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Harnessing the Power of Data From Our Bodies –  What I Have Learned by Measuring Myself Invited Talk Diamond Management & Technology Consultants Meeting “ Taming the Torrent: Harnessing the Power of Data” Kohler, WI October 5, 2010 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technology Harry E. Gruber Professor,  Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD Follow me on Twitter: lsmarr
Calit2 Has Been Had a Vision of  “the Digital Transformation of Health” for a Decade ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],www.bodymedia.com The Content of This Slide from 2001 Larry Smarr  Calit2 Talk on Digitally Enabled Genomic Medicine
Nine Years Later I Am Recording My Metabolic Self 7 Week Ave:  2550 Calories Burned/Day  1:31 hr Physical Activity/Day (>3 METs) 7755 Steps/Day (~3.9 Miles) Measure Quantity and Quality of Sleep-- 7 Week Ave:  6:55 hrs with 81% Efficiency www.bodymedia.com
There Are a Rapidly Growing Set of Tests and Strategies for Improving Health and Living Longer http://lifeextensionconference.com/ I am Actively Engaged in All These
Leading Causes of Preventable Deaths in  the United States in the Year 2000 Mokdad AH, Marks JS, Stroup DF, Gerberding JL (March 2004).  "Actual causes of death in the United States, 2000". JAMA 291 (10): 1238–45. doi:10.1001/jama.291.10.1238. PMID 15010446. www.csdp.org/research/1238.pdf.  1/3 of Deaths
During the 2000s, The Fraction of the Population  That is Overweight or Obese Has Greatly Increased Source: Behavioral Risk Factor Surveillance System, CDC (*BMI ≥30, or  ~ 30 lbs. overweight  for 5’ 4” person) 2000 2009
There are a Growing Number of People Who are Measuring and “Tuning” the State of Their Bodies www.xconomy.com/san-diego/2010/05/12/how-internet-pioneer-larry-smarr-lost-20-pounds-by-becoming-a-quantified-self/ 2000 2010 I Arrived from 20 Years in the Midwest in 2000 and Decided to Move Against the Trend
Goal: Lose Weight by Changing What &How Much I Ate, While Increasing Aerobic Exercise Gradually Moving to Zone Diet and  Regular Exercise Back on Track,  Lowering Calories In; Raising Caloric Burn Exercise is Elliptical and Walking Reached Desired Weight Losing Diet Discipline
Goal: Use Strength Training  to Raise My Rest Metabolic Rate Source: Terry Martin, LS Personal Trainer 3x
Goal: Reduce My Body Fat Through Nutrition and Exercise I Lost More Than 1/3 of My Original Body Fat! Fat Loss: Chest First, Then Thighs, & Finally Abs Most of Loss in First 3-4 Years, Then Very Slow Measurements by Trainer Terry Martin % Body Fat Drops From 21% TO 15%
Goals: Reduce Calories, Sugar, and Sodium Intake,  While Increasing Fiber Me Compared to Average American Male Over 60 Also, Average American Drinks 526 12-oz Sodas per Year--Me Zero Data source: American Dietetic Assn
Goal: Quantify Your Food Intake So You Can “Tune” Your Glucose/Insulin System and Lower Inflammation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Computed Average Over 12 Days When at Home for Maximum Accuracy Measure All Food and Drink Components,  Then Use USDA Lookup to Compute Each Item  Still Need to Lower Sugar &  Increase Protein and Decrease Fat by 15%
Goal: Change Your Cholesterol Levels to Lower LDL, Raise HDL, While Lowering Total Began Statin LDL -50% HDL +40% Total -20% Total LDL HDL Raising “Good” HDL Seems Most Difficult Recommended Levels
Goal: Make Major Reductions in LDL Subfractions to Avoid Future Plaque Deposits Began Statin Data Source: Scripps Clinic of Integrative Medicine Larger LDLs Smaller LDLs -60% -80%
Goal: Lower Triglycerides and Cholesterol Ratios  to Reduce Future Risk of Diabetes and Heart Disease ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],“ The Ratio of Triglycerides to  HDL Cholesterol (TG/HDL-C) is the Single Most Powerful  Lipid Predictor of  Extensive Coronary Disease.” [Clinics 2008; v.64: 427-432]
