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Merck KGaA
Darmstadt, Germany
Process
Development for
Cell Therapy and
Viral Gene Therapy
Elie Hanania
Head of Process Development
The life science business of
Merck KGaA, Darmstadt, Germany
operates as MilliporeSigma
in the U.S. and Canada.
2
Viral Vectors are vehicles used to deliver a genetic payload into a target cell
Key Feature Include:
Viral Vectors in Cell & Gene Therapy
Safety
lacks viral genes
involved in
replication
Value
targeted delivery
for optimal
efficacy
Manufacturing
capable of
production and
purification to high
levels
Applicability
infect/transduce
a wide spectrum
of cells
Environmental
Containment
controlled virus
dissemination
3
Generalized Viral Vector Manufacturing Process
Thaw and Expand Cells
Seed Expansion Vessel
Vector Production –Infection/
Transfection
Filter Clarification
Concentration and
Final Formulation
Sterile Filtration
Fill and Finish
• Volume
• Media
• Virus Size & Properties
• Purification Mode
• Nature of
Contaminants
• Pressure / Shear
• Final Filtration
• Aggregation
2nd Chromatography
Step
• Volume
• Surface Area
• Pore Size
• Flow Rate
• Pressure /Shear
• Virus Stability
Factors to
consider
Factors to
consider
Downstream
Midstream
• Cell type
• Final titer
• Adherent/
suspension
• Pressure /Shear
• Virus Stability
Factors to
consider
Upstream
Lysis / Benzonase®
Concentration and
Diafiltration
1st Chromatography
Step
4
Industrialization ongoing, but multiple solutions exist on market
TFF UF/DF
Pellicon® 2
Cassette
Biomax® 100 kD
Membrane
DNA Digestion
Benzonase®
Endonuclease
ELISA Kit II
Mobius ® Mixer
1° Chromatography
Fractogel® TMAE
Resin
Media & Inoculum Prep
Millipore Express®
HPF > SHR Filters
Cell Growth &
Virus Production
Mobius® Bioreactor
Novaseptum®
Sampling
Aervent® (vent filter)
Virus Harvest
(Cell Lysis)
Mobius ®
Mixer
1° Clarification
Polygard ® CR Filter
Clarisolve® Filter
Millistak ® Filter
TFF UF/DF
Pellicon® 2
Cassette
Biomax® 300
kD Membrane
Sterile Filtration
Durapor ®
0.22mm
Membrane
2° Clarification
Clarigard ® Filter
Milligard ® Filter
Polysep® II Filter
Durapore® Membrane
2°
Chromatography
Fractogel® DMAE
Resin
F&F
Mobius®
Integrated
Fill Finish
Solutions
Thaw and
Expand
Cells and
Seeds
5
 Raw Materials and Reagents
 Equipment
 Consumable Sets
 Single Use Technology
Path to Commercialization – Critical Factors
Viral Vectors Manufacturing
 Product Quality
 Product Yield
 Titer
 Purity
 Equipment
 Unit Operations
 Mode of Operation
 Stability
 Tolerance
 Feasible Range
 Process Time
1
cGMP
Compatible
4
Robust
2
Scalable
3
Reproducible
6
Master Cell Line Production (MCB); 800 vials
Limited time factoring in release testing
No Process Development work done
Requirements exceeded typical 200 vials
Cell expansion performed in adherent cultures
in ten-layered CellSTACKS
All components, reagents, supplies procured
Batch records approved
Scenario 1: Lack of Process Development 1
cGMP
Compatible
4
Robust
2
Scalable
3
Reproducible
Solution
• Go back to Process Development
• Optimize cell processing; focus on
duration
• Assess cryopreservation conditions
• Confirm recovery & viability post
thaw
• PD work added 10% to total cost
• Time Impact: None
Outcome
• Low recovery and viability upon thaw
• Financial impact: Additional 35% of
total cost
• Time Impact: Additional 24% of total
duration
7
“Rushed” Production and Purification
Tech transfer to Process Development (PD)
Process required development and verification at
scale
Limited Process Development performed
Client rushed into cGMP production. Changes were
made during the run - NOT tested in PD
Changes included: Cell line, production
parameters, size of purifications platforms
Scenario 2: Lack of Process Development
Solution
• Extended PD with scale up
verification studies
• New cell line tested in PD
• Production parameters re-
assessed and locked for Tech
Transfer
• Based on scale run, filters, TFF
cartridges & Chromatography
columns were scaled appropriately
• Engineering run was successful
• Additional PD work added 10% to
the total cost
• Time Impact: Additional 15% of
duration to deal with project creep
Outcome
• Low titer and yield; material not
enough for client needs
• Financial impact: Additional 53% of
total cost
• Time Impact: Additional 31% of total
duration. Extended time to close
events and initiate CAPAs
1
cGMP
Compatible
4
Robust
2
Scalable
3
