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Web of Science
                       Joost Daams, MA
                        Arnold Leenders
                     Ingeborg Nagel, MSc




Medical Library
Programme

• Introduction to Citation Analysis and
  Web of Science

• Web of Science (WoS)
   – Searching for articles
   – Cited reference search
   – Analyzing results



• Hirsch-index (H-index)

• Journal Citation Reports (JCR): impact factors

     Medical Library
Introduction: What is a citation index?

 • A citation index is an index of citations between
    publications, allowing the user to easily establish which
    later documents cite which earlier documents1.
• First citation index was the Science Citation Index,
   established in 1960 by the Institute for Scientific
   Information (ISI). Later followed by the Social Sciences
   Citation Index and the Arts and Humanitites Citation Index.
• Examples of citation indexes: Web of Science, Scopus,
  CiteSeer, Google Scholar.

    1
     "Citation index," in Wikipedia; available from http://en.wikipedia.org/wiki/Citation_index


        Medical Library
Time


  Cited articles                                            Citing articles



         1950                                                      2010

                                   original work
2000                2002                                  2007                2012



          1997                            2006                      2008




                                         1962
                            2007

                                                   2012

         Related articles   1998
                                          2001


       Medical Library
Introduction: citation analysis


Use citation analysis to find:
• Who has cited your work
• Most cited articles on your research topic
• Leading researchers, institutions and journals in your
  field of research




     Medical Library
Introduction: Web of Science content (1)

• Combination of 3 citation databases:
   – Science Citation Index
   – Social Sciences Citation Index
   – Arts & Humanities Citation Index

• Over 12,000 journals and 120,000 conference
  proceedings indexed, coverage to 1975.

• Citation analysis tool



      Medical Library
Introduction: Web of Science content (2)




•   Multidisciplinary          • Medicine and
•   12000 journals               related fields
•   No controlled vocabulary   • 5400 journals
•   Conference proceedings     • MeSH terms
•   Citation analysis          • Clinical filters




     Medical Library
Introduction: recap

  • Citation analysis

  • Web of Science: content




Medical Library
WoS: Searching for articles (1)

• Combine search terms using operators:
   – AND, OR, NOT
   – NEAR/x (x = number of words that separate terms)
   – SAME (terms in same field, can only be used in
     Address field)

• Topic field = Title, Abstract, Author Keywords

• Combine search sets on the Search History page


     Medical Library
WoS: Searching for articles (2)
• Phrase search: "kidney transplant"

• Both right- and left-hand truncation:
   – transplant* finds transplant, transplants,
     transplantation
   – *saccharide finds disaccharide, polysaccharide, etc.

• Lemmatization (on/off) includes synonyms, plurals, and
  singulars in the search results. Does not apply for terms
  enclosed in quotation marks (" ").



     Medical Library
WoS: Searching for articles (3)

• Find articles on Fabry disease
• Sort articles by time cited
• Which article has been cited most and how many times
  was this article cited?




     Medical Library
WoS: Searching for articles (4)

Assignment 1.
Searching for articles on a topic
Go to the Web of Science database and search for articles on the topic
   delirium in patients with hip fracture.

Sort the results by "Times Cited – highest to lowest".
a. Which article has been cited most and how many articles have cited this
   article?
b. Click on the Times Cited number to view all articles that cited the selected
   article. What is the title of the most recent articles that cited it?




   Medical Library
Cited reference search (1)




Medical Library
Cited reference search (2)

Assignment 2.
Cited reference search

Go to the Cited Reference Search tab in Web of Science and search for the
   following article, using the predefined fields Cited Author, Cited Work and
   Cited Year.




a. How many additional citing articles do you find for this article by using the
   Cited Reference Search option?
b. Why were these articles not recognized as being citing articles by the Web
   of Science?




  Medical Library
Additional: create a citation alert




    When you create a citation alert, you are
    notified by e-mail whenever the document
    has been cited by a new publication.

    The alert is active for one year. You may
    renew the alert at any time.
WoS: Analyzing results (1)

• Who is the leading author or institution in your field of
  research?
• In which journal should you publish?
• How has research on a topic developed over time?

