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INTRODUCTION ,COURSE
OVER VIEW
MLS Level 7
Ms.Elham Ali Saad
Objectives
• Discuss different type of patient’s sample
• Define&Explain substance of clinical interest in many different
situation
• List Component of each test ?
• Compare between different Types of results obtained in the
laboratories
• Compare between different Types of tests in clinical laboratories?
• Describe different Types of equipment & instruments are used in
clinical laboratories
• Discuss Important consideration in using tests, equipment's &
instruments
Function of the clinical lab
• Carry out analysis and investigations on patient’s
samples upon to request of the doctor to obtain
meaningful and timely results which will help the doctor
in the proper diagnosis , treatment and management of
the patient condition .
• The patient sample can be any type
of material obtained from the patient
which include;
-Whole blood -plasma -serum
-CSF -synovial fluid
-Amniotic fluid -saliva -pericardial fluid
-sweat -sputum -plural
fluid
-peritoneal fluid -semen -body swabs
-urine -Body tissues (biopsies
and needle aspirations)
• Substances of clinical interest are those which are
affected directly or indirectly by the disease.
• The effect of disease on such substances can be
increase , decrease or presence of the substance
• Components of tests:
patients sample+ specific reagents+ means of identification
• Substances of clinical interest that may be increased
or decreased due to disease include;
-RBC -WBC -platelets -Hb -Hct -PT
-PTT -Na -K -Cl -Ca -Mg
-PO2 -PCO2 -glucose -protein -albumin
-γ-globulin (IgG , IgM , IgA)
-Enzymes (ALP , AST , ALT , GGT….)
-Ammonia -urea -creatinine -cholesterol -TG
-Hormones (cortisol , aldosterone , GH ,T3 , T4 , PTH….)
• Substances of clinical interest that their presence
may indicate the presence of disease include;
-Bacteria -Parasites -Viruses
-Tumor Markers (AFP , CEA , PSA…)
-Abnormal cells or tissues
• Reagents of the test include:
-Diluent (H2o , 0.9%NaCl , other solutions)
-Solvents (ethanol, acetone, iso-butanol,
petroleum ether , other organic and aqueous
solvents)
-Dyes (giemsa stain, wright stain, BCG,
hemotoxylin, gram stain , malachite green…)
-Buffer : are used when the reaction required
specific pH (acidic , neutral or alkaline pH)
-Catalysts :
Used to lower the energy requirement for the progress of
the reaction and speed up the reaction
 It can be chemicals or substances such as : (Mg, Ag, Urea ,
Caffeine)
They can be also biological (i.e. enzymes) such as
(dehydrogenases , oxidases , reducates)
-Reaction solution:
 Are chemicals which are prepared at specified
concentration with specific procedure.
 They could be just one single compound (AgCl ,HClO4
, H2O2)
 In many cases , the reaction solutions involve two or
more compounds which are added in one step (e.g.:
biuret reagent (protein) , jaffe-reagent (creatinine)
Types of results obtained in the
laboratories
Types of tests
1- Screening tests:
Characteristic Simple test
Cheap to perform
involve 1 single step;(mixing 1 drop of
sample + 1 drop of reagent = formation of
product by visual means (naked ye or light
microscope).
Aim of this
type
applied to screen for the presence or
absence of specific disease or disorder
Place to
performed
outside the lab or hospital
Requirements
Require minimum amounts of reagents and
equipment's
Don’t require high technical skills
Results
quickly and clearly obtained
Results can be easily interrupted
either qualitative or semi-quantitative
Results obtained are +ve results must be
confirmed by further more and accurate
specific results.
2- Confirmatory Tests:
Characteristic More complex and number of steps
Tests are more sensitive and specific
than screening test
Aim of this type Are used to confirm the positive results
obtained from screening test
Requirements
Require specialized equipments and
instruments
Are performed in the lab
Require technical skills and experience
Results
Results more accurate and precise than
screening test
Results can be qualitative , semi-quantitative
or quantitative
If the results is also +ve then the patient is
referred for medical examination
If the results is negative , then the disease or
disorder is ruled out (no disease)
3- Diagnostic tests:
Characteristic  expensive and technically demanding
 not necessary confirmatory tests but
confirmatory test may be diagnostic
 Examples:
- High level of amylase in both blood and urine are
diagnostic for acute pancereatitis
- High level of HCG in women is diagnostoc for
pregnancy
- High level of urea and creatinine are diagnostic foe
renal abnormality
- Low level of cortisol in blood is diagnostic for
addison’s disease
- High level of glucose in GTT are diagnostic for diabetes
mellitus
Place of
performed
Usually performed in the lab
Aim of this
type
check for specific substances which are
indicative for the presence of disease or
disorder.