Reproducible
8
Step-wise Planning for Production and
Purification
Client started with tech transfer to PD
Process performed for verification
Process was modified for cGMP
production. Progressive scale up studies
done
Client transferred analytical assays and
requested development of others
Assays qualified in preparation for cGMP
runs
Batch records were generated based on
tech transfer from PD to GMP
Engineering run performed. Production
summary review
Scenario 3: Process Development Completed
Outcome
• Time and budget for thorough tech
transfer and development activities
• Tasks fulfilled as planned
• High yield; material exceeded client
needs
• Financial impact: None. Scope well
defined and priced accordingly
• Time Impact: None. Project timeline
discussed with client. Updates provided
during the PD
1
cGMP
Compatible
4
Robust
2
Scalable
3
Reproducible
9
Process optimization critical to maximizing yield
Lentivirus production processes remain challenging
67-100%
Step yields up…
~55%
Benzonase®
Endonuclease/
Clarification
TFF1 TFF2 Sterile
Filtration
Chromatography
45-50% ~85% 30-85%
Up to 10-20%
10
Process development levers exist to maximize yield
AAV production processes achieving higher process yields
83-100%
Step yields up…
60-100%
Benzonase®
Endonuclease/
Clarification
TFF1 TFF2 Sterile
Filtration
Chromatography
50-90% ~85% 70-93%
Up to 20-40%
11
Levers for optimizing unit operations
Step Primary Focus Optimization Impact
Tangential flow:
Concentration
Shear Flow rate
Control pressure
Functional titer
Tangential flow:
Diafiltration
Virus Stability Buffer composition
Number of dia-volumes
Yield and functional titer
Chromatography:
Ion Exchange
Recovery and Purity Adjust conductivity
Adjust pH
Load, wash, elution
rates
Titer, yield, residuals,
impurities
Functional titer
Chromatography:
Affinity
Recovery and Purity Adjust pH
Elution Buffer
composition
Titer, yield, impurities
Chromatography:
Size Exclusion
Purity Operation rate
Choice of resin
Yield, impurities
Filtration Step Recovery
Virus Stability
Pressure and rate
Membrane type and
size.
Titer, yield, aggregation,
Functional titer
12
Early engagement accelerates best practice sharing
PD and CMO manufacture critical on path to commercialization
Client Key Activities 
Stage Review
|
Stage Review
|
Stage Review
|
Stage Review
|
3 months
3 months
for first batch
3 months
Tech Transfer: 3 months
Optimization: 6-12 months
13
Characterization is critical to ensure safety, consistency and robustness
Missed Opportunity: Characterization
Early (PD) Late (Eng / GMP)
Characterization studies reduce risk and
delays when done in parallel in PD
• Mass Balance
• Process
appropriateness
• Material/supplies
appropriateness
• Scale assessment
ProductProcess
• Safety
• Reproducibility
• Trending
• Contaminants
• Residuals
• Potency
• Stability
• Identity
• Appearance
• Titer
• Infectious titer
• Purity
14
Value of templated process
1 2 3 4 5 6 7 8 9 101112 1 2 3 4 5 6 7 8 9 101112 1 2 3 4 5 6 7 8 9 101112
Clinical
Activity
Release to clinic
Limited Extensive
GMP1
Confirmation
BOM/BR
Testing
Gap/Risk Analysis
Engineering
Tech Transfer
Process Development
GMP1
Eng. Run
Clinical
MCB
Release to clinic
Limited
WCB
Confirmation
Testing
PD
Cell Bank
Templated processes speed path clinical material and improve quality through standardization
Largest benefit when leveraging production cells through downstream processing, avoiding:
 Cell banking activities
 Tech transfer / most of process development
 Engineering run
 Custom Bill of Material / Batch Record creation
TemplateCustom
Potential savings: 14-18 months15
• Industrialization of viral vector manufacturing is needed
and in progress
• For successful commercialization, four factors must be
considered during process development:
1. cGMP Compatible
2. Scalability
3. Reproducibility
4. Robustness
• Templated processes speed path clinical material and
improve quality through standardization
Summary Slide
16
elie.hanania@milliporesigma.com
Elie Hanania
The vibrant M, Aervent, Benzonase, Biomax, Clarigard, Clairisolve, Durapore, Fractogel, Milligard, Millipore Express, Millistak, Mobius, Novaseptum, Pellicon, Polygard and Polysep
are trademarks of Merck KGaA, Darmstadt, Germany or its affiliates. All other trademarks are the property of their respective owners. Detailed information on trademarks is
available via publicly accessible resources.
