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From	
  Flickr	
  by	
  OZinOH	
  

The	
  Data	
  Management	
  
Planning	
  Tool	
  

DMPTool	
  	
  

	
  

Carly	
  Strasser	
  	
  	
  |	
  @carlystrasser	
  
California	
  Digital	
  Library	
  
	
  

Cal	
  Poly	
  
Oct	
  2013	
  
Roadmap	
  
Background	
  
Current	
  DMP	
  tools	
  
A	
  walkthrough	
  of	
  
DMPTool	
  

From	
  Flickr	
  by	
  	
  (Luciano)	
  

DMPTool2	
  
From	
  Flickr	
  by	
  US	
  Army	
  Environmental	
  Command	
  

From	
  Flickr	
  by	
  	
  deltaMike	
  

From	
  Flickr	
  by	
  	
  DW0825	
  

C.	
  Strasser	
  

From	
  Flickr	
  by	
  Flickmor	
  

Courtesey	
  of	
  WHOI	
  
Data	
  management	
  
Documentation	
  
Reproducibility	
  

From	
  Flickr	
  by	
  ~Minnea~	
  
From	
  Flickr	
  by	
  	
  ahockey	
  

DMP
s!	
  
What	
  is	
  a	
  data	
  
management	
  plan?	
  
A	
  document	
  that	
  describes	
  
what	
  you	
  will	
  do	
  with	
  your	
  
data	
  both	
  
during	
  your	
  research	
  	
  
and	
  after	
  you	
  complete	
  
your	
  project	
  

From	
  Flickr	
  by	
  Barbies	
  Land	
  
From	
  Flickr	
  by	
  401(K)	
  2013	
  

For	
  funders:	
  
A	
  short	
  plan	
  submitted	
  
alongside	
  grant	
  applications	
  
	
  An	
  outline	
  of	
  	
  
– 
– 
– 
– 
– 
– 

what	
  will	
  be	
  collected	
  
methods	
  
But	
  they	
  
Standards	
   all	
  have	
  
different	
  requirements	
  
Metadata	
  
and	
  express	
  them	
  in	
  
sharing/access	
  
different	
  ways	
  
long-­‐term	
  storage	
  

	
  Includes	
  how	
  and	
  why	
  
Why	
  prepare	
  a	
  DMP?	
  
From	
  Flickr	
  by	
  natalinha	
  	
  

•  Saves	
  time	
  
•  Increases	
  research	
  
efficiency	
  
•  Satisfies	
  requirements	
  
When	
  do	
  you	
  plan?	
  

Yes.	
  
When	
  do	
  you	
  plan?	
  
Plan	
  

Proposal	
  
writing	
  

Research	
  

Ideas	
  

Collect	
  

Analyze	
  

Assure	
  

Integrate	
  

Discover	
  

Publication	
  

Describe	
  
Preserve	
  
Remember!	
  
From	
  Flickr	
  by	
  gmacfadyen	
  

•  Keep	
  your	
  plan	
  current	
  
•  Incorporate	
  changes	
  	
  
•  Use	
  as	
  a	
  guide	
  for	
  daily	
  
activities	
  
	
  
Where	
  to	
  start?	
  
From	
  Flickr	
  by	
  celikins	
  
Small	
  &	
  Simple	
  
•  Document	
  what	
  you	
  know	
  now	
  
•  Share	
  the	
  plan	
  with	
  your	
  team	
  
•  Avoid	
  procrastination	
  and	
  immobilization	
  
	
  

Where	
  to	
  start?	
  
Courtesy	
  of	
  Martin	
  Donnelly	
  

Research	
  Support	
  
Office	
  

Data	
  Library	
  /	
  Repository	
  

Researcher	
  

DMP?	
  

Unruly	
  
Data	
  

Computing	
  
Support	
  

Faculty	
  Ethics	
  
Committee	
  

Etc...	
  
Who:	
  Support	
  Services	
  &	
  
Collaborators	
  
Plan	
  section	
  

Support	
  

Information	
  about	
  data	
  

PI,	
  co-­‐PIs,	
  research	
  staff	
  

Metadata	
  content	
  &	
  format	
  

Librarians,	
  data	
  repositories	
  

Policies	
  for	
  access,	
  sharing,	
  
reuse	
  

Funder,	
  institute,	
  HIPPA,	
  IRB,	
  
users	
  

Long-­‐term	
  storage	
  and	
  data	
  
management	
  

Librarians,	
  IT	
  staff,	
  data	
  
repositories	
  

Budget	
  

Sponsored	
  programs	
  office,	
  
funder	
  
DMPs:	
  A	
  Short	
  History	
  
Liz	
  Lyon:	
  Dealing	
  
with	
  Data	
  	
  
2008	
  

UK	
  funder	
  expectations	
  
2009	
  
2009-­‐10	
  
DMPs:	
  A	
  Short	
  History	
  
Across	
  the	
  Pond…	
  
Federal	
  Funding	
  Accountability	
  
and	
  Transparency	
  Act	
  

2006	
  	
  

2010	
  –
present	
  	
  

2010	
  
NSF	
  DMP	
  Requirements	
  
From	
  Grant	
  Proposal	
  Guidelines:	
  
	
  DMP	
  supplement	
  may	
  include:	
  
1.  the	
  types	
  of	
  data,	
  samples,	
  physical	
  collections,	
  software,	
  curriculum	
  
materials,	
  and	
  other	
  materials	
  to	
  be	
  produced	
  in	
  the	
  course	
  of	
  the	
  project	
  
