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Linux Cluster and Distributed Resource Manager

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Hong ChangBum
Hong ChangBum

Linux Cluster and Distributed Resource Manager using Shell Script

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Linux Cluster and Distributed Resource Manager Center for Genome Science, NIH, KCDC Hong Chang Bum hongiiv@gmail.com
Linux Cluster • 3 Linux Cluster Machine • KHAN • KGENE • BIO
KHAN • Total 94 Nodes (1 Master + 94 work Node) • 64Bit PowerPC 720 4-way, 16GB RAM • 64Bit PowerPC 770 2-way, 2GB RAM • User Space: /home1 1.6TB • Scratch Space: /home2/scratch 935GB • Software: /home1/biosoftware • EIGNSTRAT, merlin, phase, plink, R ...
DRM • Distribute Resource Manager • Job Scheduler • IBM LoadLeveler, PBS, OpenPBS, Torqueue, Grid Engine, Sun Grid Engine(SGE), LSF • Job Distribute, Job Status, Queue status, Node Status, User Accounting
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager
Linux Cluster and Distributed Resource Manager

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Linux Cluster and Distributed Resource Manager

  • 1. Linux Cluster and Distributed Resource Manager Center for Genome Science, NIH, KCDC Hong Chang Bum hongiiv@gmail.com
  • 2. Linux Cluster • 3 Linux Cluster Machine • KHAN • KGENE • BIO
  • 3. KHAN • Total 94 Nodes (1 Master + 94 work Node) • 64Bit PowerPC 720 4-way, 16GB RAM • 64Bit PowerPC 770 2-way, 2GB RAM • User Space: /home1 1.6TB • Scratch Space: /home2/scratch 935GB • Software: /home1/biosoftware • EIGNSTRAT, merlin, phase, plink, R ...
  • 4. DRM • Distribute Resource Manager • Job Scheduler • IBM LoadLeveler, PBS, OpenPBS, Torqueue, Grid Engine, Sun Grid Engine(SGE), LSF • Job Distribute, Job Status, Queue status, Node Status, User Accounting