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Open Drug Discovery Teams
Dr. Alex M. Clark
Dr. Sean Ekins
© 2012-2013 Molecular Materials Informatics, Inc.
and Collaborations in Chemistry
April 2013
Hacking Health Montréal
http://molmatinf.com/oddt.html
Background
Motivation
• Early 2012: Sean Ekins met Jill Wood at a rare disease
conference
• Mother of a child suffering from Sanfillipo Syndrome
- Incident rate: 1 in 100,000
• Had to become a scientist, doctor, entrepreneur and venture
capitalist to accelerate a cure




• Finding information shouldn't be so hard...
Jonah's Just Begun
Phoenix Nest Biotech
phoenixnestbiotech.com
The Problem
• Rare diseases? Neglected markets?
• Resources are extremely tight
• Cannot afford not to share research
#
$ • Drug discovery research is very asymmetric
• Diseases with many wealthy sufferers get
most of the attention: great return on
investment
>7000 rare diseases
The Solution
• government
• pharma
• charity
funding • academics
• startups
• foundations
• literature
• open science
• blogs
publication
Twitter
• content
aggregation
• research
communities
Open Drug Discovery Teams
#hashtags
RSS Feeds
The App: Open Drug Discovery Teams
#sanfilipposyndrome #tuberculosis #leishmaniasis
#huntingtons#hivaids
#chagas#malaria
#greenchemistry
#H5N1
• iPhone, iPod, iPad
• Free!

http://oddt.net
Topic Browsing
• Users curate the relevant content by endorsing
• Interaction is done by tweeting from the app
• The result is a crowd-curated knowledge resource
• Magazine-like
• Thumbnails
• Links
• Molecules
• Voting
Molecules
• ODDT is chemistry aware...









• ... harvesting chemical data allows many possibilities
Where to next
• ODDT is an experimental project
• Sponsorship:

• App is free, data is totally open
• Potentially valuable intellectual property
• Know of a rare or neglected disease with an online
community?
➡ We can add a new topic
• Know anyone who is interested in sponsoring projects
to increase awareness of rare or neglected diseases?
➡ Contact us!
!10
More Information
Dr. Alex M. Clark
@aclarkxyz

Dr. Sean Ekins
@collabchem
© 2012-2013 Molecular Materials Informatics, Inc.
and Collaborations in Chemistry
http://oddt.net
http://molmatinf.com/oddt.html
http://cheminf20.org
http://collabchem.com

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Open Drug Discovery Teams @ Hacking Health Montreal

  • 1. !1 Open Drug Discovery Teams Dr. Alex M. Clark Dr. Sean Ekins © 2012-2013 Molecular Materials Informatics, Inc. and Collaborations in Chemistry April 2013 Hacking Health Montréal http://molmatinf.com/oddt.html
  • 3. Motivation • Early 2012: Sean Ekins met Jill Wood at a rare disease conference • Mother of a child suffering from Sanfillipo Syndrome - Incident rate: 1 in 100,000 • Had to become a scientist, doctor, entrepreneur and venture capitalist to accelerate a cure • Finding information shouldn't be so hard... Jonah's Just Begun Phoenix Nest Biotech phoenixnestbiotech.com
  • 4. The Problem • Rare diseases? Neglected markets? • Resources are extremely tight • Cannot afford not to share research # $ • Drug discovery research is very asymmetric • Diseases with many wealthy sufferers get most of the attention: great return on investment >7000 rare diseases
  • 5. The Solution • government • pharma • charity funding • academics • startups • foundations • literature • open science • blogs publication Twitter • content aggregation • research communities Open Drug Discovery Teams #hashtags RSS Feeds
  • 6. The App: Open Drug Discovery Teams #sanfilipposyndrome #tuberculosis #leishmaniasis #huntingtons#hivaids #chagas#malaria #greenchemistry #H5N1 • iPhone, iPod, iPad • Free! http://oddt.net
  • 7. Topic Browsing • Users curate the relevant content by endorsing • Interaction is done by tweeting from the app • The result is a crowd-curated knowledge resource • Magazine-like • Thumbnails • Links • Molecules • Voting
  • 8. Molecules • ODDT is chemistry aware... • ... harvesting chemical data allows many possibilities
  • 9. Where to next • ODDT is an experimental project • Sponsorship: • App is free, data is totally open • Potentially valuable intellectual property • Know of a rare or neglected disease with an online community? ➡ We can add a new topic • Know anyone who is interested in sponsoring projects to increase awareness of rare or neglected diseases? ➡ Contact us!
  • 10. !10 More Information Dr. Alex M. Clark @aclarkxyz Dr. Sean Ekins @collabchem © 2012-2013 Molecular Materials Informatics, Inc. and Collaborations in Chemistry http://oddt.net http://molmatinf.com/oddt.html http://cheminf20.org http://collabchem.com