Requirements
Require skill , experience, and good
background of pathophysiology of the disease
Require instruments and equipments of high
accuracy and precision
Require tests with high sensitivity and
specificity
Results Can be qualitative , semi-quantitative or
quantitative
In quantitative and semi-quantitative results
the severity of the disease may be related
to the level of the substance
4- Definitive test:
Characteristics Highly advanced, specialized and complex
procedures
 They include ; PCR , Mass-spectroscopy ,
HPLC , GC
Aim of this
type
1-Detection of inherited disorder such as; a.a
metabolism abnormalities, f.a metabolism
abnormalities, cystic fibrosis , muscular
dystrophy ,coagulation abnormalities , Hb
abnormalities and many other.
2-It is also being applied to detect the presence
of viruses , bacteria and other microorganisms
Aim of this type
3-detect the presence of specific causative
agents such as ; genes , gene mutations ,
specific metabolites or specific cells
This type of tests are able to show disease
variations
Requirements
 high level of technical skill , good
experience and background on advanced
techniques
high complex and advanced instruments and
equipments
Results Usually qualitative
Types of equipments and
instruments are used in clinical
laboratoriesA)Basic equipments :
Example
- Pipette -Glassware
- -Plastic ware
-Mixer -Balances
-Fridge -Safety cabinet
-Freezer -Fume-cupboard
-Centrifuge
B)Single application instruments:
-Example:
light microscope -spectrophotometer
single channel counter
single test analyzers (PH Pco2,Po2 , Na, K , Cl,
Hb-meter)
-Can be linked to computer for operations and
results
-Very important in high capacity(large) laboratory
-Reduce the amount of time ,effort and
space required for tests.
-Example
1-automated hematology analyzer :
measure RBCs , WBCs ,platelets , Hb,
Differential , Hct , and calculate MCV ,
MCHC)
2-automated chemistry
analyzer(measure number of analytes
C) Multi-tests (multi-sample instruments):
-usually fully or partially automated
-Can carry out more than one measurements
-Can process many samples
-Depend on electronic and computer controls
-Combine various technique and instruments in one large
system as :
(pipetting+spectrophotometer+ISE+incubator+mixer+
Washing + centrifugation+calculation)
Important consideration in using
tests , equipment's & instruments
-title/name -purpose and aim
-principle of operation the instruments
-principle of test -proper methodology
-reagent preparation -type of specimen
-collection and handling of specimen
-transportation
-processing and storage of specimen
-precaution and source of errors
-safety consideration(electrical, fire,biological,chemical ,waste)
-use of standards , calibrators and controls
-results calculation and interpretation
-installation and maintenance of instruments
-sensitivity and specificity ,accuracy and precision of test
and instruments .
-updating/changing of tests and instruments
-always time manage and organize your procedures and
instruments
 THANK YOU 

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Lecture 1 .introduction , course over view MLS level 7

  • 1. INTRODUCTION ,COURSE OVER VIEW MLS Level 7 Ms.Elham Ali Saad
  • 2. Objectives • Discuss different type of patient’s sample • Define&Explain substance of clinical interest in many different situation • List Component of each test ? • Compare between different Types of results obtained in the laboratories • Compare between different Types of tests in clinical laboratories? • Describe different Types of equipment & instruments are used in clinical laboratories • Discuss Important consideration in using tests, equipment's & instruments
  • 3. Function of the clinical lab • Carry out analysis and investigations on patient’s samples upon to request of the doctor to obtain meaningful and timely results which will help the doctor in the proper diagnosis , treatment and management of the patient condition .
  • 4. • The patient sample can be any type of material obtained from the patient which include; -Whole blood -plasma -serum -CSF -synovial fluid -Amniotic fluid -saliva -pericardial fluid -sweat -sputum -plural fluid -peritoneal fluid -semen -body swabs -urine -Body tissues (biopsies and needle aspirations)
  • 5. • Substances of clinical interest are those which are affected directly or indirectly by the disease. • The effect of disease on such substances can be increase , decrease or presence of the substance • Components of tests: patients sample+ specific reagents+ means of identification
  • 6. • Substances of clinical interest that may be increased or decreased due to disease include; -RBC -WBC -platelets -Hb -Hct -PT -PTT -Na -K -Cl -Ca -Mg -PO2 -PCO2 -glucose -protein -albumin -γ-globulin (IgG , IgM , IgA) -Enzymes (ALP , AST , ALT , GGT….) -Ammonia -urea -creatinine -cholesterol -TG -Hormones (cortisol , aldosterone , GH ,T3 , T4 , PTH….)