• Analyze references by:
o Author
o Organization
o Country
o Journal title
o Publication year


     Medical Library
WoS: Analyzing results (2)




             A Citation Map shows the citation
             relationships (cited references and
             citing articles) between a selected
             paper and other papers.

Medical Library
WoS: Analyzing results (3)




Medical Library
WoS: Analyzing results (4)


Assignment 3.
Analyzing results
Go to the Search History tab in Web of Science to return to the results from exercise
   1. Analyze the results to find:

a. Which author had published most articles on delirium after hip fracture.
b. Which journal (Source Title) has published most articles on this topic.
c. Which country is leading in this field of research.




     Medical Library
H-index (1)


A scientist has index h if h of his/her Np
papers have at least h citations each, and
the other (Np − h) papers have no more
than h citations each.

(Hirsch JE: An index to quantify an individual's scientific research output. Proc
Natl Acad Sci U S A 2005;102:16569-16572.)




Medical Library
Web of Science: recap

  • Searching for articles

  • Cited reference search
 • Analyzing results



Medical Library
H-index (2)

The h-index (Hirsch-index) is an index that attempts
to measure both the productivity and impact of the
published work of a scientist or scholar.

The index is based on the set of the scientist's most
cited papers and the number of citations that they
have received in other publications

In the AMC the h-index is one of the factors used for
the scientific evaluation of the Principal Investigators


   Medical Library
a: n publications
                              c: n citations
                              h: h-index




c




            h



                      h




                          a
    Medical Library
H-index : 4




    10




c




    5
                     h



                               h



         0                         5       10    15
                                       a
             Medical Library
h-index : 4

                                                h-index : 4


    10




c




    5
                     h



                               h



         0                         5       10    15
                                       a
             Medical Library
H-index (3)



Important:
Articles n a>h are of no interest for calculating
the h-index!




   Medical Library
H-index (4)

How to calculate the h-index:

• In the AMC: use the Web of Science

• Two ways to calculate
   – Author search
   – Search option using the author index




     Medical Library
Calculate the hirsch-index of
mrs. A.H. Teeuw
General paediatrician
Emmakinderziekenhuis
Amsterdam




 Medical Library
H-index (5)
Problems:

• Spelling of the author's name differs (initials)

• Different authors have the same name

• Unknown where the author has worked (even for the
  author)

• Faulty citations


     Medical Library
H-index (6)


Assignment 4.
Calculate the Hirsch-Index of the scientists:

a. Tabbers M; paediatric gastroenterologist AMC
b. Your promotor




   Medical Library
JCR – Impact Factors (1)

• What it is …
   JIF2011 = A/B
   A = the number of times articles published in 2009 and 2010 were cited 
   by indexed journals during 2011.
   B = the total number of "citable items" published by that journal in 2009 
   and 2010. ("Citable items" are usually articles, reviews, proceedings, or 
   notes; not editorials or Letters-to-the-Editor.)



• Application
         evaluate research performance
         job promotion
         make decisions on funding
         evaluate journal collections
         determine publication strategy




 Medical Library
H-index: recap

  • What it’s for

  • What it is
 • How to calculate



Medical Library
JCR – Impact Factors (2)
• Critique
         Temporality bias
         Geographical/language bias
         Topicality bias
         Incentive for self-citations
         Range of provided subject topics
         Assignment of journals to topics
         Poor adaptation of web downloads / web citations
         Non-transparent journal inclusion criteria by 
         Thomson Reuters
         Monolithic organisation

•  Strengths
         “ Impact factor is not a perfect tool to measure the quality of articles but there is nothing
           better and it has the advantage of already being in existence and is, therefore, a good 
           technique for scientific evaluation.
           (…) The use of impact factor as a measure of quality is widespread because it fits well with
           the opinion we have in each field of the best journals in our speciality.”

           (Hoeffel C. Journal Impact factors. Allergy. 1998;53;1225)




 Medical Library
JCR – Impact Factors (3)
Some JIF-derivatives (relevant for 
determining publication strategy):

• “Journal Ranking” and “Quartile in Category”

• Aggregate Impact Factor


• Median Impact Factor

• Immediacy Index




  Medical Library
JCR – Impact Factors (5)
Assignment 5.