Goal: Improve My Omega-3 Scores To Protect Against Future Heart Disease If your Omega-3 Score  is at least 7.2 and your DHA Score is at least  4.5, you are 32% less likely to develop heart disease If your EPA+DHA Score is at least 4.6, you are 70% less likely of dying from a heart attack.  Ref: Based on Lemaitre et al., n-3 Polyunsaturated fatty acids, fatal ischemic heart disease, and nonfatal myocardial infarction in older adults: the Cardiovascular Health Study. Am. J. Clin. Nutr. 77:319-325 (2003).  Graphics from www.anne-marie.ca/ratiokits/ = My Values Tested by yourfuturehealth.com
Goal: Lower Ratio of Arachidonic Acid to EPA  to Reduce Pro-Inflammatory Potential of Your Cells Range Source: Barry Sears My Tests by www.yourfuturehealth.com Chronically Ill American Average “Healthy” American Ideal Range My Range “ Silent Inflammation”
Goal—Lower Stress and Cortisol Levels: Use Saliva Tests to Quantify ,[object Object],[object Object],Adrenal Glands Produce Cortisol, DHEA, and Adrenaline Coupled to Cholesterol Cycle
Goal: Quantitatively Monitor the State of Your Inflammation and Immune System  hsCRP Should Be <100 “ Come Back When You Have a Symptom” Invisible Episodic Immune Response hsCRP from  Blood Tests Others from  Stool Tests by  yourfuturehealth.com Lactorferrin Should Be <73 25x Normal 15x Normal Future Challenge: Danger of Persistent hsCRP Inflammation and Destabilized Microbiome  ? Symptom:  Acute Diverticulitis Antibiotics
Goal: Monitor the Colon Microbiome- an Ecological Battle Between Beneficial and Harmful Bacteria TheTwo Years Following 10 Days of Antibiotics (Levaquin  & Metronidaloze) Next Step Get DNA  Microbe, Parasite,  Yeast Test These Tests Culture Bacteria Bacterial Cells Are 90% of the Cells in Your Body! Stool tests by www.yourfuturehealth.com All 3+ or 4+ Two 0+
The Human Microbiome is the Next Large NIH Drive  to Understand Human Health and Disease ,[object Object],[object Object],[object Object],“ Diversity of the Human Intestinal Microbial Flora”  Paul B. Eckburg, et al  Science  (10 June 2005) 395 Phylotypes
The Vision of Predictive, Personalized,  Preventive, & Participatory Medicine www.newsweek.com/2009/06/26/a-doctor-s-vision-of-the-future-of-medicine.html
Disease Arises from Perturbed Cellular Networks: Dynamics of a Prion Perturbed Network in Mice Source: Lee Hood, ISB
Increasing Abundance of Protein A  for Prion-Infected Blood Samples Source: Lee Hood, ISB
Organ-Specific Blood Proteins Will Make the Blood a Window into Health and Disease ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Key Point: Changes in The Levels Of  Organ-Specific Markers Can Assess Virtually All Disease Challenges for a Particular Organ Source: Lee Hood, ISB
Goal:  Determine the Structural State of  Each Internal Organ and Major Body Subsystems 3D Full Body Scan  mm Accuracy Small Tumors Organ Damage Plaque Sites Virtual Colonoscopy 64 Slice  Heart CT Scan Plaque Sites Valve Anomalies Carotid Ultrasound Imaging Plaque Thickness Physical  Colonoscopy Detect Polyps Colon Disease Stress Test with  Echocariogram Heart Fitness Structural Weakness
What I Learned From Spending  3 Hours Inside of My Body ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
The Rise of Individual and Societal Genomic Testing-Promise and Concerns www.technologyreview.com/biomedicine/25218/
Goal: Measure Your Individual Genetic Predispositions to Future Health Risks You: 1.7% Avg. 3.0% You: 22.4% Avg. 11.4% You: 14.7% Avg. 23.7%
However, SNP Indications of Adverse Drug Side Effects May Be Quite Useful Increased Risk Greatly Increased Risk I Would Definitely Not Take Either!
