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Into the wild: documenting and predicting
 the spread of Pacific oysters (Crassostrea
         gigas) in Ireland
                               Judith Kochmann




   GREP in Sustainable Development, Urban Institute Ireland, UCD
   Supervisor: Tasman Crowe
   Collaborators: Francis O’Beirn (MI), Jon Yearsley (UCD), Stefano Mariani
   (The University of Salford), Jens Carlsson (UCC)
Influences of aquaculture on ecosystems

  • Interactions with wild-fisheries resources
     • capture of seed mussels
     • fish capture for feed production
  • Physical changes to the habitat
     • addition of structures
  • Organic and nutrient enrichment              photo: Valdimar Ingi Gunnarsson

  • Invasive species
     • Vectors, escapes, facilitation
  • Interactions with seals and birds
     • positive and negative
Ireland




   • One of the three main aquaculture species in Ireland is
     the Pacific oyster
   • Pacific oysters cultured on intertidal trestles since early
     1970`s
   • 6-7 k tonnes produced in 2007, valued € 15 million
Pacific oyster




                                                 1950`s


                                        1960`s




                               1920`s




• Shell length of 30-40 cm,
  up to 1 kg live wet weight
Range of impacts

   • Invasive populations in many parts of the world with
     significant changes on ecosystems:
      • decrease carrying capacity, especially of aquaculture
        bays
      • native mussels show reduced growth between
        oysters
      • act as a vector for other non-native species

   • Most obvious and significant change is change of habitat
     structure
Shift from mussel beds to oyster reefs in the Wadden Sea

  Oyster reef

   Blue mussel bed
Pacific oyster in



  • Thought not to be able to reproduce in Ireland

  • Some individuals observed outside aquaculture

  • Extent of feral populations not known
Aims

 • Aim 1 Characterise the distribution and abundance of
   Pacific oysters in Ireland – observational approach

 • Aim 2 Test the influence of relevant factors on survival
   and growth of oysters – experimental approach

 • Aim 3 Comparison of genetic structure between feral
   and aquaculture oyster populations - molecular tools
Aim 1

  • Aim 1: Characterise the distribution and abundance of
    Pacific oysters in Ireland

    Assess the current range and status of Pacific oysters
     in Ireland

    Identify main factors associated with the
     presence/absence of oysters – observational
     approach
Sampling Design

 • 2009 sampling programme
   undertaken together with Marine
   Institute, Lough’s Agency, Queen’s
   University Belfast, BIM
 • Repeatable, cost effective protocol
   developed

    • Semi-quantitative assessment of
      abundance and habitat types at all sites
      (SACFOR, EUNIS framework)

    • Quantitative transects to assess
      maximal densities and small-scale
      habitat associations
Distribution and abundance
• Oysters were found at
  18 out of 69 sites visited

• Transect results:
   • Lough Swilly, rocky shore:
     6.3 ind/m2
   • Lough Foyle, mussel bed:
     5.4 ind./m2
   • Shannon Estuary, rocky
     shore: 0.7 ind./m2

                                  common
                                  frequent
                                  occasional
                                  rare
                                  absent
Size frequencies


               20
                        Lough Swilly, rocky shore
                                n=182
               15
   Frequency




               10



                5



                0
                    0         20          40           60         80     100   120   140
                                                    oyster length (mm)


    • Sizes ranged from 25 – 135 mm indicating several
      recruitment events
Environmental factors
• Probability of oyster presence was assessed as a function
  of variables using logistic regression and stepwise model
  selection (AIC)
• Factors explaining oyster presence best:
  Aquaculture present
  but > 500 m;
  p = 0.035             Hard substrate and
                        biogenic reef;
                        p = 0.002
                                             Shore width > 50 m;
                                             p = 0.010
  Residence time;
  p = 0.001
Aim 2
 • Aim 2: Test the influence of relevant factors on survival
   and growth of oysters – experimental approach
         Macroalgae                       Predators
  • Modify flow, affecting        • Consume juvenile stages
    sediment (-) or food (+)
  • Smother and interfere
    with filter apparatus



                           Interaction
        • Macroalgae may increase influence of predation
          by providing habitat for predators
Aim 2

                       10 individuals per tile




  1. Macroalgae



  2. Predation


    No cage      Cage control    Cage       No cage     Cage control   Cage




                                Replicated at 2 sites
Results - survival

                        100


                         80
         survival (%)




                         60


                         40


                         20


                         0
                              +   -   cc   +    -      cc




             • Strong effect of predation in pilot study
               July 2010, mean oysters size 16 mm
Ballynacourty            Rinville
               100


               80
survival (%)




               60


               40


               20


                0
                     +   -   cc   +    -     cc   +       -      cc   +   -   cc



      • effect of predation absent in September
        2011, mean oysters size 36 mm
Results - growth

                        40                                                                *
                                  Rinville                                         *
                        35
                                                                            *
   oyster growth (mm)