2.  	
  the	
  standards	
  to	
  be	
  used	
  for	
  data	
  and	
  metadata	
  format	
  and	
  content	
  
(where	
  existing	
  standards	
  are	
  absent	
  or	
  deemed	
  inadequate,	
  this	
  should	
  be	
  
documented	
  along	
  with	
  any	
  proposed	
  solutions	
  or	
  remedies)	
  
3.  	
  policies	
  for	
  access	
  and	
  sharing	
  including	
  provisions	
  for	
  appropriate	
  
protection	
  of	
  privacy,	
  confidentiality,	
  security,	
  intellectual	
  property,	
  or	
  other	
  
rights	
  or	
  requirements	
  
4.  	
  policies	
  and	
  provisions	
  for	
  re-­‐use,	
  re-­‐distribution,	
  and	
  the	
  production	
  of	
  
derivatives	
  
5.  	
  plans	
  for	
  archiving	
  data,	
  samples,	
  and	
  other	
  research	
  products,	
  and	
  for	
  
preservation	
  of	
  access	
  to	
  them	
  
1.  Types	
  of	
  data	
  &	
  other	
  information	
  
•  Types	
  of	
  data	
  produced	
  
•  Relationship	
  to	
  existing	
  data	
  
•  How/when/where	
  will	
  the	
  data	
  be	
  captured	
  or	
  
created?	
  

C.	
  Strasser	
  

•  How	
  will	
  the	
  data	
  be	
  processed?	
  
•  Quality	
  assurance	
  &	
  quality	
  control	
  measures	
  
•  Security:	
  version	
  control,	
  backing	
  up	
  

biology.kenyon.edu	
  

•  Who	
  will	
  be	
  responsible	
  for	
  data	
  management	
  
during/after	
  project?	
  
From	
  Flickr	
  by	
  Lazurite	
  
2.  Data	
  &	
  metadata	
  standards	
  
•  What	
  metadata	
  are	
  needed	
  to	
  make	
  the	
  data	
  meaningful?	
  
•  How	
  will	
  you	
  create	
  or	
  capture	
  these	
  metadata?	
  	
  

Wired.com	
  

•  Why	
  have	
  you	
  chosen	
  particular	
  standards	
  and	
  approaches	
  
for	
  metadata?	
  
3.  Policies	
  for	
  access	
  &	
  sharing	
  
4.  Policies	
  for	
  re-­‐use	
  &	
  re-­‐distribution	
  
•  Are	
  you	
  under	
  any	
  obligation	
  to	
  share	
  data?	
  	
  
•  How,	
  when,	
  &	
  where	
  will	
  you	
  make	
  the	
  data	
  available?	
  	
  
•  What	
  is	
  the	
  process	
  for	
  gaining	
  access	
  to	
  the	
  data?	
  	
  
•  Who	
  owns	
  the	
  copyright	
  and/or	
  intellectual	
  property?	
  
• 
• 
• 
• 
• 
• 

Will	
  you	
  retain	
  rights	
  before	
  opening	
  data	
  to	
  wider	
  use?	
  How	
  long?	
  
Are	
  permission	
  restrictions	
  necessary?	
  
Embargo	
  periods	
  for	
  political/commercial/patent	
  reasons?	
  	
  
Ethical	
  and	
  privacy	
  issues?	
  
Who	
  are	
  the	
  foreseeable	
  data	
  users?	
  
How	
  should	
  your	
  data	
  be	
  cited?	
  
5.  Plans	
  for	
  archiving	
  &	
  preservation	
  
•  What	
  data	
  will	
  be	
  preserved	
  for	
  the	
  long	
  term?	
  For	
  how	
  long?	
  	
  	
  
•  Where	
  will	
  data	
  be	
  preserved?	
  
•  What	
  data	
  transformations	
  need	
  to	
  occur	
  before	
  
preservation?	
  
•  What	
  metadata	
  will	
  be	
  submitted	
  
alongside	
  the	
  datasets?	
  
•  Who	
  will	
  be	
  responsible	
  for	
  preparing	
  
data	
  for	
  preservation?	
  Who	
  will	
  be	
  the	
  
main	
  contact	
  person	
  for	
  the	
  archived	
  
data?	
  
From	
  Flickr	
  by	
  theManWhoSurfedTooMuch	
  
Don’t	
  forget:	
  Budget	
  
•  Costs	
  of	
  data	
  preparation	
  &	
  documentation	
  
Hardware,	
  software	
  
Personnel	
  
Archive	
  fees	
  

•  How	
  costs	
  will	
  be	
  paid	
  	
  
Request	
  funding!	
  

dorrvs.com	
  
*	
  
NSF’s	
  Vision

DMPs	
  and	
  their	
  evaluation	
  will	
  grow	
  &	
  
change	
  over	
  time	
  	
  
Peer	
  review	
  will	
  determine	
  next	
  steps	
  
Community-­‐driven	
  guidelines	
  	
  
Evaluation	
  will	
  vary	
  with	
  directorate,	
  
division,	
  &	
  program	
  officer	
  

	
  
*Unofficially	
  
A	
  DMP	
  Example	
  (1)	
  
• 
• 

Project	
  name:	
  Effects	
  of	
  temperature	
  and	
  salinity	
  on	
  population	
  growth	
  of	
  the	
  estuarine	
  
copepod,	
  Eurytemora	
  affinis	
  
Project	
  participants	
  and	
  affiliations:	
  	