The Cost for Full Human Genome Sequencing  is Exponentially Decreasing  http://blogs.forbes.com/sciencebiz/2010/06/03/your-genome-is-coming/
Should You Keep Your Health Data Private  or Share to Gain the Most Knowledge?
You Can Download This Presentation  at lsmarr.calit2.net

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Harnessing the Power of Data From Our Bodies – What I Have Learned by Measuring Myself

  • 1. Harnessing the Power of Data From Our Bodies – What I Have Learned by Measuring Myself Invited Talk Diamond Management & Technology Consultants Meeting “ Taming the Torrent: Harnessing the Power of Data” Kohler, WI October 5, 2010 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technology Harry E. Gruber Professor, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD Follow me on Twitter: lsmarr
  • 2.
  • 3. Nine Years Later I Am Recording My Metabolic Self 7 Week Ave: 2550 Calories Burned/Day 1:31 hr Physical Activity/Day (>3 METs) 7755 Steps/Day (~3.9 Miles) Measure Quantity and Quality of Sleep-- 7 Week Ave: 6:55 hrs with 81% Efficiency www.bodymedia.com
  • 4. There Are a Rapidly Growing Set of Tests and Strategies for Improving Health and Living Longer http://lifeextensionconference.com/ I am Actively Engaged in All These
  • 5. Leading Causes of Preventable Deaths in the United States in the Year 2000 Mokdad AH, Marks JS, Stroup DF, Gerberding JL (March 2004). &quot;Actual causes of death in the United States, 2000&quot;. JAMA 291 (10): 1238–45. doi:10.1001/jama.291.10.1238. PMID 15010446. www.csdp.org/research/1238.pdf. 1/3 of Deaths
  • 6. During the 2000s, The Fraction of the Population That is Overweight or Obese Has Greatly Increased Source: Behavioral Risk Factor Surveillance System, CDC (*BMI ≥30, or ~ 30 lbs. overweight for 5’ 4” person) 2000 2009
  • 7. There are a Growing Number of People Who are Measuring and “Tuning” the State of Their Bodies www.xconomy.com/san-diego/2010/05/12/how-internet-pioneer-larry-smarr-lost-20-pounds-by-becoming-a-quantified-self/ 2000 2010 I Arrived from 20 Years in the Midwest in 2000 and Decided to Move Against the Trend
  • 8. Goal: Lose Weight by Changing What &How Much I Ate, While Increasing Aerobic Exercise Gradually Moving to Zone Diet and Regular Exercise Back on Track, Lowering Calories In; Raising Caloric Burn Exercise is Elliptical and Walking Reached Desired Weight Losing Diet Discipline
  • 9. Goal: Use Strength Training to Raise My Rest Metabolic Rate Source: Terry Martin, LS Personal Trainer 3x
  • 10. Goal: Reduce My Body Fat Through Nutrition and Exercise I Lost More Than 1/3 of My Original Body Fat! Fat Loss: Chest First, Then Thighs, & Finally Abs Most of Loss in First 3-4 Years, Then Very Slow Measurements by Trainer Terry Martin % Body Fat Drops From 21% TO 15%
  • 11. Goals: Reduce Calories, Sugar, and Sodium Intake, While Increasing Fiber Me Compared to Average American Male Over 60 Also, Average American Drinks 526 12-oz Sodas per Year--Me Zero Data source: American Dietetic Assn
  • 12.
  • 13. Goal: Change Your Cholesterol Levels to Lower LDL, Raise HDL, While Lowering Total Began Statin LDL -50% HDL +40% Total -20% Total LDL HDL Raising “Good” HDL Seems Most Difficult Recommended Levels
  • 14. Goal: Make Major Reductions in LDL Subfractions to Avoid Future Plaque Deposits Began Statin Data Source: Scripps Clinic of Integrative Medicine Larger LDLs Smaller LDLs -60% -80%
  • 15.
