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DICOM Structure Basics  Gunjan Patel MS - Medical software,  BE-Biomedical Engineer PGD-Quality Management Email:  gunjannpatel@gmail.com
Content History Introduction  Why DICOM? DICOM Services Class Basic Terminology Exa.- RIS connection Uses of DIOCM 2
History ,[object Object],Joint effort between Radiologist and Manufacturers to specify ACR-NEMA 1.0 and 2.0 ACR : American College of Radiology NEMA : National Electrical Manufacturer Association ,[object Object],9 parts of DICOM (3.0) ,[object Object],18 parts of DICOM - 126 Supplements DICOM is developed under joint efforts of ACR 	(American College of Radiology)  NEMA 	(National Electrical ManufacturersAssoc.) ……also more than 25  vendors… 3 DICOM is continuously growing
Introduction Digital Imaging and COmmunication in Medicine 4 ,[object Object],[object Object]
Contin…. 6
Contin…. Need for Digital Image Generation  More need for Digital Transfer/Archiving (PACS)  More need for Post-Processing More need for Cross-Vendor Compatibility  Need for Communication via Networks/Media 7
DICOM Services Class 8
9
10
DICOM Terminology DICOM File Format Information Object Definition (IODs) Application Entity Title (AE Title) Service Class User/Provider (SCU/SCP) Unique IDentifier (UID) Transfer Syntax Value Representations (VR) 11
Attribute Name Tag Type Group Length (0002,0000) 1 File Meta Information Version (0002,0001) 1 Media Storage SOP Class UID (0002,0002) 1 Media Storage SOP Instance UID (0002,0003) 1 Transfer Syntax UID (0002,0010) 1 Implementation Class UID (0002,0012) 1 Implementation Version Name (0002,0013) 3 Source Application Entity Title (0002,0016) 3 Private Information Creator UID (0002,0100) 3 Private Information   (0002,0102) 1C DICOM File Format File Preamble 128 Bytes (set to 00H by default) DICOM File Meta Information DICOM Prefix DICM File Meta Eléments ONE DICOM SOP Instance as sent  during network transfer DICOM Data Set Group 0002H elements are alwaysencoded in Explicit VR LittleEndian DICOM File Format   (Ref: PS 3.10, Sec.7.1) A DICOM Image File is more than an image stored in a File 12
13
Patient Entity Rows Study Entity Columns General Image Series Entity ... Image Pixel Pixel Data ... Image Entity Modules IOD Data Elements Information Object Definition  Set of Data Elements that are semantically gathered ,[object Object]
 Modules may be specific   (e.g. CT Image)The atomic piece of information in DICOM - Contains the actual    information 14
“ I am sending a CT Image to you “ A verb (an action) A noun (an object) Service IOD DICOM Service and IOD Real world: DICOM: 15
Application Entity Title (AE Title) AE is essentially the name of a DICOM device or program used to uniquely identify it (you cannot have two identical AEs in your PACS network) Even  though DICOM does not have  strict  requirements  for AE naming, AEs  are  typically  labeled with numbers  and  uppercase  characters  only  – no spaces, punctuation signs, or other characters. In fact, it is not uncommon to see DICOM units  that would accept only uppercase alphanumeric AEs. 16
Application Entity Title (AE Title) 17 John Tom , I am “ Hi . Can I send you a CT Image?“ Communicator’s Names AE Title(s) An AE Title must be UNIQUE on a given network
John Tom , I am “ Hi . Can I send you a CT Image?“ Communication Initiator Name Communication Recipient Name Calling AE Title / Called AE Title CallingAE Title CalledAE Title 18
“ am sending a CT Image to I you “ User Provider Service Class User/Provider (SCU/SCP) SCP SCU ServiceClass User role Service Class Provider role SCU’s are initiating the actions. Therefore,  they are usually initiating the communication  (i.e. the association) 19
[object Object]
Object data may be Images (e.g. CT images), Waveforms, Mammo CAD, etc. RemoteNode Modality Image 1.2.840.15.1 Image Send Response: Status = SUCCESS Store Response Storage (SCU) Storage (SCP) DICOM Storage Other services of DICOM ,[object Object]
Query/Retrieve
Modality Worklist20