  
Carly	
  Strasser	
  (University	
  of	
  Alberta	
  and	
  Dalhousie	
  University)	
  
Mark	
  Lewis	
  (University	
  of	
  Alberta)	
  
Claudio	
  DiBacco	
  (Dalhousie	
  University	
  and	
  Bedford	
  Institute	
  of	
  	
  
Oceanography)	
  

•  Funding	
  agency:	
  CAISN	
  (Canadian	
  Aquatic	
  Invasive	
  Species	
  Network)	
  	
  
•  	
   	
  
•  Description	
  of	
  project	
  aims	
  and	
  purpose:	
  
•  	
   We	
  will	
  rear	
  populations	
  of	
  E.	
  affinis	
  in	
  the	
  laboratory	
  at	
  three	
  temperatures	
  and	
  three	
  
salinities	
  (9	
  treatments	
  total).	
  We	
  will	
  document	
  the	
  population	
  from	
  hatching	
  to	
  death,	
  
noting	
  the	
  proportion	
  of	
  individuals	
  in	
  each	
  stage	
  over	
  time.	
  The	
  data	
  collected	
  will	
  be	
  used	
  
to	
  parameterize	
  population	
  models	
  of	
  E.	
  affinis.	
  We	
  will	
  build	
  a	
  model	
  of	
  population	
  growth	
  
as	
  a	
  function	
  of	
  temperature	
  and	
  salinity.	
  This	
  will	
  be	
  useful	
  for	
  studies	
  of	
  invasive	
  copepod	
  
populations	
  in	
  the	
  Northeast	
  Pacific.	
  	
  
•  Video	
  Source:	
  Plankton	
  Copepods.	
  Video.	
  	
  Encyclopædia	
  Britannica	
  Online.	
  	
  Web.	
  13	
  Jun.	
  2011
	
  	
  
A	
  DMP	
  Example	
  (2)	
  
• 
• 

• 

1.	
  Information	
  about	
  data	
  
	
  	
  Every	
  two	
  days,	
  we	
  will	
  subsample	
  E.	
  affinis	
  populations	
  growing	
  at	
  our	
  
treatment	
  conditions.	
  	
  We	
  will	
  use	
  a	
  microscope	
  to	
  identify	
  the	
  stage	
  and	
  
sex	
  of	
  the	
  subsampled	
  individuals.	
  	
  We	
  will	
  document	
  the	
  information	
  first	
  
in	
  a	
  laboratory	
  notebook,	
  then	
  copy	
  the	
  data	
  into	
  an	
  Excel	
  spreadsheet.	
  For	
  
quality	
  control,	
  values	
  will	
  be	
  entered	
  separately	
  by	
  two	
  different	
  people	
  to	
  
ensure	
  accuracy.	
  	
  The	
  Excel	
  spreadsheet	
  will	
  be	
  saved	
  as	
  a	
  comma-­‐
separated	
  value	
  (.csv)	
  file	
  daily	
  and	
  backed	
  up	
  to	
  a	
  server.	
  After	
  all	
  data	
  are	
  
collected,	
  the	
  Excel	
  spreadsheet	
  will	
  be	
  saved	
  as	
  a	
  .csv	
  file	
  and	
  imported	
  
into	
  the	
  program	
  R	
  for	
  statistical	
  analysis.	
  Strasser	
  will	
  be	
  responsible	
  for	
  all	
  
data	
  management	
  during	
  and	
  after	
  data	
  collection.	
  
	
  	
  Our	
  short-­‐term	
  data	
  storage	
  plan,	
  which	
  will	
  be	
  used	
  during	
  the	
  
experiment,	
  will	
  be	
  to	
  save	
  copies	
  of	
  1)	
  the	
  .txt	
  metadata	
  file	
  and	
  2)	
  the	
  
Excel	
  spreadsheet	
  as	
  .csv	
  files	
  to	
  an	
  external	
  drive,	
  and	
  to	
  take	
  the	
  external	
  
drive	
  off	
  site	
  nightly.	
  	
  We	
  will	
  use	
  the	
  Subversion	
  version	
  control	
  system	
  to	
  
update	
  our	
  data	
  and	
  metadata	
  files	
  daily	
  on	
  the	
  University	
  of	
  Alberta	
  
Mathematics	
  Department	
  server.	
  We	
  will	
  also	
  have	
  the	
  laboratory	
  notebook	
  
as	
  a	
  hard	
  copy	
  backup.	
  
A	
  DMP	
  Example	
  (3)	
  
•  2.	
  	
  	
  Metadata	
  format	
  &	
  content	
  
•  	
   We	
  will	
  first	
  document	
  our	
  metadata	
  by	
  taking	
  careful	
  notes	
  in	
  the	
  laboratory	
  

notebook	
  that	
  refer	
  to	
  specific	
  data	
  files	
  and	
  describe	
  all	
  columns,	
  units,	
  
abbreviations,	
  and	
  missing	
  value	
  identifiers.	
  	
  These	
  notes	
  will	
  be	
  transcribed	
  into	
  
a	
  .txt	
  document	
  that	
  will	
  be	
  stored	
  with	
  the	
  data	
  file.	
  	
