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LIMS 
B.S(HONS)BOTANY 
3RD SEMESTER (M) 
MARIA ALEEM (1001) 
UNIVERSITY OF EDUCATION OKARA CAMPUS 
University of Education Okara 
Campus 
1
TABLE OF CONTENTS 
• Introduction 
• History 
• Operations 
• Sample management 
• Electronic data exchange 
• Conclusions 
University of Education Okara 
Campus 
2
Introduction: 
• A Laboratory Information Management 
System (LIMS), sometimes referred to as a Laboratory 
Information System (LIS) or Laboratory Management 
System (LMS), is a software-based laboratory and 
information management system that offers a set of 
key features that support a modern laboratory's 
operations. The definition of a LIMS is somewhat 
controversial: LIMSs are dynamic because the modern 
laboratory's requirements are rapidly evolving and 
needs often vary significantly from lab to lab. 
Therefore, a working definition of a LIMS ultimately 
depends on the interpretation by the individuals or 
groups involved. 
University of Education Okara 
Campus 
3
History: 
• Up until the late 1970s, the management of 
laboratory samples and the associated analysis 
and reporting were time-consuming manual 
processes often riddled with transcription errors. 
This gave some organizations impetus to 
streamline the collection of data and how it was 
reported. Custom in-house solutions were 
developed by a few individual laboratories, while 
some enterprising entities at the same time 
sought to develop a more commercial reporting 
solution in the form of special instrument-based 
systems. 
University of Education Okara 
Campus 
4
History: 
• In 1982 the first generation of LIMS was introduced in the 
form of a single centralized minicomputer, which offered 
laboratories the first opportunity to utilize automated 
reporting tools. As the interest in these early LIMS grew, 
industry leaders like Geist Gibbon of the Federal Energy 
Technology Centre in Pittsburgh began planting the seeds 
through LIMS-related conferences. By 1988 the second-generation 
commercial offerings were tapping databases 
into relational to expand LIMS into more application-specific 
territory, and International LIMS Conferences were in full 
swing. As personal computers became more powerful and 
prominent, a third generation of LIMS emerged in the early 
1990s. As of 2012, some LIMS have added additional 
characteristics that continue to shape how a LIMS is defined. 
Examples include the addition of clinical functionality, (ELN) 
functionality, as well a rise in the (SaaS) distribution model. 
University of Education Okara 
Campus 
5
Operations: 
• The LIMS is an evolving concept, with new features and 
functionality being added often. As laboratory demands change 
and technological progress continues, the functions of a LIMS will 
likely also change. Despite these changes, a LIMS tends to have a 
base set of functionality that defines it. That functionality can 
roughly be divided into five laboratory processing phases, with 
numerous software functions falling under each the reception and 
log in of a sample and its associated customer data 
• the assignment, scheduling, and tracking of the sample and the 
associated analytical workload 
• the processing and quality control associated with the sample and 
the utilized equipment and inventory 
• the storage of data associated with the sample analysis 
• the inspection, approval, and compilation of the sample data for 
reporting and/or further analysis 
University of Education Okara 
Campus 
6
Sample management: 
• The core function of LIMS has traditionally been the 
management of samples. This typically is initiated when a 
sample is received in the laboratory, at which point the 
sample will be registered in the LIMS. Some LIMS will allow 
the customer to place an "order" for a sample directly to the 
LIMS at which point the sample is generated in an 
"unreceived" state. The processing could then include a step 
where the sample container is registered and sent to the 
customer for the sample to be taken and then returned to 
the lab.. The LIMS then tracks chain of custody as well as 
sample location. Location tracking usually involves assigning 
the sample to a particular freezer location, often down to 
the granular level of shelf, rack, box, row, and column. Other 
event tracking such as freeze and thaw cycles that a sample 
undergoes in the laboratory may be required. 
University of Education Okara 
Campus 
7
Electronic data exchange 
• The exponentially growing volume of data created in 
laboratories, coupled with increased business demands and 
focus on profitability, have pushed LIMS vendors to increase 
attention to how their LIMS handles electronic data 
exchanges. Attention must be paid to how an instrument's 
input and output data is managed, how remote sample 
collection data is imported and exported, and how mobile 
technology integrates with the LIMS. The successful transfer 
of data files in Microsoft Excel and other formats, as well as 
the import and export of data to Oracle, SQL, and Microsoft 
Access databases is a pivotal aspect of the modern LIMS. In 
fact, the transition "from proprietary databases to 
standardized database management systems such as Oracle 
and SQL" has arguably had one of the biggest impacts on 
how data is managed and exchanged in laboratories. 
University of Education Okara 
Campus 
8
Standards: 
• A LIMS covers standards such as: 
• 21 CFR Part 11 from the Food and Drug Administration 
• ISO/IEC 17025 
• ISO 15189 
• Good Laboratory Practice 
University of Education Okara 
Campus 
9
Conclusions: 
• LIMS (Laboratory Information 
Management Software) is very helpful. It 
gives a lot of information related to many 
aspects it is a compendium of 
information on state of the art data 
management and different fields. It also 
give electronic data exchange and it has 
many standards. 
