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Tour of the Cell




AP Biology                      2007-2008
Types of cells         Prokaryote
                        bacteria cells




           Eukaryote        Eukaryote
         animal cells
AP Biology
                            plant cells
Why organelles?
    Specialized structures                                 mitochondria
            specialized functions
              cilia or flagella for locomotion
    Containers
            partition cell into compartments                chloroplast
            create different local environments
              separate pH, or concentration of materials
            distinct & incompatible functions
              lysosome & its digestive enzymes
                                                              Golgi
    Membranes as sites for chemical reactions
            unique combinations of lipids & proteins
            embedded enzymes & reaction centers
              chloroplasts & mitochondria
AP Biology
                                                             ER
Cells gotta live!
    What jobs do cells have to do?
            building proteins
              proteins control
               every cell function
            make energy
              for daily life
              for growth
            build more cells
              growth
              reproduction
              repair
AP Biology
Why study protein production?



                        proteins




                                                 cells
DNA                                    Repeat after me…
                                   DNA gets the glory, but
AP Biology   organism              Proteins do all the work!
Building Proteins
    Organelles involved
         nucleus
         ribosomes

         endoplasmic reticulum

          (ER)
         Golgi apparatus

         vesicles

                    The Protein Assembly Line
                                    Golgi
     nucleus    ribosome   ER                   vesicles
                                  apparatus
AP Biology
TO:

    nucleus              endoplasmic
                          reticulum
                                                  protein
                                                 on its way!              TO:

DNA
             RNA                       vesicle
                                                                    TO:




                                                              TO:

                                                              vesicle


                                                        TO:
ribosomes
                   protein                              finished
                                                         protein

                                  Golgi
                                apparatus
   Making Proteins
AP Biology
Putting it together…                     Making proteins
                nucleus         cell
                 nuclear pore   membrane       protein secreted

                                rough ER




                                 ribosome
                                                         vesicle




                           proteins




    smooth ER             transport                  Golgi
                            vesicle                  apparatus
AP Biology        cytoplasm
Cells gotta live!
    What jobs do cells have to do?
            make proteins
              proteins control
               every cell function   ATP
            make energy
              for daily life
              for growth
            build more cells
              growth
              reproduction
              repair
AP Biology
Cells need power!
     Making energy
          take in food & digest it
          take in oxygen (O )
                             2
          make ATP
          remove waste




                    ATP
AP Biology
1960 | 1974
   Lysosomes                             Christian de Duve
    Function
            little “stomach” of the cell
              digests macromolecules
            “clean up crew” of the cell
              cleans up broken down
               organelles
     Structure
            vesicles of digestive enzymes
                 Where
              old organelles
                go to die!
AP Biology                      only in animal cells
Lysosomal enzymes
     Lysosomal enzymes work best at pH 5
            organelle creates custom pH
            how?
               proteins in lysosomal membrane
                pump H+ ions from the cytosol
                into lysosome
            why?
               enzymes are very sensitive
                to pH
            why?
               enzymes are proteins —
                pH affects structure
            why is this an adaptation: digestive enzymes which
             function at pH different from cytosol?
               digestive enzymes won’t function well if some leak
AP Biology      into cytosol = don’t want to digest yourself!
But sometimes cells need to die…
    Lysosomes can be used to kill cells when
       they are supposed to be destroyed
            some cells have to die for proper
             development in an organism
              apoptosis
                 “auto-destruct” process
                 lysosomes break open & kill cell
              ex: tadpole tail gets re-absorbed
               when it turns into a frog
              ex: loss of webbing between your
               fingers during fetal development
              ex: self-destruct of cancerous cell
AP Biology
syndactyly
   Fetal development
6 weeks



                                   15
                                weeks




AP Biology
When things go wrong…
    Diseases of lysosomes are often fatal
        digestive enzyme not working in lysosome
        picks up biomolecules, but can’t digest one

               lysosomes fill up with undigested material
            grow larger & larger until disrupts cell &
             organ function
               lysosomal storage diseases
                   more than 40 known diseases
               example:
               Tay-Sachs disease
               build up undigested fat
AP Biology     in brain cells
From food to making Energy
     Cells must convert incoming energy to
        forms that they can use for work
          mitochondria:
            from glucose to ATP             ATP
          chloroplasts:

            from sunlight to ATP & carbohydrates
              ATP = immediate energy
              carbohydrates = stored energy



