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INDUSTRIAL FERMENTATION BIOTECHNOLOGY
Dr.Kalaiselvigovindan
Animal Biotechnology
TANUVAS, INDIA
Fermentation technology
• Food safety is a global issue
• Soil microbes can spoil food
• Contamination by unsanitary handl...
Bread Production
• Sourdough culture- yeast Candida milleri and
Lactobacillus sanfrancisco 1:100 ratio
• German sour rye b...
GRAINS
• Rye and wheat are harvested dry
• If they get wet, molds and other microbes will grow
• Insect, birds and rodent ...
FRUITS AND VEGETABLES
• Pseudomonas fluorescens are found on surface of
fruits and vegetables
• Pathogens: Salmonella, Shi...
MEATS AND POULTRY
• 70 different types pathogens found at
slaughterhouses, inspected by vet
• Dec 2003 -1st
case of Mad Co...
FISH AND SHELLFISH
• Fresh fish have microbes: enteric bacteria,
worms, & viruses which survive even
shipped in ice
• Shel...
MILK
• Breeding cattle for high milk production have
large udders and easily admit bacteria- get
rid of 1st
few squirts wh...
OTHER EDIBLE
SUBSTANCES
• Sugar- raw cane supports fungi: Aspergillus,
Saccharomyces, Candida. Bacteria: Bacillus
and Micr...
PREVENTING DISEASE TRANSMISSION
AND FOOD SPOILAGE
• More contamination in large processing plants
• Klebsiella found in hu...
Methods of preservation of food
• Drying of grain
• Osmotic pressure (salt or sugar)- Dried and
salted meats and other foo...
CANNING
• Some thermophiles (Bacillus
stearothermophilus) may remain alive
even after canning, spores can
germinate and gr...
Food canning
Commercial Sterilization to Destroy
C. botulinum Endospores
• 12D treatment kills 1012
endospores
• Surviving endospores o...
DRYING AND LYOPHILIZATION
• Drying- desication or dehydration is oldest
method
• Remove 90% of water
• Stops growth but do...
Food Preservation- Irradiation
• Aseptic packaging:
Pre-sterilized
materials assembled
into packages and
aseptically fille...
FOOD IRRADIATION- Ionizing Radiation
• 2 types of Irradiation- UV
and Ionizing
• Still new and controversial
• Microwaves ...
CHEMICAL ADDITIVES
• Benzoic, sorbic and propionic acids used in
margarine, juice, bread, other baked goods
• Alkylating a...
ANTIBIOTICS
• In US only nisin - bacteriocin produced by
milk fermentation by Streptococcus lactis
• Antibiotics are prohi...
PASTUERIZATION OF MILK -
STANDARDS
• 2 methods :
• High temp short time
• Low temp long time
• Ultra high temperature- UHT...
MICROORGANISMS AS FOOD
AND IN FOOD PRODUCTION
• Algae, Fungi, and Bacteria as Food:
• Yeasts are good source of protein
• ...
FOOD PRODUCTION: BREAD &
DAIRY
• BREAD- previous slide on sour dough
• Yeast Saccharomyces is a leavening agent, produce
g...
FOOD PRODUCTION: DAIRY
• Fermented Milk beverages- Mongolia- Arak drink
from Mare’s milk produces alcohol
• Acidophilus mi...
Cheese
• Curd: Solid casein from
lactic acid bacteria and
rennin
• Whey: Liquid separated
from curd
• Hard cheeses produce...
OTHER PRODUCTS
• Vinegar: ethyl alcohol by Acetobacter aceti
• Sauerkraut: cabbage with salt and microbes
Lactobacillus an...
Alcoholic Beverages-Beer, Wine
and Spirits
• Distillation-
• Beer and ale are fermented starch.
• Malting: Germinating bar...
Yeast Fermentations
Making Red Wine
Microbial Metabolism
Sugar Ethyl alcohol + CO2
Saccharomyces cerevisiae
Malic acid Lactic acid
Lactic acid bacteria
Ethyl ...
