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Evolution in
Bacteria by the
use of antibiotic
Swarnaprava Behera
10MS84,
Sujeet Kumar Choudhary
10MS54
02-04-2012
Project Overview
 Bacterial evolution-
 Effect of antibiotic – it acts on three
parts of the cell
• Bacterial protein synthesis
• Nucleic acid replication
• Cell wall biosynthesis
How tetracycline acts: protein
synthesis inhibition. T-RNA to M-RNA
ribosome complex(30s).
How cells becomes resistant
 When exposed, most dies, some
survives having genetic recombination
processes.
 They reproduce & all the descendants
will have same resistance power.
 How bacteria responds to it?
1)enzymatic
inactivation (tetracycline)
2)Ribosomal protection
3)Efflux
Key terms
o E.Coli :- Gram negative, rod shaped.
• Why we choose ?
well developed(lab environment)
easily available
• Life cycle- 20 min.
o E. coli- efflux & ribosomal protection.
o Tetracycline :-subclass of polyketides
• MIC- lowest conc. Of antibiotic which
inhibits visible growth after overnight
incubation.
Tetracycline
Click to add text
Picture Courtesy - http://www.chm.bris.ac.uk/motm/tetracycline/mol.htm
Click to add text
Statement of the Problem
o Expectation :
When bacteria are exposed to harsh
condition(bacteria may die) repeatedly,
after some generation they can have
developed the capability to survive
under same situation.
Materials Required
Reagents
o Media – LB and LB Agar
Composition :
 0.5 % Peptone
 0.3 % beef extract/yeast extract
 1.5 % agar
 0.5% NaCl
Materials Required
 Reagents:
o Antibiotic – Tetracycline(1mg/ml)
o Bacteria- E. Coli
Glass and Plastic Apparatus:
 Beaker
 Conical Flask (250 ml)
 Test Tubes
 Measuring Cylinder
Materials Required
 Glass and Plastic Apparatus:
 Quartz cuvette
 Pipette (of diff. range)
Others – cotton, aluminum foil, rubber
band etc.
Electrical Equipments:
 Spectrophotometer
Materials Required
Electrical Equipments:
 Incubator (37’c,150 rpm)
 Autoclave Machine(37’ c.45 min.)
 Laminar Air Flow
Procedure
Day-1
Fresh culture of overnight grown
bacteria were taken and OD was
measured .
1 OD @ 600 nm ~ 1 X 109 CFU/ml
Bacteria were grown at 5 different
concentrations of antibiotics.
 Concentration of bacteria was kept
equal (~ 1 X 106 CFU/ml) throughout
the experiment.
Procedure
Each test tubes were duplicated.
10 Petridis plates were prepared with
LB Agar media.
Fig.1-Test tubes with media only Fig.2- Petridis plates inside Laminar Air Flow
Data set-1
Media
[NB
Media]
(ml)
Antibiotic
(Tetracycline)
(ug/ml)
Bacterial
concentration
(E.Coli)
(CFU/ml)
Sl.
No.
5 0.1 1 X 106 1
5 0.5 1 X 106 2
5 1.0 1 X 106 3
5 2.0 1 X 106 4
5 5.0 1 X 106 5
OD of the fresh culture of
Bacteria
1.44
Procedure
Day-2
Growth were observed and MIC was
determined.
MIC = 0.5 ug/ml
Fig.3- Grown culture at lowest concentration(0.1 ug/ml)
Procedure
OD was measured(0.448 &0.450) of
the grown bacteria at lowest antibiotic
concentration(0.1 ug/ml).
At lowest antibiotic concentration, the
previously grown bacteria at
0.1ug/ml(antibiotic concentration)
were grown overnight. [Named M1 and
P1].
Again the bacterial concentration was
~ 1 X 106 CFU/ml
Procedure
P1 was the name of duplicate test
tube.
 The amount of media was same for
M1 & P1
Fig.4- Grown bacteria in M1 and P1
Procedure
Day-3
Bacteria were taken from M1and P1
and OD were observed.
 Again at lowest concentration it was
grown overnight and named it M2 And
P2.
Like this the same procedure was
repeated for 5 days.(For further
generations)
Data Set-2
Bacteria
taken
from
LB Media
(ml)
Antibiotic
(ug/ml)
Bacteria
(CFU/ml)
Name Name Day Sl.No.
