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Reference management :
trends and tricks
Alison McNab
University of Huddersfield
@AlisonMcNab @hudlib
Outline
• What do you use?
• An overview of developments in reference
management software
• Integration with other research tools
• Smart use of reference management software
Results of audience poll:
What RM software do you use?
Why use reference management
software?
• Save and organize references in one place
• Import references and PDFs from e-sources
• Store and annotate PDFs
• Search and update references
• Insert citations into text
• Automatically create a reference list in document
• Reformat referencing style for alternative outputs
• Share references with colleagues and peers
5
Reference management options
6
• Lots of choice!
• Web and/or desktop
• Browser based
• Licensing:
• Individual or site subscription
• Open source / freemium
Reference management
apps for mobile devices
More than just reference
management
• PDF annotation
• Manuscript preparation / submission
• Shared libraries
• Systematic reviews
Reference management tools in context
Source: http://dashboard101innovations.silk.co/page/Research-activities
All change!
• BibTeX – succeeded by BibLaTeX
• Citavi – group options and Citavi 6 beta released
• Colwiz – purchased by Taylor & Francis
• EndNote X7 updated to EndNote X8
• Mendeley – diversifying content, single Elsevier sign-in
• ReadCube –ReadCube Papers app in development
• RefME – acquired (then decommissioned) by Cite This For Me
(CtFM)
• New RefWorks replaced Flow and Legacy RefWorks
Recent new / improved features in RM tools have included:
annotation of PDFs, recommendations, improved sharing of
references, and managing research data
New kids on the block
• PaperHive (browser extension for Firefox and Chrome).
Researchers and students collect the articles relevant for them in
their own Hives and receive personalized notifications for
updates and new comments.
• PaperPile (built for Chrome and Google Apps). Particular
emphasis on integration with Google Docs and Google Scholar,
plus subject repositories.
New kids on the block
• CanaryHaz launched, then became Kopernio
– finds best available PDF of academic articles while you
browse
– stores your saved PDFs in a locker
• “Where possible, Kopernio retrieves the final published version
of an article”. If article is not OA or subscription access, Kopernio
will try find an alternative version (pre-prints and author
manuscripts deposited in institutional repositories)
• Requires access to, and storage of, your library log-in credentials
• Alternative plug-ins to find academic articles:
Open Access Button and UnPayWall
Word processor integration
• Where there is a site license to a product, most IT support will
turn on the options in Word so that these products are
available in the Toolbar
• For use on personal devices, check for a plug-in or cite (while
or as) you write option in the documentation
• The default Referencing tool in Word is also available; this can
subsequently be imported into most RM software
• LaTeX – incorporates basic bibliography tool. BibTeX / LaTeX
offers more flexible and powerful options.
• See:
https://en.wikipedia.org/wiki/Comparison_of_reference_ma
nagement_software#Word_processor_integration
Collaborative writing
• Shared “libraries”
– Citavi
– EndNote
– Mendeley
– PaperPile
– ReadCube
– RefWorks
– Zotero
• Authorea
• Fidus Writer
• IEEE Collabratec
• Overleaf
Integration with BrowZine
Save references to
•EndNote
•Mendeley
•Zotero
•or another PDF-accepting app
https://browzine.com
Integration with BrowZine
Once you have
found an article of
interest, open the
PDF and select this
icon.
You are then
offered a range of
options including
the opportunity to
save to EndNote,
Mendeley or Zotero.
Reference management and NVivo
• Improving Your Literature Review with NVivo
https://youtu.be/cKToOQ64les
• NVivo and Mendeley
https://youtu.be/ddZf3V7EbZ8
• Many more video tutorials at
https://www.youtube.com/user/QSRInternational/
Systematic reviews
Most major RM tools can be used for systematic
reviews
– Specialist import filters
– Take care with deduplication
– Take care with shared libraries
When using Rayyan (web / mobile application to assist
systematic review authors) it is recommended to edit
references in RM software first https://rayyan.qcri.org/
Reference management on your
mobile device
• Adding references when they are mentioned at an
event (if you locate the PDF you can import it)
• Useful for reading and/or annotating PDFs and
editing your Library
• Not designed to support writing although you can
usually email and copy citations
Which software should I choose?