  • 7. • Substances of clinical interest that their presence may indicate the presence of disease include; -Bacteria -Parasites -Viruses -Tumor Markers (AFP , CEA , PSA…) -Abnormal cells or tissues
  • 8. • Reagents of the test include: -Diluent (H2o , 0.9%NaCl , other solutions) -Solvents (ethanol, acetone, iso-butanol, petroleum ether , other organic and aqueous solvents) -Dyes (giemsa stain, wright stain, BCG, hemotoxylin, gram stain , malachite green…) -Buffer : are used when the reaction required specific pH (acidic , neutral or alkaline pH)
  • 9. -Catalysts : Used to lower the energy requirement for the progress of the reaction and speed up the reaction  It can be chemicals or substances such as : (Mg, Ag, Urea , Caffeine) They can be also biological (i.e. enzymes) such as (dehydrogenases , oxidases , reducates)
  • 10. -Reaction solution:  Are chemicals which are prepared at specified concentration with specific procedure.  They could be just one single compound (AgCl ,HClO4 , H2O2)  In many cases , the reaction solutions involve two or more compounds which are added in one step (e.g.: biuret reagent (protein) , jaffe-reagent (creatinine)
  • 11. Types of results obtained in the laboratories
  • 12. Types of tests 1- Screening tests: Characteristic Simple test Cheap to perform involve 1 single step;(mixing 1 drop of sample + 1 drop of reagent = formation of product by visual means (naked ye or light microscope). Aim of this type applied to screen for the presence or absence of specific disease or disorder Place to performed outside the lab or hospital
  • 13. Requirements Require minimum amounts of reagents and equipment's Don’t require high technical skills Results quickly and clearly obtained Results can be easily interrupted either qualitative or semi-quantitative Results obtained are +ve results must be confirmed by further more and accurate specific results.
  • 14. 2- Confirmatory Tests: Characteristic More complex and number of steps Tests are more sensitive and specific than screening test Aim of this type Are used to confirm the positive results obtained from screening test Requirements Require specialized equipments and instruments Are performed in the lab Require technical skills and experience
  • 15. Results Results more accurate and precise than screening test Results can be qualitative , semi-quantitative or quantitative If the results is also +ve then the patient is referred for medical examination If the results is negative , then the disease or disorder is ruled out (no disease)
  • 16. 3- Diagnostic tests: Characteristic  expensive and technically demanding  not necessary confirmatory tests but confirmatory test may be diagnostic  Examples: - High level of amylase in both blood and urine are diagnostic for acute pancereatitis - High level of HCG in women is diagnostoc for pregnancy - High level of urea and creatinine are diagnostic foe renal abnormality - Low level of cortisol in blood is diagnostic for addison’s disease - High level of glucose in GTT are diagnostic for diabetes mellitus
  • 17. Place of performed Usually performed in the lab Aim of this type check for specific substances which are indicative for the presence of disease or disorder. Requirements Require skill , experience, and good background of pathophysiology of the disease Require instruments and equipments of high accuracy and precision Require tests with high sensitivity and specificity
  • 18. Results Can be qualitative , semi-quantitative or quantitative In quantitative and semi-quantitative results the severity of the disease may be related to the level of the substance
  • 19. 4- Definitive test: Characteristics Highly advanced, specialized and complex procedures  They include ; PCR , Mass-spectroscopy , HPLC , GC Aim of this type 1-Detection of inherited disorder such as; a.a metabolism abnormalities, f.a metabolism abnormalities, cystic fibrosis , muscular dystrophy ,coagulation abnormalities , Hb abnormalities and many other. 2-It is also being applied to detect the presence of viruses , bacteria and other microorganisms
  • 20. Aim of this type 3-detect the presence of specific causative agents such as ; genes , gene mutations , specific metabolites or specific cells This type of tests are able to show disease variations Requirements  high level of technical skill , good experience and background on advanced techniques high complex and advanced instruments and equipments Results Usually qualitative
  • 21. Types of equipments and instruments are used in clinical laboratoriesA)Basic equipments : Example - Pipette -Glassware - -Plastic ware -Mixer -Balances -Fridge -Safety cabinet -Freezer -Fume-cupboard -Centrifuge
  • 22. B)Single application instruments: -Example: light microscope -spectrophotometer single channel counter single test analyzers (PH Pco2,Po2 , Na, K , Cl, Hb-meter) -Can be linked to computer for operations and results -Very important in high capacity(large) laboratory
  • 23. -Reduce the amount of time ,effort and space required for tests. -Example 1-automated hematology analyzer : measure RBCs , WBCs ,platelets , Hb, Differential , Hct , and calculate MCV , MCHC) 2-automated chemistry analyzer(measure number of analytes
  • 24. C) Multi-tests (multi-sample instruments): -usually fully or partially automated -Can carry out more than one measurements -Can process many samples -Depend on electronic and computer controls -Combine various technique and instruments in one large system as : (pipetting+spectrophotometer+ISE+incubator+mixer+ Washing + centrifugation+calculation)
  • 25. Important consideration in using tests , equipment's & instruments -title/name -purpose and aim -principle of operation the instruments -principle of test -proper methodology -reagent preparation -type of specimen -collection and handling of specimen -transportation -processing and storage of specimen -precaution and source of errors
  • 26. -safety consideration(electrical, fire,biological,chemical ,waste) -use of standards , calibrators and controls -results calculation and interpretation -installation and maintenance of instruments -sensitivity and specificity ,accuracy and precision of test and instruments . -updating/changing of tests and instruments -always time manage and organize your procedures and instruments