Fermentation Technology
Primary Fermentation
Secondary Fermentation
• Amino acids
• Citric acid
• Enzymes
• Vitamins
• Antibiotics :
• Penicillum
• Steroids
Industrial Microbiology/Pharmaceu...
Useful Organic Products
• Simple Organic Compounds-
• Antibiotics-1940’s penicillin, 2% are marketed, others are too
toxic...
Microbiological Mining:
Biological Leaching of Copper Ores
Alternative Energy Sources Using
Microorganisms
• Bioconversion-----methane or ethyl alcohol
Microbiological Waste Disposal
• Sewage treatment plants
• Bioremediation- use of microbes to
dispose of chemical wastes
•...
Fermentation biotechnology
Fermentation biotechnology
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Fermentation biotechnology

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Fermentation biotechnology

  1. 1. INDUSTRIAL FERMENTATION BIOTECHNOLOGY Dr.Kalaiselvigovindan Animal Biotechnology TANUVAS, INDIA
  2. 2. Fermentation technology • Food safety is a global issue • Soil microbes can spoil food • Contamination by unsanitary handling of food • Improper storage and preparation procedures can lead to contamination by pathogens • Imports of fruits and vegetables from 3rd World countries can bring in diseases and parasites • *Hands washed properly??
  3. 3. Bread Production • Sourdough culture- yeast Candida milleri and Lactobacillus sanfrancisco 1:100 ratio • German sour rye bread has 4 different yeast species and 13 species of Lactobacilli • Yeast feed on the sugars except maltose, Lactobacilli need maltose, then produce ethyl alcohol and CO2 • Lactobacilli produce lactic and acetic acids giving the sour flavor, pH 3.6 - 4.0 inhibits microbial growth
  4. 4. GRAINS • Rye and wheat are harvested dry • If they get wet, molds and other microbes will grow • Insect, birds and rodent vectors also transmit microbes • Raw grain with mold Claviceps purpurea cause ergotism, mold is halucinogenic and deadly • Aspergillus produce aflatoxins • Rhizopus nigricans is most common bread mold, also Aspergillus, Penicillium and Monila (pink mold) • Rye bread likely infected by Bacillus sp (w/spores)
  5. 5. FRUITS AND VEGETABLES • Pseudomonas fluorescens are found on surface of fruits and vegetables • Pathogens: Salmonella, Shigella, Entameoba, Ascaris can be transmitted on surfaces • Leafy vegetables more susceptible to rot by Erwinia carotovora, Penicillium mold on citrus fruits and apples • Fungus Phytophthora infestans caused potato blight • Now using GMO to make plants resistant • Tomato rot- Fusarium fungus, Rhizopus injected by insects. Peach rot - Monilia fruiticola
  6. 6. MEATS AND POULTRY • 70 different types pathogens found at slaughterhouses, inspected by vet • Dec 2003 -1st case of Mad Cow in US, stricter laws • Carcasses are hung in refrigerated rooms to age, some mold: Rhizopus and Mucor , Pseudomonas release H2S and green coloration • Clostridium cause bone stink deep in carcass • Ground meat- may have helminths-Trichinella, lactobacilli, salmonella, E.coli • Should be cooked to kill pathogens
  7. 7. FISH AND SHELLFISH • Fresh fish have microbes: enteric bacteria, worms, & viruses which survive even shipped in ice • Shellfish- oysters & clams –Salmonella and Vibrio • Clams filter feeder can pick up red tides toxins, sewage • Shrimp (breaded) have high bacterial counts • Lobster and crabs - enteric pathogens • Crabs carry Clostridium, Cryptococcus and Candida
  8. 8. MILK • Breeding cattle for high milk production have large udders and easily admit bacteria- get rid of 1st few squirts which can have 15,000 bacteria /ml • Mostly Staphylococcus, Micrococcus, Pseudomonas • Hand milking- E. coli, Acinetobacter • Diseased cattle can transmit Mycobacterium bovis Brucella, TB • Milk is Soured by Streptococcus lactis, Lactobacillus