© 2019 Merck KGaA, Darmstadt, Germany and/or its affiliates. All Rights Reserved.

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Process Development for Cell Therapy and Viral Gene Therapy

  • 1. Merck KGaA Darmstadt, Germany Process Development for Cell Therapy and Viral Gene Therapy Elie Hanania Head of Process Development
  • 2. The life science business of Merck KGaA, Darmstadt, Germany operates as MilliporeSigma in the U.S. and Canada. 2
  • 3. Viral Vectors are vehicles used to deliver a genetic payload into a target cell Key Feature Include: Viral Vectors in Cell & Gene Therapy Safety lacks viral genes involved in replication Value targeted delivery for optimal efficacy Manufacturing capable of production and purification to high levels Applicability infect/transduce a wide spectrum of cells Environmental Containment controlled virus dissemination 3
  • 4. Generalized Viral Vector Manufacturing Process Thaw and Expand Cells Seed Expansion Vessel Vector Production –Infection/ Transfection Filter Clarification Concentration and Final Formulation Sterile Filtration Fill and Finish • Volume • Media • Virus Size & Properties • Purification Mode • Nature of Contaminants • Pressure / Shear • Final Filtration • Aggregation 2nd Chromatography Step • Volume • Surface Area • Pore Size • Flow Rate • Pressure /Shear • Virus Stability Factors to consider Factors to consider Downstream Midstream • Cell type • Final titer • Adherent/ suspension • Pressure /Shear • Virus Stability Factors to consider Upstream Lysis / Benzonase® Concentration and Diafiltration 1st Chromatography Step 4
  • 5. Industrialization ongoing, but multiple solutions exist on market TFF UF/DF Pellicon® 2 Cassette Biomax® 100 kD Membrane DNA Digestion Benzonase® Endonuclease ELISA Kit II Mobius ® Mixer 1° Chromatography Fractogel® TMAE Resin Media & Inoculum Prep Millipore Express® HPF > SHR Filters Cell Growth & Virus Production Mobius® Bioreactor Novaseptum® Sampling Aervent® (vent filter) Virus Harvest (Cell Lysis) Mobius ® Mixer 1° Clarification Polygard ® CR Filter Clarisolve® Filter Millistak ® Filter TFF UF/DF Pellicon® 2 Cassette Biomax® 300 kD Membrane Sterile Filtration Durapor ® 0.22mm Membrane 2° Clarification Clarigard ® Filter Milligard ® Filter Polysep® II Filter Durapore® Membrane 2° Chromatography Fractogel® DMAE Resin F&F Mobius® Integrated Fill Finish Solutions Thaw and Expand Cells and Seeds 5
  • 6.  Raw Materials and Reagents  Equipment  Consumable Sets  Single Use Technology Path to Commercialization – Critical Factors Viral Vectors Manufacturing  Product Quality  Product Yield  Titer  Purity  Equipment  Unit Operations  Mode of Operation  Stability  Tolerance  Feasible Range  Process Time 1 cGMP Compatible 4 Robust 2 Scalable 3 Reproducible 6
  • 7. Master Cell Line Production (MCB); 800 vials Limited time factoring in release testing No Process Development work done Requirements exceeded typical 200 vials Cell expansion performed in adherent cultures in ten-layered CellSTACKS All components, reagents, supplies procured Batch records approved Scenario 1: Lack of Process Development 1 cGMP Compatible 4 Robust 2 Scalable 3 Reproducible Solution • Go back to Process Development • Optimize cell processing; focus on duration • Assess cryopreservation conditions • Confirm recovery & viability post thaw • PD work added 10% to total cost • Time Impact: None Outcome • Low recovery and viability upon thaw • Financial impact: Additional 35% of total cost • Time Impact: Additional 24% of total duration 7
  • 8. “Rushed” Production and Purification Tech transfer to Process Development (PD) Process required development and verification at scale Limited Process Development performed Client rushed into cGMP production. Changes were made during the run - NOT tested in PD Changes included: Cell line, production parameters, size of purifications platforms Scenario 2: Lack of Process Development Solution • Extended PD with scale up verification studies • New cell line tested in PD • Production parameters re- assessed and locked for Tech Transfer • Based on scale run, filters, TFF cartridges & Chromatography columns were scaled appropriately • Engineering run was successful • Additional PD work added 10% to the total cost • Time Impact: Additional 15% of duration to deal with project creep Outcome • Low titer and yield; material not enough for client needs • Financial impact: Additional 53% of total cost • Time Impact: Additional 31% of total duration. Extended time to close events and initiate CAPAs 1 cGMP Compatible 4 Robust 2 Scalable 3 Reproducible 8