                                ATP        +
AP Biology
Mitochondria & Chloroplasts
    Important to see the similarities
            transform energy
              generate ATP                      Lynn Margulis
                                                 U of M, Amherst
         double membranes = 2 membranes
         semi-autonomous organelles

              move, change shape, divide
            internal ribosomes, DNA & enzymes




AP Biology
Membrane-bound Enzymes




         glucose + oxygen → carbon + water + energy
                            dioxide

AP Biology
             C6H12O6 +   6O2 →   6CO2 + 6H2O + ATP
Membrane-bound Enzymes




   carbon + water + energy → glucose + oxygen
   dioxide
        6CO2 + 6H2O + light → C6H12O6 + 6O2
AP Biology
                     energy
Mitochondria are everywhere!!
      animal cells        plant cells




AP Biology
Cells gotta live!
    What jobs do cells have to do?
            building proteins
              proteins control
               every cell function
            make energy
              for daily life
              for growth
            build more cells
              growth
              reproduction
              repair

AP Biology
Cytoskeleton
     Function
            structural support
               maintains shape of cell
               provides anchorage for organelles
                  protein fibers
                        microfilaments, intermediate filaments, microtubules
            motility
               cell locomotion
               cilia, flagella, etc.
            regulation
               organizes structures
                & activities of cell
AP Biology
Cytoskeleton



                   actin
                   microtubule
                   nuclei




AP Biology
Centrioles
     Cell division
          in animal cells, pair of centrioles
           organize microtubules
          guide chromosomes in mitosis