  After	
  all	
  of	
  the	
  data	
  are	
  
collected,	
  we	
  will	
  then	
  use	
  EML	
  (Ecological	
  Metadata	
  Language)	
  to	
  digitize	
  our	
  
metadata.	
  EML	
  is	
  on	
  of	
  the	
  accepted	
  formats	
  used	
  in	
  Ecology,	
  and	
  works	
  well	
  for	
  the	
  
type	
  of	
  data	
  we	
  will	
  be	
  producing.	
  We	
  will	
  create	
  these	
  metadata	
  using	
  Morpho	
  
software,	
  available	
  through	
  the	
  Knowledge	
  Network	
  for	
  Biocomplexity	
  (KNB).	
  The	
  
documentation	
  and	
  metadata	
  will	
  describe	
  the	
  data	
  files	
  and	
  the	
  context	
  of	
  the	
  
measurements.	
  
A	
  DMP	
  Example	
  (4)	
  
3.	
  	
  Policies	
  for	
  access,	
  sharing	
  &	
  reuse	
  
•  	
   We	
  are	
  required	
  to	
  share	
  our	
  data	
  with	
  the	
  CAISN	
  network	
  after	
  all	
  data	
  
have	
  been	
  collected	
  and	
  metadata	
  have	
  been	
  generated.	
  This	
  should	
  be	
  no	
  
more	
  than	
  6	
  months	
  after	
  the	
  experiments	
  are	
  completed.	
  	
  In	
  order	
  to	
  gain	
  
access	
  to	
  CAISN	
  data,	
  interested	
  parties	
  must	
  contact	
  the	
  CAISN	
  data	
  
manager	
  (data@caisn.ca)	
  or	
  the	
  authors	
  and	
  explain	
  their	
  intended	
  use.	
  	
  	
  
Data	
  requests	
  will	
  be	
  approved	
  by	
  the	
  authors	
  after	
  review	
  of	
  the	
  proposed	
  
use.	
  	
  	
  
•  	
   The	
  authors	
  will	
  retain	
  rights	
  to	
  the	
  data	
  until	
  the	
  resulting	
  publication	
  is	
  
produced,	
  within	
  two	
  years	
  of	
  data	
  production.	
  	
  After	
  publication	
  (or	
  after	
  
two	
  years,	
  whichever	
  is	
  first),	
  the	
  authors	
  will	
  open	
  data	
  to	
  public	
  use.	
  	
  After	
  
publication,	
  we	
  will	
  submit	
  our	
  data	
  to	
  the	
  KNB	
  allowing	
  discovery	
  and	
  use	
  
by	
  the	
  wider	
  scientific	
  community.	
  Interested	
  parties	
  will	
  be	
  able	
  to	
  
download	
  the	
  data	
  directly	
  from	
  KNB	
  without	
  contacting	
  the	
  authors,	
  but	
  
will	
  still	
  be	
  encouraged	
  to	
  give	
  credit	
  to	
  the	
  authors	
  for	
  the	
  data	
  used	
  by	
  
citing	
  a	
  KNB	
  accession	
  number	
  either	
  in	
  the	
  publication’s	
  text	
  or	
  in	
  the	
  
references	
  list.	
  
A	
  DMP	
  Example	
  (5)	
  
4.	
   	
  	
  Long-­‐term	
  storage	
  and	
  data	
  management	
  
	
  The	
  data	
  set	
  will	
  be	
  submitted	
  to	
  KNB	
  for	
  long-­‐term	
  preservation	
  and	
  
storage.	
  	
  The	
  authors	
  will	
  submit	
  metadata	
  in	
  EML	
  format	
  along	
  with	
  
the	
  data	
  to	
  facilitate	
  its	
  reuse.	
  Strasser	
  will	
  be	
  responsible	
  for	
  
updating	
  metadata	
  and	
  data	
  author	
  contact	
  information	
  in	
  the	
  KNB.	
  	
  	
  	
  
•  5.	
  	
  Budget	
  	
  
•  	
   A	
  tablet	
  computer	
  will	
  be	
  used	
  for	
  data	
  collection	
  in	
  the	
  field,	
  which	
  
will	
  cost	
  approximately	
  $500.	
  	
  Data	
  documentation	
  and	
  preparation	
  
for	
  reuse	
  and	
  storage	
  will	
  require	
  approximately	
  one	
  month	
  of	
  salary	
  
for	
  one	
  technician.	
  The	
  technician	
  will	
  be	
  responsible	
  for	
  data	
  entry,	
  
quality	
  control	
  and	
  assurance,	
  and	
  metadata	
  generation.	
  These	
  costs	
  
are	
  included	
  in	
  the	
  budget	
  in	
  lines	
  12-­‐16.	
  
From	
  Flickr	
  by	
  thewmatt	
  
Roadmap	
  
Background	
  
Current	
  DMP	
  tools	
  
A	
  walkthrough	
  of	
  
DMPTool	
  

From	
  Flickr	
  by	
  	
  (Luciano)	
  

DMPTool2	
  
DMPonline:	
  	
  dmponline.dcc.ac.uk	
  

Step-­‐by-­‐step	
  wizard	
  for	
  generating	
  DMP	
  
Create	
  |	
  edit	
  |	
  re-­‐use	
  |	
  share	
  |	
  save	
  |	
  generate	
  	
  
Open	
  to	
  community	
  	
  
From	
  Flickr	
  by	
  Max	
  Chu	
  

dmptool.org	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  
DMPTool	
  Project	
  
•  Partners	
  started	
  working	
  in	
  January	
  2011	
  
•  Developed	
  requirements,	
  divided	
  work	
  
•  Self-­‐funded	
  /	
  In-­‐kind	
  
dmptool.org	
  	
  	
  	
  	
  	
  	
  	
  	
  	
  
•  Free	
  	
  
•  Guides	
  through	
  creating	
  a	
  DMP	
  
•  Helps	
  meet	
  funder	
  requirements	
  	
  
•  Supplies	
  questions	
  	
  
•  Includes	
  explanation/context	
  provided	
  by	
  
the	
  agency	
  
•  Provides	
  links	
  to	
  the	
  agency	
  website	
  	
  
Wait!	
  