1. What is the 2011 impact factor of The Lancet?


2. Let’s pretend you’re about to send your manuscript to one of the top-
    ranked IF journals in your discipline (≈ category). One of your colleagues 
    suggests the Journal of NeuroEngineering and Rehabilitation
a. What is the 2011 impact factor of this journal?
b. Describe in plain language what your answer under 2a expresses
c. Explain why your decision to send your manuscript to this journal could 
   depend on whether you are a neuroscientist or a physiotherapist. Hint: 
   take into account the journal’s category score. 


3. What is the 2009 impact factor of Aids Care?


4.Does the official IF address self cites?

   Medical Library
JCR – Impact Factors: recap
H – Index & JIF quizz: True or False?
                                                            H-Index   JIF

Describes journal impact


Describes author impact


Based on fixed source data

Is adjusted for publication type
(i.e. letter to the editor versus systematic review etc.)

Is adjusted for self citation
(resp. of own publications and own journal)

Allows for interdisciplinairy benchmarking




  Medical Library
Do you have any questions?




Medical Library

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Web of Science: Citation Analysis and Impact Factors

  • 1. Web of Science Joost Daams, MA Arnold Leenders Ingeborg Nagel, MSc Medical Library
  • 2. Programme • Introduction to Citation Analysis and Web of Science • Web of Science (WoS) – Searching for articles – Cited reference search – Analyzing results • Hirsch-index (H-index) • Journal Citation Reports (JCR): impact factors Medical Library
  • 3. Introduction: What is a citation index? • A citation index is an index of citations between publications, allowing the user to easily establish which later documents cite which earlier documents1. • First citation index was the Science Citation Index, established in 1960 by the Institute for Scientific Information (ISI). Later followed by the Social Sciences Citation Index and the Arts and Humanitites Citation Index. • Examples of citation indexes: Web of Science, Scopus, CiteSeer, Google Scholar. 1 "Citation index," in Wikipedia; available from http://en.wikipedia.org/wiki/Citation_index Medical Library
  • 4. Time Cited articles Citing articles 1950 2010 original work 2000 2002 2007 2012 1997 2006 2008 1962 2007 2012 Related articles 1998 2001 Medical Library
  • 5. Introduction: citation analysis Use citation analysis to find: • Who has cited your work • Most cited articles on your research topic • Leading researchers, institutions and journals in your field of research Medical Library
  • 6. Introduction: Web of Science content (1) • Combination of 3 citation databases: – Science Citation Index – Social Sciences Citation Index – Arts & Humanities Citation Index • Over 12,000 journals and 120,000 conference proceedings indexed, coverage to 1975. • Citation analysis tool Medical Library
  • 7. Introduction: Web of Science content (2) • Multidisciplinary • Medicine and • 12000 journals related fields • No controlled vocabulary • 5400 journals • Conference proceedings • MeSH terms • Citation analysis • Clinical filters Medical Library
  • 8. Introduction: recap • Citation analysis • Web of Science: content Medical Library
  • 9. WoS: Searching for articles (1) • Combine search terms using operators: – AND, OR, NOT – NEAR/x (x = number of words that separate terms) – SAME (terms in same field, can only be used in Address field) • Topic field = Title, Abstract, Author Keywords • Combine search sets on the Search History page Medical Library
  • 10. WoS: Searching for articles (2) • Phrase search: "kidney transplant" • Both right- and left-hand truncation: – transplant* finds transplant, transplants, transplantation – *saccharide finds disaccharide, polysaccharide, etc. • Lemmatization (on/off) includes synonyms, plurals, and singulars in the search results. Does not apply for terms enclosed in quotation marks (" "). Medical Library
  • 11. WoS: Searching for articles (3) • Find articles on Fabry disease • Sort articles by time cited • Which article has been cited most and how many times was this article cited? Medical Library
  • 12. WoS: Searching for articles (4) Assignment 1. Searching for articles on a topic Go to the Web of Science database and search for articles on the topic delirium in patients with hip fracture. Sort the results by "Times Cited – highest to lowest". a. Which article has been cited most and how many articles have cited this article? b. Click on the Times Cited number to view all articles that cited the selected article. What is the title of the most recent articles that cited it? Medical Library
  • 13. Cited reference search (1) Medical Library
  • 14. Cited reference search (2) Assignment 2. Cited reference search Go to the Cited Reference Search tab in Web of Science and search for the following article, using the predefined fields Cited Author, Cited Work and Cited Year. a. How many additional citing articles do you find for this article by using the Cited Reference Search option? b. Why were these articles not recognized as being citing articles by the Web of Science? Medical Library
  • 15. Additional: create a citation alert When you create a citation alert, you are notified by e-mail whenever the document has been cited by a new publication. The alert is active for one year. You may renew the alert at any time.