• Where will you be searching for information?
• Library, lab or home?
• Where will you do your reflection and writing?
• Library, lab, home, fieldwork?
• Will you be based in one place or moving
round?
• Will your searching and writing be carried out
from desktop PC/Mac or laptop configured for
RM software?
18
Desktop or Web?
• Desktop options
– EndNote
– Mendeley
– ReadCube
– Zotero
• Desktop can be synchronised with Web and mobile
versions
• Issues using desktop applications over a virtual
network
Troubleshooting and training
• Backup, backup, backup!
• Know what you are looking for….
• VPN / proxy access to RM software and “library”
• Use the publisher’s support materials
• LibGuides
• YouTube channels
• Citation styles
• Webinars
• Try flipped classroom approach
Any questions?

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Reference management : trends and tricks

  • 1. Reference management : trends and tricks Alison McNab University of Huddersfield @AlisonMcNab @hudlib
  • 2. Outline • What do you use? • An overview of developments in reference management software • Integration with other research tools • Smart use of reference management software
  • 3. Results of audience poll: What RM software do you use?
  • 4.
  • 5. Why use reference management software? • Save and organize references in one place • Import references and PDFs from e-sources • Store and annotate PDFs • Search and update references • Insert citations into text • Automatically create a reference list in document • Reformat referencing style for alternative outputs • Share references with colleagues and peers 5
  • 6. Reference management options 6 • Lots of choice! • Web and/or desktop • Browser based • Licensing: • Individual or site subscription • Open source / freemium Reference management apps for mobile devices
  • 7. More than just reference management • PDF annotation • Manuscript preparation / submission • Shared libraries • Systematic reviews Reference management tools in context Source: http://dashboard101innovations.silk.co/page/Research-activities
  • 8. All change! • BibTeX – succeeded by BibLaTeX • Citavi – group options and Citavi 6 beta released • Colwiz – purchased by Taylor & Francis • EndNote X7 updated to EndNote X8 • Mendeley – diversifying content, single Elsevier sign-in • ReadCube –ReadCube Papers app in development • RefME – acquired (then decommissioned) by Cite This For Me (CtFM) • New RefWorks replaced Flow and Legacy RefWorks Recent new / improved features in RM tools have included: annotation of PDFs, recommendations, improved sharing of references, and managing research data
  • 9. New kids on the block • PaperHive (browser extension for Firefox and Chrome). Researchers and students collect the articles relevant for them in their own Hives and receive personalized notifications for updates and new comments. • PaperPile (built for Chrome and Google Apps). Particular emphasis on integration with Google Docs and Google Scholar, plus subject repositories.
  • 10. New kids on the block • CanaryHaz launched, then became Kopernio – finds best available PDF of academic articles while you browse – stores your saved PDFs in a locker • “Where possible, Kopernio retrieves the final published version of an article”. If article is not OA or subscription access, Kopernio will try find an alternative version (pre-prints and author manuscripts deposited in institutional repositories) • Requires access to, and storage of, your library log-in credentials • Alternative plug-ins to find academic articles: Open Access Button and UnPayWall
  • 11. Word processor integration • Where there is a site license to a product, most IT support will turn on the options in Word so that these products are available in the Toolbar • For use on personal devices, check for a plug-in or cite (while or as) you write option in the documentation • The default Referencing tool in Word is also available; this can subsequently be imported into most RM software • LaTeX – incorporates basic bibliography tool. BibTeX / LaTeX offers more flexible and powerful options. • See: https://en.wikipedia.org/wiki/Comparison_of_reference_ma nagement_software#Word_processor_integration
  • 12. Collaborative writing • Shared “libraries” – Citavi – EndNote – Mendeley – PaperPile – ReadCube – RefWorks – Zotero • Authorea • Fidus Writer • IEEE Collabratec • Overleaf
  • 13. Integration with BrowZine Save references to •EndNote •Mendeley •Zotero •or another PDF-accepting app https://browzine.com
  • 14. Integration with BrowZine Once you have found an article of interest, open the PDF and select this icon. You are then offered a range of options including the opportunity to save to EndNote, Mendeley or Zotero.