Data	
  management	
  planning	
  
is	
  complex	
  &	
  requires	
  dialog	
  
	
  

Range	
  of	
  support	
  &	
  
understanding	
  
	
  

Our	
  focus:	
  	
  
•  simplify	
  &	
  scale	
  the	
  common	
  parts	
  
•  develop	
  community	
  
•  provide	
  incremental	
  improvement	
  
in	
  functionality	
  

From	
  Flickr	
  by	
  ChrisGoldNY	
  
Roadmap	
  
Background	
  	
  
Current	
  DMP	
  tools	
  
A	
  walkthrough	
  of	
  
DMPTool	
  

From	
  Flickr	
  by	
  	
  (Luciano)	
  

DMPTool2	
  
Access	
  
DMPTool	
  can	
  be	
  added	
  to	
  
campus	
  single	
  sign-­‐on	
  
service	
  
Researchers	
  use	
  campus	
  
login	
  to	
  access	
  tool	
  

From	
  Flickr	
  by	
  Clonny	
  

Researchers	
  
like	
  it	
  here	
  
Institution-­‐specific…	
  
•  Help	
  text	
  
•  Links	
  to	
  resources	
  &	
  services	
  
•  Suggested	
  answers	
  
	
  
…at	
  different	
  levels	
  
•  All	
  DMPs	
  
•  All	
  DMPs	
  for	
  a	
  particular	
  
funding	
  agency	
  
•  Question	
  within	
  a	
  data	
  
management	
  plan	
  
	
  

Customized	
  
Resources	
  

From	
  Flickr	
  by	
  lumachrome	
  
From	
  Flickr	
  by	
  OZinOH	
  

DMPTool2	
  	
  
DMPTool	
  Uptake	
  
1000	
  
900	
  

6000	
  

800	
  
5000	
  

700	
  
600	
  

4000	
  

500	
  
3000	
  

400	
  
300	
  

2000	
  

1000	
  

0	
  

Unique	
  Users	
  
Plans	
  
Institutions	
  

200	
  
100	
  
0	
  

Number	
  of	
  Institutions	
  

Number	
  of	
  Plans	
  (solid)	
  &	
  Unique	
  Users	
  (dashed)	
  

7000	
  
DMPTool	
  2:	
  	
  
Responding	
  to	
  the	
  Community	
  	
  
ming	
  
Co
oon!	
  
S
2
Plan	
  
Creators	
  

&	
  

Plan	
  
Administrators	
  
2
Improvements	
  for	
  Plan	
  Creators	
  
•  Collaborative	
  plan	
  creation	
  
•  Role-­‐based	
  user	
  authorization	
  &	
  access	
  
•  Better	
  plan	
  templates	
  &	
  resources	
  
2
New	
  administrator	
  Interface	
  
•  Template	
  creation:	
  
•  Better	
  plan	
  template	
  granularity	
  	
  
	
   	
  discipline,	
  funder,	
  question	
  
What	
  tgranularity	
  
•  Better	
  institution	
  his	
  means	
  for	
  plan	
  
creators:	
  	
  
	
  department,	
  college,	
  lab	
  group,	
  …	
  
•  Better	
  plans	
  
•  Enhanced	
  search	
  and	
  browse	
  of	
  plans	
  
•  Access	
  to	
  m•  More	
  granular	
  help	
  
etrics	
  for	
  reporting	
  &	
  follow-­‐up	
  

•  Local	
  input	
  &	
  assistance	
  
2

Open	
  RESTful	
  API	
  

?	
  
Yelp	
  
APIs	
  

Google	
  Maps	
  
DMPTool	
  

API	
  

Other	
  stuff	
  

•  Carefully	
  thought	
  out	
  code	
  	
  
•  Invisible	
  to	
  user	
  
•  Expose	
  specific	
  functionality	
  
and/or	
  data	
  
•  Other	
  functionality/data	
  
protected	
  
API	
  Benefits	
  

Interactions	
  
Improve	
  functionality	
  
Add	
  more	
  functionality	
  
Combine	
  with	
  their	
  services	
  
	
  

Popularity	
  
IMLS	
  Grant	
  
Improving	
  Data	
  
Stewardship	
  with	
  the	
  
DMPTool	
  
Provide	
  librarians	
  with	
  the	
  	
  
tools	
  and	
  resources	
  	
  
to	
  claim	
  the	
  data	
  management	
  education	
  space	
  
blog.dmptool.org	
  
facebook.com/dmptool	
  
Questions?	
  
