Web Servicing the Biological Office
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Presentation held at ECCB 05, Barcelona, about ProThesaurus and ProTag, a Web Service based Thesaurus for protein names and identifiers and a Microsoft Office Smart Tag and Addin solution
![Web Servicing the Biological Office ProTag, ProThesaurus and LiMB Martin Szugat ( [email_address] ) Bioinformatics group of the Ludwig-Maximilians-Universität München LFE Practical Computer Science and Bioinformatics With contributions from Daniel Güttler, Florian Sohler, Katrin Fundel, Ralf Zimmer Part of the HOBIT project Funded by Helmholtz-Gemeinschaft http://hobit.sourceforge.net/](https://image.slidesharecdn.com/web-servicing-the-biological-office-24707/85/Web-Servicing-the-Biological-Office-1-320.jpg)
![Motivation ,[object Object],[object Object],Protein name Information Database identifier](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
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Web Servicing the Biological Office
- 1. Web Servicing the Biological Office ProTag, ProThesaurus and LiMB Martin Szugat ( [email_address] ) Bioinformatics group of the Ludwig-Maximilians-Universität München LFE Practical Computer Science and Bioinformatics With contributions from Daniel Güttler, Florian Sohler, Katrin Fundel, Ralf Zimmer Part of the HOBIT project Funded by Helmholtz-Gemeinschaft http://hobit.sourceforge.net/
- 4. Concept Markup Database identifier Free text
- 5. Concept Database identifier Annotation Other identifiers Synonyms Web pages Web Services …
- 7. Implementation Download: http://services.bio.ifi.lmu.de/prothesaurus/
- 10. Application: Excel formulas and VBA Macros
- 11. Extension: Write your own Actions or Services Add Web Service methods as custom Actions
- 12. Extension: Write your own Actions or Services Integrate additional databases
- 13. Extension: Write your own Actions or Services User commited protein names and identifiers
- 14. Thanks for your attention! Open Questions? Coming soon: ProTag becomes open source: http://sourceforge.net/projects/protag
Editor's Notes
- Hello and welcome to my presentation about Web Servicing the Biological Office. My name is Martin Szugat. I‘m working for the Bioinformatics group of the Ludwig-Maximilians-University, Munich. Together with my colleagues we‘ve implemented an Office Add-In called ProTag and two Web Services called ProThesaurus and LiMB. The ProThesaurus web service is part of the HOBIT project which is funded by the Helmholtz society.