  9. 9. OTHER EDIBLE SUBSTANCES • Sugar- raw cane supports fungi: Aspergillus, Saccharomyces, Candida. Bacteria: Bacillus and Micrococcus • Clostridium causes the bulge in cans • High sugar concentration acys as preservative • Maple trees are tapped in spring -Leuconostoc , and Enterobacter • Honey toxins for Clostridium spores-floppy baby syndrome botulism
  10. 10. PREVENTING DISEASE TRANSMISSION AND FOOD SPOILAGE • More contamination in large processing plants • Klebsiella found in human digestive tract is also a respiratory pathogen, but can cause diarrhea • TB can be transmitted from unpasteurized milk/cheese • Virus are transferred through food • Milk is ideal medium for growth of pathogens/microbes • Crucial factor to prevent spoilage and disease is cleanliness in handling, use fresh foods, refrigerate, • Process quickly and store properly
  11. 11. Methods of preservation of food • Drying of grain • Osmotic pressure (salt or sugar)- Dried and salted meats and other foods • Fermentation - milk allowed to sour was made into cheese • Canning - use of moist heat under pressure, used to preserve fruits, vegetables, meats in glass jars and metal cans. Destroys microbes, endospores, prevents spoilage
  12. 12. CANNING • Some thermophiles (Bacillus stearothermophilus) may remain alive even after canning, spores can germinate and grow, can will bulge in heat (thermophilic anaerobic spoilage) • Flat sour spoilage • Mesophilic spoilage- improper canning at room temp • Sugars
  13. 13. Food canning
  14. 14. Commercial Sterilization to Destroy C. botulinum Endospores • 12D treatment kills 1012 endospores • Surviving endospores of thermophilic anaerobes cause spoilage with gas or flat-sour spoilage
  15. 15. DRYING AND LYOPHILIZATION • Drying- desication or dehydration is oldest method • Remove 90% of water • Stops growth but does not kill microbes • Can be sun dried, heated in ovens etc • Addition of slat, sugar or chemicals also used • Lyophilization- freeze drying is used for instant coffee and dry yeast for bread making
  16. 16. Food Preservation- Irradiation • Aseptic packaging: Pre-sterilized materials assembled into packages and aseptically filled. • Gamma radiation kills bacteria, insects, and parasitic worms. • High-energy electrons
  17. 17. FOOD IRRADIATION- Ionizing Radiation • 2 types of Irradiation- UV and Ionizing • Still new and controversial • Microwaves do not kill, but the heat is microbicidal, but food must be rotated • Ionizing-Gamma Rays can penetrate and are microbicidal • Can be done, before or after packaging • Cobalt 60 gamma and Cs 137 used in Japan and Europe, FDA has declared safe in the US • USDA proposed rules for irradiation of fresh poultry.. Still a debate!
  18. 18. CHEMICAL ADDITIVES • Benzoic, sorbic and propionic acids used in margarine, juice, bread, other baked goods • Alkylating agents- ethylene oxide used on nuts/spices • Ozone used on shellfish • NaCl- salt to cure meats, dehydrates bacteria • Halogen, chloride for processing equipment • Nitrates on sausage, hot dogs • QUATS- sanitize udders, fresh vegetables, eggshell surfaces
  19. 19. ANTIBIOTICS • In US only nisin - bacteriocin produced by milk fermentation by Streptococcus lactis • Antibiotics are prohibited because: (p 790) • Antibiotic resistance
  20. 20. PASTUERIZATION OF MILK - STANDARDS • 2 methods : • High temp short time • Low temp long time • Ultra high temperature- UHT treatment • Some chemical additives • Milk and Food in US carefully regulated by FDA • Animals inspected and soon stricter methods by microscope • Quality control has many tests for purity and guarantees high quality milk to consumers
  21. 21. MICROORGANISMS AS FOOD AND IN FOOD PRODUCTION • Algae, Fungi, and Bacteria as Food: • Yeasts are good source of protein • 1 kg yeast = 100 kg protein, but human digestive tract can only handle small amounts of it • Algal cultures: Cyanobacteria- Spirulina and red algae grown in aquaculture (in Kona) • Algae- ingredient of ice cream • Yeast, algae and bacteria could increase World Food Supply!