AP Biology

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26 ch05cellsoverview2007

  • 1. Tour of the Cell AP Biology 2007-2008
  • 2. Types of cells Prokaryote bacteria cells Eukaryote Eukaryote animal cells AP Biology plant cells
  • 3. Why organelles?  Specialized structures mitochondria  specialized functions  cilia or flagella for locomotion  Containers  partition cell into compartments chloroplast  create different local environments  separate pH, or concentration of materials  distinct & incompatible functions  lysosome & its digestive enzymes Golgi  Membranes as sites for chemical reactions  unique combinations of lipids & proteins  embedded enzymes & reaction centers  chloroplasts & mitochondria AP Biology ER
  • 4. Cells gotta live!  What jobs do cells have to do?  building proteins  proteins control every cell function  make energy  for daily life  for growth  build more cells  growth  reproduction  repair AP Biology
  • 5. Why study protein production? proteins cells DNA Repeat after me… DNA gets the glory, but AP Biology organism Proteins do all the work!
  • 6. Building Proteins  Organelles involved  nucleus  ribosomes  endoplasmic reticulum (ER)  Golgi apparatus  vesicles The Protein Assembly Line Golgi nucleus ribosome ER vesicles apparatus AP Biology
  • 7. TO: nucleus endoplasmic reticulum protein on its way! TO: DNA RNA vesicle TO: TO: vesicle TO: ribosomes protein finished protein Golgi apparatus Making Proteins AP Biology
  • 8. Putting it together… Making proteins nucleus cell nuclear pore membrane protein secreted rough ER ribosome vesicle proteins smooth ER transport Golgi vesicle apparatus AP Biology cytoplasm
  • 9. Cells gotta live!  What jobs do cells have to do?  make proteins  proteins control every cell function ATP  make energy  for daily life  for growth  build more cells  growth  reproduction  repair AP Biology
  • 10. Cells need power!  Making energy  take in food & digest it  take in oxygen (O ) 2  make ATP  remove waste ATP AP Biology
  • 11. 1960 | 1974 Lysosomes Christian de Duve  Function  little “stomach” of the cell  digests macromolecules  “clean up crew” of the cell  cleans up broken down organelles  Structure  vesicles of digestive enzymes Where old organelles go to die! AP Biology only in animal cells
  • 12. Lysosomal enzymes  Lysosomal enzymes work best at pH 5  organelle creates custom pH  how?  proteins in lysosomal membrane pump H+ ions from the cytosol into lysosome  why?  enzymes are very sensitive to pH  why?  enzymes are proteins — pH affects structure  why is this an adaptation: digestive enzymes which function at pH different from cytosol?  digestive enzymes won’t function well if some leak AP Biology into cytosol = don’t want to digest yourself!
  • 13. But sometimes cells need to die…  Lysosomes can be used to kill cells when they are supposed to be destroyed  some cells have to die for proper development in an organism  apoptosis  “auto-destruct” process  lysosomes break open & kill cell  ex: tadpole tail gets re-absorbed when it turns into a frog  ex: loss of webbing between your fingers during fetal development  ex: self-destruct of cancerous cell AP Biology
  • 14. syndactyly Fetal development 6 weeks 15 weeks AP Biology
  • 15. When things go wrong…  Diseases of lysosomes are often fatal  digestive enzyme not working in lysosome  picks up biomolecules, but can’t digest one  lysosomes fill up with undigested material  grow larger & larger until disrupts cell & organ function  lysosomal storage diseases  more than 40 known diseases  example: Tay-Sachs disease build up undigested fat AP Biology in brain cells
  • 16. From food to making Energy  Cells must convert incoming energy to forms that they can use for work  mitochondria: from glucose to ATP ATP  chloroplasts: from sunlight to ATP & carbohydrates  ATP = immediate energy  carbohydrates = stored energy ATP + AP Biology
  • 17. Mitochondria & Chloroplasts  Important to see the similarities  transform energy  generate ATP Lynn Margulis U of M, Amherst  double membranes = 2 membranes  semi-autonomous organelles  move, change shape, divide  internal ribosomes, DNA & enzymes AP Biology
  • 18. Membrane-bound Enzymes glucose + oxygen → carbon + water + energy dioxide AP Biology C6H12O6 + 6O2 → 6CO2 + 6H2O + ATP
  • 19. Membrane-bound Enzymes carbon + water + energy → glucose + oxygen dioxide 6CO2 + 6H2O + light → C6H12O6 + 6O2 AP Biology energy
  • 20. Mitochondria are everywhere!! animal cells plant cells AP Biology
  • 21. Cells gotta live!  What jobs do cells have to do?  building proteins  proteins control every cell function  make energy  for daily life  for growth  build more cells  growth  reproduction  repair AP Biology
  • 22. Cytoskeleton  Function  structural support  maintains shape of cell  provides anchorage for organelles  protein fibers  microfilaments, intermediate filaments, microtubules  motility  cell locomotion  cilia, flagella, etc.  regulation  organizes structures & activities of cell AP Biology
  • 23. Cytoskeleton  actin  microtubule  nuclei AP Biology
  • 24. Centrioles  Cell division  in animal cells, pair of centrioles organize microtubules  guide chromosomes in mitosis AP Biology

Notes de l'éditeur

  1. Why organelles? There are several reasons why cells evolved organelles. First, organelles can perform specialized functions. Second, membrane bound organelles can act as containers, separating parts of the cell from other parts of the cell. Third, the membranes of organelles can act as sites for chemical reactions. Organelles as specialized structures An example of the first type of organelle is cilia, these short filaments act as "paddles" to help some cells move. Organelles as Containers Nothing ever invented by man is as complex as a living cell. At any one time hundreds of incompatible chemical reactions may be occurring in a cell. If the cell contained a uniform mixture of all the chemicals it would not be able to survive. Organelles surrounded by membranes act as individual compartments for these chemical reactions. An example of the second type of organelle is the lysosome. This structure contains digestive enzymes, these enzymes if allowed to float free in the cell would kill it. Organelle membranes as sites for chemical reactions An example of the third type of organelle is the chloroplast. The molecules that conduct the light reactions of photosynthesis are found embedded in the membranes of the chloroplast.
  2. lysosomes create a space where cell can digest macromolecules safely rupturing a few lysosomes has little impact on a cell (pH of cytosol affects functionality of the lysosomal enzymes), but massive leakage from lysosomes can destroy cell why evolve digestive enzymes which function at pH so different from cytosol? digestive enzymes won’t function well if leak into cytosol = most times don’t want to digest yourself! low pH = acid environment cause oxidation (removing electrons) & promotes hydrolysis
  3. Feedback mechanism There are sensors in the cell that monitor growth. They trigger self-destruct when they sense processes. Brown spots on leaves too. Virus infected plant cell auto-destructs and even cells around it to wall off virus.