Website	
  
Twitter	
  
Blog	
  

dmptool.org	
  
@TheDMPTool	
  
blog.dmptool.org	
  
	
  

Email	
  
Tweet	
  me	
  
My	
  slides	
  

carly.strasser@ucop.edu	
  
@carlystrasser	
  	
  
slideshare.net/carlystrasser	
  
	
  

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Cal Poly - Data Management and the DMPTool

  • 1. From  Flickr  by  OZinOH   The  Data  Management   Planning  Tool   DMPTool       Carly  Strasser      |  @carlystrasser   California  Digital  Library     Cal  Poly   Oct  2013  
  • 2.
  • 3. Roadmap   Background   Current  DMP  tools   A  walkthrough  of   DMPTool   From  Flickr  by    (Luciano)   DMPTool2  
  • 4. From  Flickr  by  US  Army  Environmental  Command   From  Flickr  by    deltaMike   From  Flickr  by    DW0825   C.  Strasser   From  Flickr  by  Flickmor   Courtesey  of  WHOI  
  • 5. Data  management   Documentation   Reproducibility   From  Flickr  by  ~Minnea~  
  • 6. From  Flickr  by    ahockey   DMP s!  
  • 7. What  is  a  data   management  plan?   A  document  that  describes   what  you  will  do  with  your   data  both   during  your  research     and  after  you  complete   your  project   From  Flickr  by  Barbies  Land  
  • 8. From  Flickr  by  401(K)  2013   For  funders:   A  short  plan  submitted   alongside  grant  applications    An  outline  of     –  –  –  –  –  –  what  will  be  collected   methods   But  they   Standards   all  have   different  requirements   Metadata   and  express  them  in   sharing/access   different  ways   long-­‐term  storage    Includes  how  and  why  
  • 9. Why  prepare  a  DMP?   From  Flickr  by  natalinha     •  Saves  time   •  Increases  research   efficiency   •  Satisfies  requirements  
  • 10. When  do  you  plan?   Yes.  
  • 11. When  do  you  plan?   Plan   Proposal   writing   Research   Ideas   Collect   Analyze   Assure   Integrate   Discover   Publication   Describe   Preserve  
  • 12. Remember!   From  Flickr  by  gmacfadyen   •  Keep  your  plan  current   •  Incorporate  changes     •  Use  as  a  guide  for  daily   activities    
  • 13. Where  to  start?   From  Flickr  by  celikins  
  • 14. Small  &  Simple   •  Document  what  you  know  now   •  Share  the  plan  with  your  team   •  Avoid  procrastination  and  immobilization     Where  to  start?  
  • 15. Courtesy  of  Martin  Donnelly   Research  Support   Office   Data  Library  /  Repository   Researcher   DMP?   Unruly   Data   Computing   Support   Faculty  Ethics   Committee   Etc...  
  • 16. Who:  Support  Services  &   Collaborators   Plan  section   Support   Information  about  data   PI,  co-­‐PIs,  research  staff   Metadata  content  &  format   Librarians,  data  repositories   Policies  for  access,  sharing,   reuse   Funder,  institute,  HIPPA,  IRB,   users   Long-­‐term  storage  and  data   management   Librarians,  IT  staff,  data   repositories   Budget   Sponsored  programs  office,   funder  
  • 17. DMPs:  A  Short  History   Liz  Lyon:  Dealing   with  Data     2008   UK  funder  expectations   2009   2009-­‐10  
  • 18. DMPs:  A  Short  History   Across  the  Pond…   Federal  Funding  Accountability   and  Transparency  Act   2006     2010  – present     2010  
  • 19. NSF  DMP  Requirements   From  Grant  Proposal  Guidelines:    DMP  supplement  may  include:   1.  the  types  of  data,  samples,  physical  collections,  software,  curriculum   materials,  and  other  materials  to  be  produced  in  the  course  of  the  project   2.   the  standards  to  be  used  for  data  and  metadata  format  and  content   (where  existing  standards  are  absent  or  deemed  inadequate,  this  should  be   documented  along  with  any  proposed  solutions  or  remedies)   3.   policies  for  access  and  sharing  including  provisions  for  appropriate   protection  of  privacy,  confidentiality,  security,  intellectual  property,  or  other   rights  or  requirements   4.   policies  and  provisions  for  re-­‐use,  re-­‐distribution,  and  the  production  of   derivatives   5.   plans  for  archiving  data,  samples,  and  other  research  products,  and  for   preservation  of  access  to  them  
  • 20. 1.  Types  of  data  &  other  information   •  Types  of  data  produced   •  Relationship  to  existing  data   •  How/when/where  will  the  data  be  captured  or   created?   C.  Strasser   •  How  will  the  data  be  processed?   •  Quality  assurance  &  quality  control  measures   •  Security:  version  control,  backing  up   biology.kenyon.edu   •  Who  will  be  responsible  for  data  management   during/after  project?   From  Flickr  by  Lazurite  
  • 21. 2.  Data  &  metadata  standards   •  What  metadata  are  needed  to  make  the  data  meaningful?   •  How  will  you  create  or  capture  these  metadata?     Wired.com   •  Why  have  you  chosen  particular  standards  and  approaches   for  metadata?  
  • 22. 3.  Policies  for  access  &  sharing   4.  Policies  for  re-­‐use  &  re-­‐distribution   •  Are  you  under  any  obligation  to  share  data?     •  How,  when,  &  where  will  you  make  the  data  available?     •  What  is  the  process  for  gaining  access  to  the  data?     •  Who  owns  the  copyright  and/or  intellectual  property?   •  •  •  •  •  •  Will  you  retain  rights  before  opening  data  to  wider  use?  How  long?   Are  permission  restrictions  necessary?   Embargo  periods  for  political/commercial/patent  reasons?     Ethical  and  privacy  issues?   Who  are  the  foreseeable  data  users?   How  should  your  data  be  cited?  
