The document discusses online resources that can support open drug discovery systems. It outlines how pharmaceutical companies spend billions annually on R&D and how public domain data from sources like literature, patents and databases could provide high value. However, such data is difficult to integrate and navigate due to a lack of standards and interoperability between sources. The Open PHACTS project aims to address this by developing standards to semantically integrate drug discovery data from public and private sources.

1. Online Resources to Support Open Drug Discovery Systems Antony Williams 3 rd Annual Drug Discovery Partnership: Filling the Pipeline, October 2011

5. It is so difficult to navigate… What’s the structure? Are they in our file? What’s similar? What’s the target? Pharmacology data? Known Pathways? Working On Now? Connections to disease? Expressed in right cell type? Competitors? IP?

7. PubChem

8. ChEMBL

9. ChemSpider

10. SciDBs Wiki

12. Pharma are accessing, processing, storing & re-processing Public Domain Drug Discovery Data

13. New trend: Set Data Free on the Web

14. Open Algorithms, Descriptors and Closed Data – Can We Unlock It?

22. Linking “Flavors” of Chemistry

24. Openness and Quality Issues Williams and Ekins, DDT, 16: 747-750 (2011) Science Translational Medicine 2011

27. The Stereochemistry challenge. 12500 chemicals with “missed” stereo

29. NIST Webbook

30. PubChem

31. NPC Browser http://tripod.nih.gov/npc/

35. Synonyms on PubChem

36. Data Proliferation

41. www.chemspider.com

45. Thank you Email: williamsa@rsc.org Twitter: ChemConnector Blog: www.chemspider.com/blog Personal Blog: www.chemconnector.com SLIDES: www.slideshare.net/AntonyWilliams