions for working with graphs.
  71. 71. IPySigma IPySigma https://github.com/bsnacks000/IPySigm a-Demo About IPySigma is a lightweight python package coupled with a node-express/socket.io app. It is designed to support a seamless workflow for graph visualization in jupyter notebook by using the jupyterlab/services javscript library to leverage communication between networkx objects and sigma.js.
  72. 72. Neo4j Browser Neo4j Browser https://neo4j.com/developer/guide-neo4 j-browser/ About Neo4j Browser is the general purpose user interface for working with Neo4j. Query, visualize, administrate and monitor the database with modern and easy-to-use tools.
  73. 73. NetworkViz.jl NetworkViz.jl https://github.com/abhijithanilkumar/NetworkViz.jl/blo b/master/LICENSE.md About NetworkViz.jl is a Julia module to render graphs in 3D using ThreeJS tightly coupled with LightGraphs.
  74. 74. NodeXL NodeXL http://processingjs.org/ About NodeXL Basic is a free, open-source template for Microsoft® Excel® 2007, 2010, 2013 and 2016 that makes it easy to explore network graphs. With NodeXL, you can enter a network edge list in a worksheet, click a button and see your graph, all in the familiar environment of the Excel window.
  75. 75. SAP HANA Graph Viewer SAP HANA Graph Viewer https://developers.sap.com/tutorials/hana-grap h-overview-viewer.html About SAP HANA Graph Viewer is an additional tool for SAP HANA Graph. Besides visualizing vertices and edges of a graph workspace, HANA Graph Viewer enables developers to create SQL queries easily protecting them from the complexity of Graph language or GraphScript.
  76. 76. SNA Helper SNA Helper http://blog.schochastics.net/post/an-rst udio-addin-for-network-analysis-and-visu alization/ About SNAHelper is an Rstudio addon which provides a tiny GUI for visualizing and analysing networks.s
  77. 77. yFiles Neo4j Explorer yFiles Neo4j Explorer https://www.yworks.com/neo4j-explorer / About The yFiles Neo4j Explorer is a powerful and free online tool to visually explore your Neo4j databases. With the new Node Template Designer, you can easily style the database nodes in an easy-to-use WYSIWYG editor.
  78. 78. Graph visualization software and web applications Graph visualization software and web applications 2019 Free access