  • 16. Goal: Improve My Omega-3 Scores To Protect Against Future Heart Disease If your Omega-3 Score is at least 7.2 and your DHA Score is at least 4.5, you are 32% less likely to develop heart disease If your EPA+DHA Score is at least 4.6, you are 70% less likely of dying from a heart attack. Ref: Based on Lemaitre et al., n-3 Polyunsaturated fatty acids, fatal ischemic heart disease, and nonfatal myocardial infarction in older adults: the Cardiovascular Health Study. Am. J. Clin. Nutr. 77:319-325 (2003). Graphics from www.anne-marie.ca/ratiokits/ = My Values Tested by yourfuturehealth.com
  • 17. Goal: Lower Ratio of Arachidonic Acid to EPA to Reduce Pro-Inflammatory Potential of Your Cells Range Source: Barry Sears My Tests by www.yourfuturehealth.com Chronically Ill American Average “Healthy” American Ideal Range My Range “ Silent Inflammation”
  • 18.
  • 19. Goal: Quantitatively Monitor the State of Your Inflammation and Immune System hsCRP Should Be <100 “ Come Back When You Have a Symptom” Invisible Episodic Immune Response hsCRP from Blood Tests Others from Stool Tests by yourfuturehealth.com Lactorferrin Should Be <73 25x Normal 15x Normal Future Challenge: Danger of Persistent hsCRP Inflammation and Destabilized Microbiome ? Symptom: Acute Diverticulitis Antibiotics
  • 20. Goal: Monitor the Colon Microbiome- an Ecological Battle Between Beneficial and Harmful Bacteria TheTwo Years Following 10 Days of Antibiotics (Levaquin & Metronidaloze) Next Step Get DNA Microbe, Parasite, Yeast Test These Tests Culture Bacteria Bacterial Cells Are 90% of the Cells in Your Body! Stool tests by www.yourfuturehealth.com All 3+ or 4+ Two 0+
  • 21.
  • 22. The Vision of Predictive, Personalized, Preventive, & Participatory Medicine www.newsweek.com/2009/06/26/a-doctor-s-vision-of-the-future-of-medicine.html
  • 23. Disease Arises from Perturbed Cellular Networks: Dynamics of a Prion Perturbed Network in Mice Source: Lee Hood, ISB
  • 24. Increasing Abundance of Protein A for Prion-Infected Blood Samples Source: Lee Hood, ISB
  • 25.
  • 26. Goal: Determine the Structural State of Each Internal Organ and Major Body Subsystems 3D Full Body Scan mm Accuracy Small Tumors Organ Damage Plaque Sites Virtual Colonoscopy 64 Slice Heart CT Scan Plaque Sites Valve Anomalies Carotid Ultrasound Imaging Plaque Thickness Physical Colonoscopy Detect Polyps Colon Disease Stress Test with Echocariogram Heart Fitness Structural Weakness
  • 27.
  • 28. The Rise of Individual and Societal Genomic Testing-Promise and Concerns www.technologyreview.com/biomedicine/25218/
  • 29. Goal: Measure Your Individual Genetic Predispositions to Future Health Risks You: 1.7% Avg. 3.0% You: 22.4% Avg. 11.4% You: 14.7% Avg. 23.7%
  • 30. However, SNP Indications of Adverse Drug Side Effects May Be Quite Useful Increased Risk Greatly Increased Risk I Would Definitely Not Take Either!
  • 31. The Cost for Full Human Genome Sequencing is Exponentially Decreasing http://blogs.forbes.com/sciencebiz/2010/06/03/your-genome-is-coming/
  • 32. Should You Keep Your Health Data Private or Share to Gain the Most Knowledge?
  • 33. You Can Download This Presentation at lsmarr.calit2.net