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Drugs and Bugs
ICU acquired infections and microbiology issues in the ICU

Dr Andrew Ferguson
Curriculum (Annex C and F)
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Manages antimicrobial drug therapy
Epidemiology and prevention of infection in the ICU
Types of organisms - emergence of resistant strains, mode of transfer, opportunistic and nosocomial infections;
difference between contamination, colonisation and infection
Local patterns of bacterial resistance and antibiotic policy
Indications, complications, interactions, selection, monitoring, and efficacy of common antimicrobial drugs (antibacterial,
antifungal, antiviral, antiprotozoal, antihelminthics)
Indications for and basic interpretation of drug concentrations in blood or plasma
Principles of prescribing initial empirical therapy and modification / refinement with further clinical and microbiological
information
Impact of drug therapy on organ-system function
Risk factors for nosocomial infection and infection control measures to limit its occurrence
Ventilator associated pneumonia: definition, pathogenesis and prevention
Risks of inappropriate antimicrobial therapy on the patient and the environment
Requirements for microbiological surveillance and clinical sampling
Effects of concomitant treatment and/or co-morbid conditions on an individual patient's response to treatment
Prophylactic therapies and indications for their use
Circumstances when treatment is unnecessary
Concept of gastrointestinal microbial translocation
Safe use of therapies which modify the inflammatory response
Collaborate with microbiologists / infectious diseases clinicians to link clinical, laboratory and local (hospital / regional /
national) microbiological data
Establish a management plan based on clinical and laboratory information
Prescribe appropriate antimicrobial therapy based on history, examination and preliminary investigations
Scenarios
• 47 year old with community-acquired pneumonia
• 65 year old with perforated colonic diverticulum
• 48 year old alcoholic with delayed presentation of
perforated DU
• 18 year old diabetic with axillary abscess and septic
shock
• 75 year old with central line sepsis
• 65 year old with recurrent renal stones and UTI
Antimicrobial therapy
Potential drug targets 1
• Defensive structures – cell wall
– Peptidoglycan based
– Multiple similar layers (gram +ve) with teichoic acids
– 2 membranes (gram –ve) with LPS on outer
Potential drug targets 2
• Replication enzymes – DNA processes
– DNA gyrase (a topoisomerase) to relax supercoils
– Helicase to separate the strands
– Primase - RNA polymerase => primers for DNA replication.
– DNA polymerase I: DNA repair

– DNA polymerase III: synthesize complementary DNA strands.
– DNA polymerases II, IV, V: DNA repair
– DNA ligase: forms covalent bonds between fragments
Potential drug targets 3
• Protein synthesis machinery - Ribosome

50S

30S (a 16S rRNA + ribosomal proteins)
How antibiotics work
Disrupt cell wall

b-lactams inhibit peptidoglycan synthesis
Vancomycin disrupts peptidoglycan cross-links

Disrupt membranes

Polymyxins detergent-like action on membrane

Inhibit protein synthesis
(ribosome)

Inhibit DNA/RNA processes

Disrupt metabolism

Aminoglycosides irreversibly bind 30S proteins
Tetracyclines block t-RNA binding to 30S
Chloramphenicol, Macrolides, Clindamycin, Linezolid
bind 50S
Quinolones inhibit DNA gyrase/topoisomaerase
Metronidazole metabolic product disrupts DNA
Rifampicin binds DNA-dependent RNA polymerase
Fusidic acid inhibits RNA transferase
Sulfonamides, dapsone, trimethoprim disrupt folate
synthesis
Bactericidal v Bacteriostatic
Bactericidal

Bacteriostatic

b-lactams

Macrolides (clarithormycin etc.)

Nitroimidazoles (metronidazole)

Tetracyclines

Rifampicin

Lincosamides (Clindamycin)

Aminoglycosides

Fusidic acid

Quinolones

Chloramphenicol

Polymyxins e.g. colistin

? Trimethoprim/sulfamethoxazole

? Trimethoprim/sulfamethoxazole

Oxazolidinones e.g. Linezolid (in general)

Glycopeptides e.g. vanco, teico
Linezolid (some Streptococci)
Lipopeptides e.g. Daptomycin
Quinupristin/dalfpristin (in combo)

Tigecycline
Pharmacodynamics of effect
1. Concentration-dependent killing
2. Time-dependent killing – with no prolonged effect
3. Time dependent killing – with prolonged effect
• Minimum Inhibitory Concentration (MIC)
– Lowest [ ] that inhibits growth after 16-20 hrs incubation.