  22. 22. FOOD PRODUCTION: BREAD & DAIRY • BREAD- previous slide on sour dough • Yeast Saccharomyces is a leavening agent, produce gas ato make bread rise and alcohol by fermentation • Alcohol and CO2 driven off during baking- holes • DAIRY- cultured buttermilk- Streptococcus cremoris is added to skim milk and allowed to ferment, also Leuconostoc sp • Sour cream- add one of above microbes to cream • Yogurt- Streptococcus and Lactobacillus added to milk
  23. 23. FOOD PRODUCTION: DAIRY • Fermented Milk beverages- Mongolia- Arak drink from Mare’s milk produces alcohol • Acidophilus milk- add Lactibacillus acidophilus • Bulgarian milk- add L. bulgaricus, makes it more acidic • Kefir- Balkan goats milk stored in goatskin bags • Koumiss- Russian drink from Mare’s milk • Streptococcus lactis, L. bulgaricus, and yeasts are responsible for lactic acid, alcohol and other products
  24. 24. Cheese • Curd: Solid casein from lactic acid bacteria and rennin • Whey: Liquid separated from curd • Hard cheeses produced by lactic acid bacteria • Semisoft cheeses ripened by Penicillium on surface
  25. 25. OTHER PRODUCTS • Vinegar: ethyl alcohol by Acetobacter aceti • Sauerkraut: cabbage with salt and microbes Lactobacillus and Leuconostoc ferment under anaerobic conditions • Pickles: add brine to cucumbers and ferment • Olives: ferment in Salt and Leuconostoc • Poi: ferment taro paste, yeast adds alcohol • Soy Sauce: soybeans, salt and Aspergillus-ferment • Soy Products: Miso, Tofu soft curd • Fermented Meats: salami, bologna, summer sausage
  26. 26. Alcoholic Beverages-Beer, Wine and Spirits • Distillation- • Beer and ale are fermented starch. • Malting: Germinating barley converts starch to maltose and glucose. • Yeast ferment sugars to ethyl alcohol + CO2
  27. 27. Yeast Fermentations
  28. 28. Making Red Wine
  29. 29. Microbial Metabolism Sugar Ethyl alcohol + CO2 Saccharomyces cerevisiae Malic acid Lactic acid Lactic acid bacteria Ethyl alcohol Acetic acid Acetobacter or Gluconobacter
  30. 30. Fermentation Technology
  31. 31. Primary Fermentation
  32. 32. Secondary Fermentation
  33. 33. • Amino acids • Citric acid • Enzymes • Vitamins • Antibiotics : • Penicillum • Steroids Industrial Microbiology/Pharmaceutical Microorganism
  34. 34. Useful Organic Products • Simple Organic Compounds- • Antibiotics-1940’s penicillin, 2% are marketed, others are too toxic, semi-synthetic antibiotics - augmentin • Enzymes-used in industrial processes • Proteolytic enzymes in coated granules are added to detergents • Enzymes in paper production-lignin digested by fungi • Amino acids-8 of 20 essential aa not synthesized by us • Need lysine, glutamic acid etc • Bioconversion-steroids, insulin, cortisone, progesterone
  35. 35. Microbiological Mining: Biological Leaching of Copper Ores
  36. 36. Alternative Energy Sources Using Microorganisms • Bioconversion-----methane or ethyl alcohol
  37. 37. Microbiological Waste Disposal • Sewage treatment plants • Bioremediation- use of microbes to dispose of chemical wastes • 3 strains of microbes can Deactivate Aroclor 1260- a toxic PCB • Others detoxify cyanide and dioxin • Use GMO microbes

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