Unique IDentifier (UID) ,[object Object]
A UID is a string of up to 64 Characters including digit numbers (“0” to “9”) and “.” e.g. SOP Instance UID= 1.2.840.113619.2.65.3.200583648570.2428.1178103577.1
No Leading zero’s in UID string components are allowed.1.2.840.115621.4.3.0596632.726 – ill formatted 	But a single zero component is OK 1.2.840.115621.2.0.456.632.478 – Format is correct ,[object Object]
A SOP Instance UID of an image shall never be equal to the SOP Instance UID of another image
An Image SOP Instance UID shall never be equal to a Series Instance UID21
Transfer Syntax ,[object Object],Example: Two different Transfer Syntaxes to represent the same information Rx II The same semantic is conveyed, but using different encoding mechanisms 22
Big Endian Little Endian 68 35 68 35 1 Byte 1 Byte 1 Byte 1 Byte DICOM Transfer Syntaxes (cont’d) ,[object Object],DICOM defines two different byte orderings that affect binary values sent on more than 1 byte (typically: short integer,  long integer, float values). Example on a 2 byte value: 0x3568 versus 23
DICOM Transfer Syntaxes (cont’d) ,[object Object],VRstands for Value Representation. It describes the type and the format of the information sent in a DICOM Data Element. For instance, the Patient Date of Birth format is a 8 characters string following the format : YYYYMMDD (e.g. 19980625) Explicit VRmeans that the VR is (explicitly) sent in the DICOM Message. Implicit VRmeans that no VR is sent in the message. Therefore, to know the VR, a product will have to use its own internal dictionary. In both cases, the VR used by products for Standard Elements shall be the same as the one defined in the DICOM Data Dictionary 24
 Value Representations (VR) Clinical data comes  in a wide variety of  formats. Ex. Distances measured in millimeters,	time  in seconds,  patient names are  typically written  in alpha-betic characters, and so on.  The DICOM standard defnes 27 basic data types, known as value representations (VRs),  which are designed  to encapsulate all possible clinical data types.  Each VR has its own abbreviated two-letter name, a defnition of what it represents, a description of what characters are allowed in its data, and a pre-scribed data length. 25
A specific VR for each need DICOM defines a set of 27 VRs identified with two capital letters. For instance: ,[object Object]
DA: Date
TM: Time
DT: DateTime

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DICOM Structure Basics

  • 1. DICOM Structure Basics Gunjan Patel MS - Medical software, BE-Biomedical Engineer PGD-Quality Management Email: gunjannpatel@gmail.com
  • 2. Content History Introduction Why DICOM? DICOM Services Class Basic Terminology Exa.- RIS connection Uses of DIOCM 2
  • 3.
  • 4.
  • 6. Contin…. Need for Digital Image Generation More need for Digital Transfer/Archiving (PACS) More need for Post-Processing More need for Cross-Vendor Compatibility Need for Communication via Networks/Media 7
  • 8. 9
  • 9. 10
  • 10. DICOM Terminology DICOM File Format Information Object Definition (IODs) Application Entity Title (AE Title) Service Class User/Provider (SCU/SCP) Unique IDentifier (UID) Transfer Syntax Value Representations (VR) 11
  • 11. Attribute Name Tag Type Group Length (0002,0000) 1 File Meta Information Version (0002,0001) 1 Media Storage SOP Class UID (0002,0002) 1 Media Storage SOP Instance UID (0002,0003) 1 Transfer Syntax UID (0002,0010) 1 Implementation Class UID (0002,0012) 1 Implementation Version Name (0002,0013) 3 Source Application Entity Title (0002,0016) 3 Private Information Creator UID (0002,0100) 3 Private Information   (0002,0102) 1C DICOM File Format File Preamble 128 Bytes (set to 00H by default) DICOM File Meta Information DICOM Prefix DICM File Meta Eléments ONE DICOM SOP Instance as sent during network transfer DICOM Data Set Group 0002H elements are alwaysencoded in Explicit VR LittleEndian DICOM File Format (Ref: PS 3.10, Sec.7.1) A DICOM Image File is more than an image stored in a File 12
  • 12. 13
  • 13.