University of Education Okara 
Campus 
10

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LIMS Guide for Sample Management and Data Exchange

  • 1. LIMS B.S(HONS)BOTANY 3RD SEMESTER (M) MARIA ALEEM (1001) UNIVERSITY OF EDUCATION OKARA CAMPUS University of Education Okara Campus 1
  • 2. TABLE OF CONTENTS • Introduction • History • Operations • Sample management • Electronic data exchange • Conclusions University of Education Okara Campus 2
  • 3. Introduction: • A Laboratory Information Management System (LIMS), sometimes referred to as a Laboratory Information System (LIS) or Laboratory Management System (LMS), is a software-based laboratory and information management system that offers a set of key features that support a modern laboratory's operations. The definition of a LIMS is somewhat controversial: LIMSs are dynamic because the modern laboratory's requirements are rapidly evolving and needs often vary significantly from lab to lab. Therefore, a working definition of a LIMS ultimately depends on the interpretation by the individuals or groups involved. University of Education Okara Campus 3
  • 4. History: • Up until the late 1970s, the management of laboratory samples and the associated analysis and reporting were time-consuming manual processes often riddled with transcription errors. This gave some organizations impetus to streamline the collection of data and how it was reported. Custom in-house solutions were developed by a few individual laboratories, while some enterprising entities at the same time sought to develop a more commercial reporting solution in the form of special instrument-based systems. University of Education Okara Campus 4
  • 5. History: • In 1982 the first generation of LIMS was introduced in the form of a single centralized minicomputer, which offered laboratories the first opportunity to utilize automated reporting tools. As the interest in these early LIMS grew, industry leaders like Geist Gibbon of the Federal Energy Technology Centre in Pittsburgh began planting the seeds through LIMS-related conferences. By 1988 the second-generation commercial offerings were tapping databases into relational to expand LIMS into more application-specific territory, and International LIMS Conferences were in full swing. As personal computers became more powerful and prominent, a third generation of LIMS emerged in the early 1990s. As of 2012, some LIMS have added additional characteristics that continue to shape how a LIMS is defined. Examples include the addition of clinical functionality, (ELN) functionality, as well a rise in the (SaaS) distribution model. University of Education Okara Campus 5
  • 6. Operations: • The LIMS is an evolving concept, with new features and functionality being added often. As laboratory demands change and technological progress continues, the functions of a LIMS will likely also change. Despite these changes, a LIMS tends to have a base set of functionality that defines it. That functionality can roughly be divided into five laboratory processing phases, with numerous software functions falling under each the reception and log in of a sample and its associated customer data • the assignment, scheduling, and tracking of the sample and the associated analytical workload • the processing and quality control associated with the sample and the utilized equipment and inventory • the storage of data associated with the sample analysis • the inspection, approval, and compilation of the sample data for reporting and/or further analysis University of Education Okara Campus 6
  • 7. Sample management: • The core function of LIMS has traditionally been the management of samples. This typically is initiated when a sample is received in the laboratory, at which point the sample will be registered in the LIMS. Some LIMS will allow the customer to place an "order" for a sample directly to the LIMS at which point the sample is generated in an "unreceived" state. The processing could then include a step where the sample container is registered and sent to the customer for the sample to be taken and then returned to the lab.. The LIMS then tracks chain of custody as well as sample location. Location tracking usually involves assigning the sample to a particular freezer location, often down to the granular level of shelf, rack, box, row, and column. Other event tracking such as freeze and thaw cycles that a sample undergoes in the laboratory may be required. University of Education Okara Campus 7
  • 8. Electronic data exchange • The exponentially growing volume of data created in laboratories, coupled with increased business demands and focus on profitability, have pushed LIMS vendors to increase attention to how their LIMS handles electronic data exchanges. Attention must be paid to how an instrument's input and output data is managed, how remote sample collection data is imported and exported, and how mobile technology integrates with the LIMS. The successful transfer of data files in Microsoft Excel and other formats, as well as the import and export of data to Oracle, SQL, and Microsoft Access databases is a pivotal aspect of the modern LIMS. In fact, the transition "from proprietary databases to standardized database management systems such as Oracle and SQL" has arguably had one of the biggest impacts on how data is managed and exchanged in laboratories. University of Education Okara Campus 8
  • 9. Standards: • A LIMS covers standards such as: • 21 CFR Part 11 from the Food and Drug Administration • ISO/IEC 17025 • ISO 15189 • Good Laboratory Practice University of Education Okara Campus 9
  • 10. Conclusions: • LIMS (Laboratory Information Management Software) is very helpful. It gives a lot of information related to many aspects it is a compendium of information on state of the art data management and different fields. It also give electronic data exchange and it has many standards. University of Education Okara Campus 10