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G09-Misc-EMBOSS

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Bioinformatics Open Source Conference
Bioinformatics Open Source Conference

EMBOSS: New developments and extended data access (Peter Rice)

Technology
1 of 16
EMBOSS European Molecular Biology Open Software Suite Open-Bio Project Update 2011 Peter Rice pmr@ebi.ac.uk Alan Bleasby, Jon Ison, Mahmut Uludag, Michael Schuster
A quick introduction ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
Who do we serve? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
EMBOSS command line interface ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
EMBOSS Update ,[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
Data sources for EMBOSS ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
New data types: input and output ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
New query language ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
EDAM ontology ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
DRCAT Data Resource Catalogue ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
Ontologies: NCBI Taxonomy ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
Installation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
EMBOSS Interfaces and wrappers ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
EMBOSS Future Plans ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11
The Emboss Team BOSC 2011: EMBOSS 17.07.11 Peter Rice Alan Bleasby Jon Ison Mahmut Uludag Michael Schuster
Acknowledgements ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],BOSC 2011: EMBOSS 17.07.11

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G09-Misc-EMBOSS

  • 1. EMBOSS European Molecular Biology Open Software Suite Open-Bio Project Update 2011 Peter Rice pmr@ebi.ac.uk Alan Bleasby, Jon Ison, Mahmut Uludag, Michael Schuster
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  • 15. The Emboss Team BOSC 2011: EMBOSS 17.07.11 Peter Rice Alan Bleasby Jon Ison Mahmut Uludag Michael Schuster
  • 16.