OD of M1 = 0.645 OD of P1 = 0.639
M1 5 0.1 1 X 106 M2 P2 3 1
OD of M2 = 0.457 OD of P2 = 0.448
M2 5 0.1 1 X 106 M3 P3 4 2
OD of M3 = 1.630 OD of P3 = 1.600
M3 5 0.1 1 X 106 M4 P4 5 3
OD of M4 = 1.604 OD of P4 = 1.590
OD of different generations
0
0.2
0.4
0.6
0.8
1
1.2
1.4
1.6
1.8
1 2 3 4 5 6 7
Absorbance
No. of days
Procedure
Bacteria were taken from M4 and OD
was measured.
Again this bacteria were grown
overnight at 5 different concentration
of antibiotic.
Data set is same as Data Set-1.
Next day growth of the bacteria were
observed.
Final observation
Fig.4 – Growth of the bacteria at higher concentration(0.5 ug/ml)
Pictorial Comparison
Growth of bacteria before
evolution
Growth of bacteria after
evolution
Fig.3 Fig.5
0.1
ug/ml
0.1
Ug/ml
0.1
ug/ml
0.1
ug/ml
0.5
ug/ml
0.5
ug/ml
Observations
Growth of bacteria at higher
concentration of antibiotic.
Increment in MIC.(From 0.5 to 1.0
ug/ml)
Bacteria has developed resistant
power.
 Increased OD.
Conclusion
 Bacteria were evolved over time.
 From observation we get the expected
result.
 Difference is due to 3 day gap.
 2nd one is for they have developed a
high resistance power.
How related to Social issues.
 Diseases are not cured.
 Bacteria getting resistant.
 Without prescription only 1 dose will
do them resistant.
 2 or 4 dose according to the Dr. can
kill the bacteria(when life time Is
known).
Super germs.
MRSA-Multidrug resistant
staphylococcus Aureus.
Limitations
Our convention 1 OD @ 600 nm ~ 1 X
109 CFU/ml is an approximate value.
 Many generation were kept for three
days.
We took only one species of bacteria.
Triplication
More Information
Related readings
• Evolutionary Biology by Douglas J.
Futuyma
• Useful Web sites
http://www.chm.bris.ac.uk/motm/tetracycline/m
ol.htm
Acknowledgement
We are sincerely thankful to Dr. Anuradha
Bhat and Dr. Annagiri Sumana for
encouraging us to do this project.
We are also thankful to Gregor P. Jose (PhD
Student) and Shudhansu Da for their kind
help in doing our experiment.
THANK YOU !
Questions ?

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Evolution in bacteria by the use of antibiotic

  • 1. Evolution in Bacteria by the use of antibiotic Swarnaprava Behera 10MS84, Sujeet Kumar Choudhary 10MS54 02-04-2012
  • 2. Project Overview  Bacterial evolution-  Effect of antibiotic – it acts on three parts of the cell • Bacterial protein synthesis • Nucleic acid replication • Cell wall biosynthesis How tetracycline acts: protein synthesis inhibition. T-RNA to M-RNA ribosome complex(30s).
  • 3. How cells becomes resistant  When exposed, most dies, some survives having genetic recombination processes.  They reproduce & all the descendants will have same resistance power.  How bacteria responds to it? 1)enzymatic inactivation (tetracycline) 2)Ribosomal protection 3)Efflux
  • 4. Key terms o E.Coli :- Gram negative, rod shaped. • Why we choose ? well developed(lab environment) easily available • Life cycle- 20 min. o E. coli- efflux & ribosomal protection. o Tetracycline :-subclass of polyketides • MIC- lowest conc. Of antibiotic which inhibits visible growth after overnight incubation.
  • 5. Tetracycline Click to add text Picture Courtesy - http://www.chm.bris.ac.uk/motm/tetracycline/mol.htm Click to add text
  • 6. Statement of the Problem o Expectation : When bacteria are exposed to harsh condition(bacteria may die) repeatedly, after some generation they can have developed the capability to survive under same situation.
  • 7.
  • 8. Materials Required Reagents o Media – LB and LB Agar Composition :  0.5 % Peptone  0.3 % beef extract/yeast extract  1.5 % agar  0.5% NaCl
  • 9. Materials Required  Reagents: o Antibiotic – Tetracycline(1mg/ml) o Bacteria- E. Coli Glass and Plastic Apparatus:  Beaker  Conical Flask (250 ml)  Test Tubes  Measuring Cylinder
  • 10. Materials Required  Glass and Plastic Apparatus:  Quartz cuvette  Pipette (of diff. range) Others – cotton, aluminum foil, rubber band etc. Electrical Equipments:  Spectrophotometer
  • 11. Materials Required Electrical Equipments:  Incubator (37’c,150 rpm)  Autoclave Machine(37’ c.45 min.)  Laminar Air Flow
  • 12. Procedure Day-1 Fresh culture of overnight grown bacteria were taken and OD was measured . 1 OD @ 600 nm ~ 1 X 109 CFU/ml Bacteria were grown at 5 different concentrations of antibiotics.  Concentration of bacteria was kept equal (~ 1 X 106 CFU/ml) throughout the experiment.