  • 23. 5.  Plans  for  archiving  &  preservation   •  What  data  will  be  preserved  for  the  long  term?  For  how  long?       •  Where  will  data  be  preserved?   •  What  data  transformations  need  to  occur  before   preservation?   •  What  metadata  will  be  submitted   alongside  the  datasets?   •  Who  will  be  responsible  for  preparing   data  for  preservation?  Who  will  be  the   main  contact  person  for  the  archived   data?   From  Flickr  by  theManWhoSurfedTooMuch  
  • 24. Don’t  forget:  Budget   •  Costs  of  data  preparation  &  documentation   Hardware,  software   Personnel   Archive  fees   •  How  costs  will  be  paid     Request  funding!   dorrvs.com  
  • 25. *   NSF’s  Vision DMPs  and  their  evaluation  will  grow  &   change  over  time     Peer  review  will  determine  next  steps   Community-­‐driven  guidelines     Evaluation  will  vary  with  directorate,   division,  &  program  officer     *Unofficially  
  • 26. A  DMP  Example  (1)   •  •  Project  name:  Effects  of  temperature  and  salinity  on  population  growth  of  the  estuarine   copepod,  Eurytemora  affinis   Project  participants  and  affiliations:     Carly  Strasser  (University  of  Alberta  and  Dalhousie  University)   Mark  Lewis  (University  of  Alberta)   Claudio  DiBacco  (Dalhousie  University  and  Bedford  Institute  of     Oceanography)   •  Funding  agency:  CAISN  (Canadian  Aquatic  Invasive  Species  Network)     •      •  Description  of  project  aims  and  purpose:   •    We  will  rear  populations  of  E.  affinis  in  the  laboratory  at  three  temperatures  and  three   salinities  (9  treatments  total).  We  will  document  the  population  from  hatching  to  death,   noting  the  proportion  of  individuals  in  each  stage  over  time.  The  data  collected  will  be  used   to  parameterize  population  models  of  E.  affinis.  We  will  build  a  model  of  population  growth   as  a  function  of  temperature  and  salinity.  This  will  be  useful  for  studies  of  invasive  copepod   populations  in  the  Northeast  Pacific.     •  Video  Source:  Plankton  Copepods.  Video.    Encyclopædia  Britannica  Online.    Web.  13  Jun.  2011    
  • 27. A  DMP  Example  (2)   •  •  •  1.  Information  about  data      Every  two  days,  we  will  subsample  E.  affinis  populations  growing  at  our   treatment  conditions.    We  will  use  a  microscope  to  identify  the  stage  and   sex  of  the  subsampled  individuals.    We  will  document  the  information  first   in  a  laboratory  notebook,  then  copy  the  data  into  an  Excel  spreadsheet.  For   quality  control,  values  will  be  entered  separately  by  two  different  people  to   ensure  accuracy.    The  Excel  spreadsheet  will  be  saved  as  a  comma-­‐ separated  value  (.csv)  file  daily  and  backed  up  to  a  server.  After  all  data  are   collected,  the  Excel  spreadsheet  will  be  saved  as  a  .csv  file  and  imported   into  the  program  R  for  statistical  analysis.  Strasser  will  be  responsible  for  all   data  management  during  and  after  data  collection.      Our  short-­‐term  data  storage  plan,  which  will  be  used  during  the   experiment,  will  be  to  save  copies  of  1)  the  .txt  metadata  file  and  2)  the   Excel  spreadsheet  as  .csv  files  to  an  external  drive,  and  to  take  the  external   drive  off  site  nightly.    We  will  use  the  Subversion  version  control  system  to   update  our  data  and  metadata  files  daily  on  the  University  of  Alberta   Mathematics  Department  server.  We  will  also  have  the  laboratory  notebook   as  a  hard  copy  backup.  
  • 28. A  DMP  Example  (3)   •  2.      Metadata  format  &  content   •    We  will  first  document  our  metadata  by  taking  careful  notes  in  the  laboratory   notebook  that  refer  to  specific  data  files  and  describe  all  columns,  units,   abbreviations,  and  missing  value  identifiers.    These  notes  will  be  transcribed  into   a  .txt  document  that  will  be  stored  with  the  data  file.    After  all  of  the  data  are   collected,  we  will  then  use  EML  (Ecological  Metadata  Language)  to  digitize  our   metadata.  EML  is  on  of  the  accepted  formats  used  in  Ecology,  and  works  well  for  the   type  of  data  we  will  be  producing.  We  will  create  these  metadata  using  Morpho   software,  available  through  the  Knowledge  Network  for  Biocomplexity  (KNB).  The   documentation  and  metadata  will  describe  the  data  files  and  the  context  of  the   measurements.  