  • 15. Reference management and NVivo • Improving Your Literature Review with NVivo https://youtu.be/cKToOQ64les • NVivo and Mendeley https://youtu.be/ddZf3V7EbZ8 • Many more video tutorials at https://www.youtube.com/user/QSRInternational/
  • 16. Systematic reviews Most major RM tools can be used for systematic reviews – Specialist import filters – Take care with deduplication – Take care with shared libraries When using Rayyan (web / mobile application to assist systematic review authors) it is recommended to edit references in RM software first https://rayyan.qcri.org/
  • 17. Reference management on your mobile device • Adding references when they are mentioned at an event (if you locate the PDF you can import it) • Useful for reading and/or annotating PDFs and editing your Library • Not designed to support writing although you can usually email and copy citations
  • 18. Which software should I choose? • Where will you be searching for information? • Library, lab or home? • Where will you do your reflection and writing? • Library, lab, home, fieldwork? • Will you be based in one place or moving round? • Will your searching and writing be carried out from desktop PC/Mac or laptop configured for RM software? 18
  • 19. Desktop or Web? • Desktop options – EndNote – Mendeley – ReadCube – Zotero • Desktop can be synchronised with Web and mobile versions • Issues using desktop applications over a virtual network
  • 20. Troubleshooting and training • Backup, backup, backup! • Know what you are looking for…. • VPN / proxy access to RM software and “library” • Use the publisher’s support materials • LibGuides • YouTube channels • Citation styles • Webinars • Try flipped classroom approach

Notes de l'éditeur

  1. An overview and update on how reference management software (including EndNote and RefWorks, supported by CLS) can save time throughout the research process. This session will explore: new features and software solutions, integration with other University and library services discussed, and the opportunity offered by mobile apps to access and manage your research library on the move.
  2. Some RM tools are can be purchased on an individual or site subscription and others are open source / freemium software
  3. Manuscript preparation / submission – collaborative writing with built-in reference management facilities
  4. Publishers buying up RM software – so they have software across the scholarly communications spectrum Legacy RefWorks is still available – ProQuest aiming to decommission it in 2019 but assured us it wouldn't be switched off until every issue was resolved and everyone had migrated. BibTeX – now an output option from more subscription databases BibLaTeX is BibTeX done right, move to BibLaTeX if you can. The main thing that most people using BibLaTeX will know is unicode support. BibLaTeX has it, BibTeX doesn’t. http://blog.readcube.com/post/165237712272/glimpse-into-the-new-readcube-papers-app The new app will be a subscription - which means you’ll always be on the latest version and get new features and improvements automatically. Subscribers also receive unlimited article storage in cloud. Existing ReadCube subscriber accounts will be automatically upgraded. Existing Papers users will receive special upgrade pricing. Recently purchased Papers3 customers will receive automatic upgrades to new app.
  5. Bookmarklets and Browser plug-ins
  6. Kopernio is a browser plugin that finds the best available PDF of academic articles while you browse. Behind the scenes Kopernio will search open databases and (where possible) your university's subscriptions to find the best version of the paper for you. https://kopernio.com/faq
  7. Where there is a site license to a product, most IT support will turn on the options in Word so that these products are available in the Toolbar
  8. But… Changes to Mendeley in 2016 required resetting – instructions at http://support.thirdiron.com/knowledgebase/articles/809073-mendeley-sync-used-to-work-but-now-does-not
  9. Rayyan - authors can create systematic reviews, collaborate on them, maintain them over time and get suggestions for article inclusion