  • 13. Procedure Each test tubes were duplicated. 10 Petridis plates were prepared with LB Agar media. Fig.1-Test tubes with media only Fig.2- Petridis plates inside Laminar Air Flow
  • 14. Data set-1 Media [NB Media] (ml) Antibiotic (Tetracycline) (ug/ml) Bacterial concentration (E.Coli) (CFU/ml) Sl. No. 5 0.1 1 X 106 1 5 0.5 1 X 106 2 5 1.0 1 X 106 3 5 2.0 1 X 106 4 5 5.0 1 X 106 5 OD of the fresh culture of Bacteria 1.44
  • 15. Procedure Day-2 Growth were observed and MIC was determined. MIC = 0.5 ug/ml Fig.3- Grown culture at lowest concentration(0.1 ug/ml)
  • 16. Procedure OD was measured(0.448 &0.450) of the grown bacteria at lowest antibiotic concentration(0.1 ug/ml). At lowest antibiotic concentration, the previously grown bacteria at 0.1ug/ml(antibiotic concentration) were grown overnight. [Named M1 and P1]. Again the bacterial concentration was ~ 1 X 106 CFU/ml
  • 17. Procedure P1 was the name of duplicate test tube.  The amount of media was same for M1 & P1 Fig.4- Grown bacteria in M1 and P1
  • 18. Procedure Day-3 Bacteria were taken from M1and P1 and OD were observed.  Again at lowest concentration it was grown overnight and named it M2 And P2. Like this the same procedure was repeated for 5 days.(For further generations)
  • 19. Data Set-2 Bacteria taken from LB Media (ml) Antibiotic (ug/ml) Bacteria (CFU/ml) Name Name Day Sl.No. OD of M1 = 0.645 OD of P1 = 0.639 M1 5 0.1 1 X 106 M2 P2 3 1 OD of M2 = 0.457 OD of P2 = 0.448 M2 5 0.1 1 X 106 M3 P3 4 2 OD of M3 = 1.630 OD of P3 = 1.600 M3 5 0.1 1 X 106 M4 P4 5 3 OD of M4 = 1.604 OD of P4 = 1.590
  • 20. OD of different generations 0 0.2 0.4 0.6 0.8 1 1.2 1.4 1.6 1.8 1 2 3 4 5 6 7 Absorbance No. of days
  • 21. Procedure Bacteria were taken from M4 and OD was measured. Again this bacteria were grown overnight at 5 different concentration of antibiotic. Data set is same as Data Set-1. Next day growth of the bacteria were observed.
  • 22. Final observation Fig.4 – Growth of the bacteria at higher concentration(0.5 ug/ml)
  • 23. Pictorial Comparison Growth of bacteria before evolution Growth of bacteria after evolution Fig.3 Fig.5 0.1 ug/ml 0.1 Ug/ml 0.1 ug/ml 0.1 ug/ml 0.5 ug/ml 0.5 ug/ml
  • 24. Observations Growth of bacteria at higher concentration of antibiotic. Increment in MIC.(From 0.5 to 1.0 ug/ml) Bacteria has developed resistant power.  Increased OD.
  • 25. Conclusion  Bacteria were evolved over time.  From observation we get the expected result.  Difference is due to 3 day gap.  2nd one is for they have developed a high resistance power.
  • 26. How related to Social issues.  Diseases are not cured.  Bacteria getting resistant.  Without prescription only 1 dose will do them resistant.  2 or 4 dose according to the Dr. can kill the bacteria(when life time Is known). Super germs. MRSA-Multidrug resistant staphylococcus Aureus.
  • 27. Limitations Our convention 1 OD @ 600 nm ~ 1 X 109 CFU/ml is an approximate value.  Many generation were kept for three days. We took only one species of bacteria. Triplication
  • 28. More Information Related readings • Evolutionary Biology by Douglas J. Futuyma • Useful Web sites http://www.chm.bris.ac.uk/motm/tetracycline/m ol.htm
  • 29. Acknowledgement We are sincerely thankful to Dr. Anuradha Bhat and Dr. Annagiri Sumana for encouraging us to do this project. We are also thankful to Gregor P. Jose (PhD Student) and Shudhansu Da for their kind help in doing our experiment.