  • 16. WoS: Analyzing results (1) • Who is the leading author or institution in your field of research? • In which journal should you publish? • How has research on a topic developed over time? • Analyze references by: o Author o Organization o Country o Journal title o Publication year Medical Library
  • 17. WoS: Analyzing results (2) A Citation Map shows the citation relationships (cited references and citing articles) between a selected paper and other papers. Medical Library
  • 18. WoS: Analyzing results (3) Medical Library
  • 19. WoS: Analyzing results (4) Assignment 3. Analyzing results Go to the Search History tab in Web of Science to return to the results from exercise 1. Analyze the results to find: a. Which author had published most articles on delirium after hip fracture. b. Which journal (Source Title) has published most articles on this topic. c. Which country is leading in this field of research. Medical Library
  • 20. H-index (1) A scientist has index h if h of his/her Np papers have at least h citations each, and the other (Np − h) papers have no more than h citations each. (Hirsch JE: An index to quantify an individual's scientific research output. Proc Natl Acad Sci U S A 2005;102:16569-16572.) Medical Library
  • 21. Web of Science: recap • Searching for articles • Cited reference search • Analyzing results Medical Library
  • 22. H-index (2) The h-index (Hirsch-index) is an index that attempts to measure both the productivity and impact of the published work of a scientist or scholar. The index is based on the set of the scientist's most cited papers and the number of citations that they have received in other publications In the AMC the h-index is one of the factors used for the scientific evaluation of the Principal Investigators Medical Library
  • 23. a: n publications c: n citations h: h-index c h h a Medical Library
  • 24. H-index : 4 10 c 5 h h 0 5 10 15 a Medical Library
  • 25. h-index : 4 h-index : 4 10 c 5 h h 0 5 10 15 a Medical Library
  • 26. H-index (3) Important: Articles n a>h are of no interest for calculating the h-index! Medical Library
  • 27. H-index (4) How to calculate the h-index: • In the AMC: use the Web of Science • Two ways to calculate – Author search – Search option using the author index Medical Library
  • 28. Calculate the hirsch-index of mrs. A.H. Teeuw General paediatrician Emmakinderziekenhuis Amsterdam Medical Library
  • 29. H-index (5) Problems: • Spelling of the author's name differs (initials) • Different authors have the same name • Unknown where the author has worked (even for the author) • Faulty citations Medical Library
  • 30. H-index (6) Assignment 4. Calculate the Hirsch-Index of the scientists: a. Tabbers M; paediatric gastroenterologist AMC b. Your promotor Medical Library
  • 31. JCR – Impact Factors (1) • What it is … JIF2011 = A/B A = the number of times articles published in 2009 and 2010 were cited  by indexed journals during 2011. B = the total number of "citable items" published by that journal in 2009  and 2010. ("Citable items" are usually articles, reviews, proceedings, or  notes; not editorials or Letters-to-the-Editor.) • Application evaluate research performance job promotion make decisions on funding evaluate journal collections determine publication strategy Medical Library
  • 32. H-index: recap • What it’s for • What it is • How to calculate Medical Library
  • 33. JCR – Impact Factors (2) • Critique Temporality bias Geographical/language bias Topicality bias Incentive for self-citations Range of provided subject topics Assignment of journals to topics Poor adaptation of web downloads / web citations Non-transparent journal inclusion criteria by  Thomson Reuters Monolithic organisation •  Strengths “ Impact factor is not a perfect tool to measure the quality of articles but there is nothing   better and it has the advantage of already being in existence and is, therefore, a good    technique for scientific evaluation.   (…) The use of impact factor as a measure of quality is widespread because it fits well with   the opinion we have in each field of the best journals in our speciality.”   (Hoeffel C. Journal Impact factors. Allergy. 1998;53;1225) Medical Library
  • 34. JCR – Impact Factors (3) Some JIF-derivatives (relevant for  determining publication strategy): • “Journal Ranking” and “Quartile in Category” • Aggregate Impact Factor • Median Impact Factor • Immediacy Index Medical Library
  • 35. JCR – Impact Factors (5) Assignment 5. 1. What is the 2011 impact factor of The Lancet? 2. Let’s pretend you’re about to send your manuscript to one of the top- ranked IF journals in your discipline (≈ category). One of your colleagues  suggests the Journal of NeuroEngineering and Rehabilitation a. What is the 2011 impact factor of this journal? b. Describe in plain language what your answer under 2a expresses c. Explain why your decision to send your manuscript to this journal could  depend on whether you are a neuroscientist or a physiotherapist. Hint:  take into account the journal’s category score.  3. What is the 2009 impact factor of Aids Care? 4.Does the official IF address self cites? Medical Library
  • 36. JCR – Impact Factors: recap H – Index & JIF quizz: True or False? H-Index JIF Describes journal impact Describes author impact Based on fixed source data Is adjusted for publication type (i.e. letter to the editor versus systematic review etc.) Is adjusted for self citation (resp. of own publications and own journal) Allows for interdisciplinairy benchmarking Medical Library