• CMax = Peak antibiotic concentration
• Area under the curve (AUC)

– Amount of antibiotic delivered over a specific time.
Concentration-dependent killing
• Moderate to prolonged persistent effects
• Goal of dosing = maximize concentrations
• PK parameter determining efficacy
– CMax
– CMax:MIC ratio (>10 for AG’s)
– AUC/MIC (>125 for FQ’s, 70 for metronidazole)

• Examples
– Aminoglycosides, Flouroquinolones, Colistin,
Metronidazole, Ampho B.
Time dependent killing 1
• Prolonged persistent effects
• Goal of dosing = optimize amount of drug
• PK parameter determining efficacy
– AUC/MIC
– Time above MIC

• Examples
– Vancomycin, tetracyclines, fluconazole.
Time dependent killing 2
• Without prolonged effects
• Goal of dosing = maximize exposure duration
• PK parameter determining efficacy
– Time above MIC (T>MIC)
• Time above MIC >70% for b-lactams, >85% linezolid

– AUC/MIC
• AUC/MIC > 80

• Examples
– Beta lactam, macrolides, clindamycin, flucytosine,
linezolid.
Why treatment fails
• You’ve given the wrong drug at the right time!

Really
BAD

• You’ve given the right drug at the wrong time!

BAD

• You’ve given too small a dose of the right drug BAD
• There’s an insufficient concentration at site
• The drug’s being cleared too fast BAD
• They’re not infected!!!

Really
BAD

BAD
PK/PD alterations in critical illness
• Poor tissue penetration
– Microvascular shutdown
– Interstitial fluid

• Increased Vd - interstitial fluid volume
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Rapid fluid boluses
Pleural effusions
Ascites
Hypoalbuminaemia

• Increased clearance
– Severe hyperdynamic circulation
• Young polytrauma and sepsis – renal hyperfiltration

– Severe burns
– Leukaemia
Optimising use
• Shock & Awe!!!
– Aggressive dosing up-front

• Short, sharp courses
• De-escalation
– Of dose, based on response and PK/PD
– Of drug, based on cultures & sensitivity

• Antibiotic cycling
• PK/PD modelling
• Dose strategies – prolonged or continuous infusion
Organisms
COCCI

• Staphylococci
• Streptococci
• Enterococci

BACILLI

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OTHER

Gram positives

• Yeasts

Corynebacterium spp (diphtheroids)
Clostridium
Listeria
Bacillus spp
BACILLI

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H. influenzae
B. pertussis
Brucella spp
Francisella spp
Legionella spp

Vibrio spp
Pseudomonas spp
Proteus spp
Campylobacter spp
Yersinia spp
Shigella spp
Salmonella spp

COCCI

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• N. meningitidis
• N. gonorrhoeae

BACILLI

COCCO-BACILLI

Gram negatives

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Klebsiella spp
E. coli
Enterobacter
Citrobacter
Serratia

Fermenters
Mob-rule
• Quorum sensing
– Signals between bacteria
– Same or different spp

• Effects
– Inhibition of growth (some species)
– Increased virulence e.g. Pseudomonas
Antibiotic resistance
Antimicrobial resistance
Antibiotic

Mechanism of resistance

Chloramphenicol

Reduced uptake into cell

Tetracycline

Active efflux from the cell

β-lactams, Erythromycin, Lincomycin

Eliminates or reduces binding of antibiotic to cell
target

β-lactams, Aminoglycosides,
Chloramphenicol

Enzymatic cleavage or modification to inactivate
antibiotic molecule

Sulfonamides, Trimethoprim

Metabolic bypass of inhibited reaction

Sulfonamides, Trimethoprim

Overproduction of antibiotic target (titration)
Transmission of resistance
DNA TRANSFER from dead organisms