  • 14. Modules may be specific (e.g. CT Image)The atomic piece of information in DICOM - Contains the actual information 14
  • 15. “ I am sending a CT Image to you “ A verb (an action) A noun (an object) Service IOD DICOM Service and IOD Real world: DICOM: 15
  • 16. Application Entity Title (AE Title) AE is essentially the name of a DICOM device or program used to uniquely identify it (you cannot have two identical AEs in your PACS network) Even though DICOM does not have strict requirements for AE naming, AEs are typically labeled with numbers and uppercase characters only – no spaces, punctuation signs, or other characters. In fact, it is not uncommon to see DICOM units that would accept only uppercase alphanumeric AEs. 16
  • 17. Application Entity Title (AE Title) 17 John Tom , I am “ Hi . Can I send you a CT Image?“ Communicator’s Names AE Title(s) An AE Title must be UNIQUE on a given network
  • 18. John Tom , I am “ Hi . Can I send you a CT Image?“ Communication Initiator Name Communication Recipient Name Calling AE Title / Called AE Title CallingAE Title CalledAE Title 18
  • 19. “ am sending a CT Image to I you “ User Provider Service Class User/Provider (SCU/SCP) SCP SCU ServiceClass User role Service Class Provider role SCU’s are initiating the actions. Therefore, they are usually initiating the communication (i.e. the association) 19
  • 20.
  • 21.
  • 24.
  • 25. A UID is a string of up to 64 Characters including digit numbers (“0” to “9”) and “.” e.g. SOP Instance UID= 1.2.840.113619.2.65.3.200583648570.2428.1178103577.1
  • 26.
  • 27. A SOP Instance UID of an image shall never be equal to the SOP Instance UID of another image
  • 28. An Image SOP Instance UID shall never be equal to a Series Instance UID21
  • 29.
  • 30.
  • 31.
  • 32. Value Representations (VR) Clinical data comes in a wide variety of formats. Ex. Distances measured in millimeters, time in seconds, patient names are typically written in alpha-betic characters, and so on. The DICOM standard defnes 27 basic data types, known as value representations (VRs), which are designed to encapsulate all possible clinical data types. Each VR has its own abbreviated two-letter name, a defnition of what it represents, a description of what characters are allowed in its data, and a pre-scribed data length. 25
  • 33.
  • 43.
  • 57. 27
  • 58. 28
  • 59. 29
  • 60. 30
  • 61.
  • 62. A lot of flexibility to support all features available on various vendor’s printers31
  • 63. MEDICAL DIRECTORY DICOM for Media Interchange The DICOM Directory (a.k.a. DICOMDIR) facilitates media browsing The same image objects as defined for Network exchange are usable on physical media ALL DICOM INFORMATION OBJECTS DICOM File Format ISO 9660 UDF FAT 16 FS ISO 9660 Level 1 DOS DOS 130 mmMOD (650 MB, 1.2, 2.3, 4.1GB) 90 mm MOD (128, 230, 540, 640 MB, 1.3, 2.3 GB) DVD-ROM -R/+R/-RW/+RW CD-ROMCD-R USBMedia DICOM Relies on Broadly Available Media Storage Technology 32
  • 65. Feedback and Query ??? 34
  • 66. “Save Paper, Save Earth, Save US” Thank you !!! Email : gunjannpatel@gmail.com www.bmeportal.ning.com 35
  • 67. Referances DICOM Cook Book -for Implementations in Modalities Digital Imaging and Communication in Medicine (DICOM)- OS Priyankh http://www.mediacy.com/index.aspx?page=IQDICOM_Service http://medical.nema.org/ 36

Notes de l'éditeur

  1. grows to become either (Little Endian): F E D C B A 9 8 7 6 5 4 3 2 1 0 0000 00 00 00 00 00 00 00 00 00 00 00 00 00 00 43 21or (Big Endian) F E D C B A 9 8 7 6 5 4 3 2 1 0 0000 00 00 00 00 00 00 00 00 00 00 00 00 00 00 21 43