  • 9. Step-wise Planning for Production and Purification Client started with tech transfer to PD Process performed for verification Process was modified for cGMP production. Progressive scale up studies done Client transferred analytical assays and requested development of others Assays qualified in preparation for cGMP runs Batch records were generated based on tech transfer from PD to GMP Engineering run performed. Production summary review Scenario 3: Process Development Completed Outcome • Time and budget for thorough tech transfer and development activities • Tasks fulfilled as planned • High yield; material exceeded client needs • Financial impact: None. Scope well defined and priced accordingly • Time Impact: None. Project timeline discussed with client. Updates provided during the PD 1 cGMP Compatible 4 Robust 2 Scalable 3 Reproducible 9
  • 10. Process optimization critical to maximizing yield Lentivirus production processes remain challenging 67-100% Step yields up… ~55% Benzonase® Endonuclease/ Clarification TFF1 TFF2 Sterile Filtration Chromatography 45-50% ~85% 30-85% Up to 10-20% 10
  • 11. Process development levers exist to maximize yield AAV production processes achieving higher process yields 83-100% Step yields up… 60-100% Benzonase® Endonuclease/ Clarification TFF1 TFF2 Sterile Filtration Chromatography 50-90% ~85% 70-93% Up to 20-40% 11
  • 12. Levers for optimizing unit operations Step Primary Focus Optimization Impact Tangential flow: Concentration Shear Flow rate Control pressure Functional titer Tangential flow: Diafiltration Virus Stability Buffer composition Number of dia-volumes Yield and functional titer Chromatography: Ion Exchange Recovery and Purity Adjust conductivity Adjust pH Load, wash, elution rates Titer, yield, residuals, impurities Functional titer Chromatography: Affinity Recovery and Purity Adjust pH Elution Buffer composition Titer, yield, impurities Chromatography: Size Exclusion Purity Operation rate Choice of resin Yield, impurities Filtration Step Recovery Virus Stability Pressure and rate Membrane type and size. Titer, yield, aggregation, Functional titer 12
  • 13. Early engagement accelerates best practice sharing PD and CMO manufacture critical on path to commercialization Client Key Activities  Stage Review | Stage Review | Stage Review | Stage Review | 3 months 3 months for first batch 3 months Tech Transfer: 3 months Optimization: 6-12 months 13
  • 14. Characterization is critical to ensure safety, consistency and robustness Missed Opportunity: Characterization Early (PD) Late (Eng / GMP) Characterization studies reduce risk and delays when done in parallel in PD • Mass Balance • Process appropriateness • Material/supplies appropriateness • Scale assessment ProductProcess • Safety • Reproducibility • Trending • Contaminants • Residuals • Potency • Stability • Identity • Appearance • Titer • Infectious titer • Purity 14
  • 15. Value of templated process 1 2 3 4 5 6 7 8 9 101112 1 2 3 4 5 6 7 8 9 101112 1 2 3 4 5 6 7 8 9 101112 Clinical Activity Release to clinic Limited Extensive GMP1 Confirmation BOM/BR Testing Gap/Risk Analysis Engineering Tech Transfer Process Development GMP1 Eng. Run Clinical MCB Release to clinic Limited WCB Confirmation Testing PD Cell Bank Templated processes speed path clinical material and improve quality through standardization Largest benefit when leveraging production cells through downstream processing, avoiding:  Cell banking activities  Tech transfer / most of process development  Engineering run  Custom Bill of Material / Batch Record creation TemplateCustom Potential savings: 14-18 months15
  • 16. • Industrialization of viral vector manufacturing is needed and in progress • For successful commercialization, four factors must be considered during process development: 1. cGMP Compatible 2. Scalability 3. Reproducibility 4. Robustness • Templated processes speed path clinical material and improve quality through standardization Summary Slide 16
  • 17. elie.hanania@milliporesigma.com Elie Hanania The vibrant M, Aervent, Benzonase, Biomax, Clarigard, Clairisolve, Durapore, Fractogel, Milligard, Millipore Express, Millistak, Mobius, Novaseptum, Pellicon, Polygard and Polysep are trademarks of Merck KGaA, Darmstadt, Germany or its affiliates. All other trademarks are the property of their respective owners. Detailed information on trademarks is available via publicly accessible resources. © 2019 Merck KGaA, Darmstadt, Germany and/or its affiliates. All Rights Reserved.

Notes de l'éditeur

  1. Stage gate reviews will include the team as well as the client. These serve as an interim “health check” to assess the status and risk of the project. Additionally, each stage exit includes a management review. Client’s Product Development cycle is included to help align our nomenclature and definitions.