PLASMIDS

+ MUTATION

VIRAL TRANSFER (PHAGE)
Antibiotic prophylaxis
Risk factors for SSI
Know the guidelines!
Drugs against bugs - antibiotics in the ICU
Drugs against bugs - antibiotics in the ICU
Drugs against bugs - antibiotics in the ICU
Drugs against bugs - antibiotics in the ICU

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Drugs against bugs - antibiotics in the ICU

  • 1. Drugs and Bugs ICU acquired infections and microbiology issues in the ICU Dr Andrew Ferguson
  • 2. Curriculum (Annex C and F) • • • • • • • • • • • • • • • • • • • • • Manages antimicrobial drug therapy Epidemiology and prevention of infection in the ICU Types of organisms - emergence of resistant strains, mode of transfer, opportunistic and nosocomial infections; difference between contamination, colonisation and infection Local patterns of bacterial resistance and antibiotic policy Indications, complications, interactions, selection, monitoring, and efficacy of common antimicrobial drugs (antibacterial, antifungal, antiviral, antiprotozoal, antihelminthics) Indications for and basic interpretation of drug concentrations in blood or plasma Principles of prescribing initial empirical therapy and modification / refinement with further clinical and microbiological information Impact of drug therapy on organ-system function Risk factors for nosocomial infection and infection control measures to limit its occurrence Ventilator associated pneumonia: definition, pathogenesis and prevention Risks of inappropriate antimicrobial therapy on the patient and the environment Requirements for microbiological surveillance and clinical sampling Effects of concomitant treatment and/or co-morbid conditions on an individual patient's response to treatment Prophylactic therapies and indications for their use Circumstances when treatment is unnecessary Concept of gastrointestinal microbial translocation Safe use of therapies which modify the inflammatory response Collaborate with microbiologists / infectious diseases clinicians to link clinical, laboratory and local (hospital / regional / national) microbiological data Establish a management plan based on clinical and laboratory information Prescribe appropriate antimicrobial therapy based on history, examination and preliminary investigations
  • 3. Scenarios • 47 year old with community-acquired pneumonia • 65 year old with perforated colonic diverticulum • 48 year old alcoholic with delayed presentation of perforated DU • 18 year old diabetic with axillary abscess and septic shock • 75 year old with central line sepsis • 65 year old with recurrent renal stones and UTI
  • 5. Potential drug targets 1 • Defensive structures – cell wall – Peptidoglycan based – Multiple similar layers (gram +ve) with teichoic acids – 2 membranes (gram –ve) with LPS on outer
  • 6. Potential drug targets 2 • Replication enzymes – DNA processes – DNA gyrase (a topoisomerase) to relax supercoils – Helicase to separate the strands – Primase - RNA polymerase => primers for DNA replication. – DNA polymerase I: DNA repair – DNA polymerase III: synthesize complementary DNA strands. – DNA polymerases II, IV, V: DNA repair – DNA ligase: forms covalent bonds between fragments
  • 7. Potential drug targets 3 • Protein synthesis machinery - Ribosome 50S 30S (a 16S rRNA + ribosomal proteins)
  • 8. How antibiotics work Disrupt cell wall b-lactams inhibit peptidoglycan synthesis Vancomycin disrupts peptidoglycan cross-links Disrupt membranes Polymyxins detergent-like action on membrane Inhibit protein synthesis (ribosome) Inhibit DNA/RNA processes Disrupt metabolism Aminoglycosides irreversibly bind 30S proteins Tetracyclines block t-RNA binding to 30S Chloramphenicol, Macrolides, Clindamycin, Linezolid bind 50S Quinolones inhibit DNA gyrase/topoisomaerase Metronidazole metabolic product disrupts DNA Rifampicin binds DNA-dependent RNA polymerase Fusidic acid inhibits RNA transferase Sulfonamides, dapsone, trimethoprim disrupt folate synthesis