Notes de l'éditeur

  1. The journal Impact Factor is the average number of times articles from the journal published in the past two years have been cited in the JCR year.
  2. The aggregate Impact Factor for a subject category is calculated the same way as the Impact Factor for a journal, but it takes into account the number of citations to all journals in the category and the number of articles from all journals in the category. An aggregate Impact Factor of 1.0 means that that,  on average , the articles in the subject category published one or two years ago have been cited one time. The  median Impact Factor  is the median value of all journal Impact Factors in the subject category. The Impact Factor mitigates the importance of absolute citation frequencies. It tends to discount the advantage of large journals over small journals because large journals produce a larger body of citable literature. For the same reason, it tends to discount the advantage of frequently issued journals over less frequently issued ones and of older journals over newer ones. Because the journal impact factor offsets the advantages of size and age, it is a valuable tool for journal evaluation. The Immediacy Index is the average number of times an article is cited in the year it is published. The  journal Immediacy Index  indicates how quickly articles in a journal are cited.The  aggregate Immediacy Index  indicates how quickly articles in a subject category are cited. The Immediacy Index is calculated by dividing the number of citations to articles published in a given year by the number of articles published in that year.Because it is a per-article average, the Immediacy Index tends to discount the advantage of large journals over small ones. However, frequently issued journals may have an advantage because an article published early in the year has a better chance of being cited than one published later in the year. Many publications that publish infrequently or late in the year have low Immediacy Indexes.For comparing journals specializing in cutting-edge research, the immediacy index can provide a useful perspective.
  3. 1,684 [problemen: ander jaar dan standaard jaar, ander JCR segment dan Science, problemen met de ondertitel waardoor aids care ongetrunceerd bij title words bijv. niet wordt gevonden] 2a. 3,264 [let op: JCR science edition!] 2b. On average 3,264 times articles from “Journal of NeuroEngineering and Rehabilitation” published in the past two years have been cited in 2011. 2c. Two ways: - journal ranking -> quartile score - subject categories -> select and compare both relevant subject categories: “view category data”. Compare for instance the median impact factors in relation to the journal’s IF. 3. No – this figure is provided in the section “Journal Self Cites” of the journal record in JCR.