  • 29. A  DMP  Example  (4)   3.    Policies  for  access,  sharing  &  reuse   •    We  are  required  to  share  our  data  with  the  CAISN  network  after  all  data   have  been  collected  and  metadata  have  been  generated.  This  should  be  no   more  than  6  months  after  the  experiments  are  completed.    In  order  to  gain   access  to  CAISN  data,  interested  parties  must  contact  the  CAISN  data   manager  (data@caisn.ca)  or  the  authors  and  explain  their  intended  use.       Data  requests  will  be  approved  by  the  authors  after  review  of  the  proposed   use.       •    The  authors  will  retain  rights  to  the  data  until  the  resulting  publication  is   produced,  within  two  years  of  data  production.    After  publication  (or  after   two  years,  whichever  is  first),  the  authors  will  open  data  to  public  use.    After   publication,  we  will  submit  our  data  to  the  KNB  allowing  discovery  and  use   by  the  wider  scientific  community.  Interested  parties  will  be  able  to   download  the  data  directly  from  KNB  without  contacting  the  authors,  but   will  still  be  encouraged  to  give  credit  to  the  authors  for  the  data  used  by   citing  a  KNB  accession  number  either  in  the  publication’s  text  or  in  the   references  list.  
  • 30. A  DMP  Example  (5)   4.      Long-­‐term  storage  and  data  management    The  data  set  will  be  submitted  to  KNB  for  long-­‐term  preservation  and   storage.    The  authors  will  submit  metadata  in  EML  format  along  with   the  data  to  facilitate  its  reuse.  Strasser  will  be  responsible  for   updating  metadata  and  data  author  contact  information  in  the  KNB.         •  5.    Budget     •    A  tablet  computer  will  be  used  for  data  collection  in  the  field,  which   will  cost  approximately  $500.    Data  documentation  and  preparation   for  reuse  and  storage  will  require  approximately  one  month  of  salary   for  one  technician.  The  technician  will  be  responsible  for  data  entry,   quality  control  and  assurance,  and  metadata  generation.  These  costs   are  included  in  the  budget  in  lines  12-­‐16.  
  • 31. From  Flickr  by  thewmatt  
  • 32. Roadmap   Background   Current  DMP  tools   A  walkthrough  of   DMPTool   From  Flickr  by    (Luciano)   DMPTool2  
  • 33. DMPonline:    dmponline.dcc.ac.uk   Step-­‐by-­‐step  wizard  for  generating  DMP   Create  |  edit  |  re-­‐use  |  share  |  save  |  generate     Open  to  community    
  • 34. From  Flickr  by  Max  Chu   dmptool.org                    
  • 35. DMPTool  Project   •  Partners  started  working  in  January  2011   •  Developed  requirements,  divided  work   •  Self-­‐funded  /  In-­‐kind  
  • 36. dmptool.org                     •  Free     •  Guides  through  creating  a  DMP   •  Helps  meet  funder  requirements     •  Supplies  questions     •  Includes  explanation/context  provided  by   the  agency   •  Provides  links  to  the  agency  website    
  • 37. Wait!   Data  management  planning   is  complex  &  requires  dialog     Range  of  support  &   understanding     Our  focus:     •  simplify  &  scale  the  common  parts   •  develop  community   •  provide  incremental  improvement   in  functionality   From  Flickr  by  ChrisGoldNY  
  • 38. Roadmap   Background     Current  DMP  tools   A  walkthrough  of   DMPTool   From  Flickr  by    (Luciano)   DMPTool2  
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  • 51. Access   DMPTool  can  be  added  to   campus  single  sign-­‐on   service   Researchers  use  campus   login  to  access  tool   From  Flickr  by  Clonny   Researchers   like  it  here  
  • 52. Institution-­‐specific…   •  Help  text   •  Links  to  resources  &  services   •  Suggested  answers     …at  different  levels   •  All  DMPs   •  All  DMPs  for  a  particular   funding  agency   •  Question  within  a  data   management  plan     Customized   Resources   From  Flickr  by  lumachrome  
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  • 54. From  Flickr  by  OZinOH   DMPTool2    
  • 55. DMPTool  Uptake   1000   900   6000   800   5000   700   600   4000   500   3000   400   300   2000   1000   0   Unique  Users   Plans   Institutions   200   100   0   Number  of  Institutions   Number  of  Plans  (solid)  &  Unique  Users  (dashed)   7000  
  • 56. DMPTool  2:     Responding  to  the  Community     ming   Co oon!   S
  • 57. 2 Plan   Creators   &   Plan   Administrators  
  • 58. 2 Improvements  for  Plan  Creators   •  Collaborative  plan  creation   •  Role-­‐based  user  authorization  &  access   •  Better  plan  templates  &  resources  
  • 59. 2 New  administrator  Interface   •  Template  creation:   •  Better  plan  template  granularity        discipline,  funder,  question   What  tgranularity   •  Better  institution  his  means  for  plan   creators:      department,  college,  lab  group,  …   •  Better  plans   •  Enhanced  search  and  browse  of  plans   •  Access  to  m•  More  granular  help   etrics  for  reporting  &  follow-­‐up   •  Local  input  &  assistance  
  • 62. DMPTool   API   Other  stuff   •  Carefully  thought  out  code     •  Invisible  to  user   •  Expose  specific  functionality   and/or  data   •  Other  functionality/data   protected  
  • 63. API  Benefits   Interactions   Improve  functionality   Add  more  functionality   Combine  with  their  services     Popularity  
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  • 66. IMLS  Grant   Improving  Data   Stewardship  with  the   DMPTool   Provide  librarians  with  the     tools  and  resources     to  claim  the  data  management  education  space  
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  • 70. Questions?   Website   Twitter   Blog   dmptool.org   @TheDMPTool   blog.dmptool.org     Email   Tweet  me   My  slides   carly.strasser@ucop.edu   @carlystrasser     slideshare.net/carlystrasser