  • 9. Bactericidal v Bacteriostatic Bactericidal Bacteriostatic b-lactams Macrolides (clarithormycin etc.) Nitroimidazoles (metronidazole) Tetracyclines Rifampicin Lincosamides (Clindamycin) Aminoglycosides Fusidic acid Quinolones Chloramphenicol Polymyxins e.g. colistin ? Trimethoprim/sulfamethoxazole ? Trimethoprim/sulfamethoxazole Oxazolidinones e.g. Linezolid (in general) Glycopeptides e.g. vanco, teico Linezolid (some Streptococci) Lipopeptides e.g. Daptomycin Quinupristin/dalfpristin (in combo) Tigecycline
  • 10. Pharmacodynamics of effect 1. Concentration-dependent killing 2. Time-dependent killing – with no prolonged effect 3. Time dependent killing – with prolonged effect • Minimum Inhibitory Concentration (MIC) – Lowest [ ] that inhibits growth after 16-20 hrs incubation. • CMax = Peak antibiotic concentration • Area under the curve (AUC) – Amount of antibiotic delivered over a specific time.
  • 11. Concentration-dependent killing • Moderate to prolonged persistent effects • Goal of dosing = maximize concentrations • PK parameter determining efficacy – CMax – CMax:MIC ratio (>10 for AG’s) – AUC/MIC (>125 for FQ’s, 70 for metronidazole) • Examples – Aminoglycosides, Flouroquinolones, Colistin, Metronidazole, Ampho B.
  • 12. Time dependent killing 1 • Prolonged persistent effects • Goal of dosing = optimize amount of drug • PK parameter determining efficacy – AUC/MIC – Time above MIC • Examples – Vancomycin, tetracyclines, fluconazole.
  • 13. Time dependent killing 2 • Without prolonged effects • Goal of dosing = maximize exposure duration • PK parameter determining efficacy – Time above MIC (T>MIC) • Time above MIC >70% for b-lactams, >85% linezolid – AUC/MIC • AUC/MIC > 80 • Examples – Beta lactam, macrolides, clindamycin, flucytosine, linezolid.
  • 14. Why treatment fails • You’ve given the wrong drug at the right time! Really BAD • You’ve given the right drug at the wrong time! BAD • You’ve given too small a dose of the right drug BAD • There’s an insufficient concentration at site • The drug’s being cleared too fast BAD • They’re not infected!!! Really BAD BAD
  • 15. PK/PD alterations in critical illness • Poor tissue penetration – Microvascular shutdown – Interstitial fluid • Increased Vd - interstitial fluid volume – – – – Rapid fluid boluses Pleural effusions Ascites Hypoalbuminaemia • Increased clearance – Severe hyperdynamic circulation • Young polytrauma and sepsis – renal hyperfiltration – Severe burns – Leukaemia
  • 16. Optimising use • Shock & Awe!!! – Aggressive dosing up-front • Short, sharp courses • De-escalation – Of dose, based on response and PK/PD – Of drug, based on cultures & sensitivity • Antibiotic cycling • PK/PD modelling • Dose strategies – prolonged or continuous infusion
  • 18. COCCI • Staphylococci • Streptococci • Enterococci BACILLI • • • • OTHER Gram positives • Yeasts Corynebacterium spp (diphtheroids) Clostridium Listeria Bacillus spp
  • 19. BACILLI • • • • • • • H. influenzae B. pertussis Brucella spp Francisella spp Legionella spp Vibrio spp Pseudomonas spp Proteus spp Campylobacter spp Yersinia spp Shigella spp Salmonella spp COCCI • • • • • • N. meningitidis • N. gonorrhoeae BACILLI COCCO-BACILLI Gram negatives • • • • • Klebsiella spp E. coli Enterobacter Citrobacter Serratia Fermenters
  • 20. Mob-rule • Quorum sensing – Signals between bacteria – Same or different spp • Effects – Inhibition of growth (some species) – Increased virulence e.g. Pseudomonas
  • 22. Antimicrobial resistance Antibiotic Mechanism of resistance Chloramphenicol Reduced uptake into cell Tetracycline Active efflux from the cell β-lactams, Erythromycin, Lincomycin Eliminates or reduces binding of antibiotic to cell target β-lactams, Aminoglycosides, Chloramphenicol Enzymatic cleavage or modification to inactivate antibiotic molecule Sulfonamides, Trimethoprim Metabolic bypass of inhibited reaction Sulfonamides, Trimethoprim Overproduction of antibiotic target (titration)
  • 23. Transmission of resistance DNA TRANSFER from dead organisms PLASMIDS + MUTATION VIRAL TRANSFER (PHAGE)