                        30                            *             *
                        25

                        20
                                                                              with macroalgae
                        15                                                    without macroalgae

                        10

                         5

                         0
                         7/3/11              9/3/11   11/3/11   1/3/12   3/3/12        5/3/12




                    • Significant larger growth (*) without macroalgae in
                      Rinville
Results - growth
                        40
                                 Ballynacourty
                        35

                        30
   oyster growth (mm)




                                                     *
                        25                       *
                        20

                        15                                                       with macroalgae
                                                                                 without macroalgae
                        10

                        5

                        0
                        7/3/11          9/3/11       11/3/11   1/3/12   3/3/12           5/3/12



                         • Opposite pattern, but not significant
                         • Condition index May 2012 (DTW*1000/DSW)
                          no significant effect of macroalgae
Aim 3
  • Aim 3: Comparison of genetic structure between feral
    and aquaculture oyster populations
         Establish whether oysters outside aquaculture are forming
          self-sustaining populations or are the result of repeated
          spawning from aquaculture



                                             vs




                                                   1 Bay
                                                   2 Populations
                                                   3 Size classes
                                                  14 Microsatellites
Results

      • Evidence for the uncoupling of aquaculture and feral
        populations

      • Self-recruitment of feral populations likely




Genetic evidence for the uncoupling of local aquaculture activities and a population of an invasive species – a case
study of Pacific oysters (Crassostrea gigas) by J Kochmann, J Carlsson, T P Crowe, S Mariani (accepted by Journal of
Heredity)
Summary

• Pacific oysters are established in Ireland and most likely
  self-recruiting

• No dense reefs in the intertidal

• Several cohorts present and new recruits found in 2011

• Occurrences known from shallow subtidal native oyster
  beds (report by Marine Institute and BIM 2011)
   • 5.64 million feral Pacific oysters estimated for Lough Swilly in
     intertidal/subtidal habitats
Summary

 • Oyster presence strongly associated with hard
   substrata and biogenic reef, long residence times
   of embayments and large intertidal areas



 • Macroalgae and predators can influence growth
   and survival, but effects vary
Summary

  • Although feral oysters can be demographically
    uncoupled from closest aquaculture, further sampling
    of bays without aquaculture is needed to characterise
    the association of aquaculture more fully

  • Sampling protocol provides a baseline and repeatable
    method for future sampling by state agencies

  • Combination of coordinated sampling, experiments and
    molecular tools can help to identify factors associated
    with spread of oysters and inform strategies for
    adaptation and control
Thank you for your attention!
Acknowledgements
HELP and ADVICE
• Tasman Crowe
• Francis O’Beirn
• Jon Yearsley
• Stefano Mariani and Jens Carlsson
• Ciarán McGonigle, Loughs Agency
• Grainne O’Brien & regional officers, BIM
• Heike Büttger, BioConsult, Germany
• Claire Guy & Dai Roberts, Queen’s University Belfast

FIELD/LAB WORK
• Jen Coughlan, Rónán Mag Aoidh, Tomasz Dabrowski, Mike Burrows, Sarah Burke, Paul Brooks, Catherine
    Butler, Myriam Callier, Mave Cavanagh, Mozart Fazito, Vangelis & Panagiotis Giannakakis, Dannielle Green, Hao
    Li, Colm Ó Murchú, Silvia Saloni, Peter White, Chloe Kinsella, Caroline Kerrigan, Catherine Collins, Eda
    Ustaoglu, Susanne Schmidt, Jurate Jaraite, Rebecca Doyle, Bas Boots, Erin, Morteza Matkan, Maria Sala-
    Bonzano, Carlotta Sacchi

FUNDING AGENCIES
• IRCSET & IRCHSS (via UCD Graduate Research Education Programme in Sustainable Development)
• SEED funding, UCD

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Into the wild: documenting and predicting the spread of pacific oysters (Crassotrea gigas) in Ireland- Judith Kochmann

  • 1. Into the wild: documenting and predicting the spread of Pacific oysters (Crassostrea gigas) in Ireland Judith Kochmann GREP in Sustainable Development, Urban Institute Ireland, UCD Supervisor: Tasman Crowe Collaborators: Francis O’Beirn (MI), Jon Yearsley (UCD), Stefano Mariani (The University of Salford), Jens Carlsson (UCC)
  • 2. Influences of aquaculture on ecosystems • Interactions with wild-fisheries resources • capture of seed mussels • fish capture for feed production • Physical changes to the habitat • addition of structures • Organic and nutrient enrichment photo: Valdimar Ingi Gunnarsson • Invasive species • Vectors, escapes, facilitation • Interactions with seals and birds • positive and negative
  • 3. Ireland • One of the three main aquaculture species in Ireland is the Pacific oyster • Pacific oysters cultured on intertidal trestles since early 1970`s • 6-7 k tonnes produced in 2007, valued € 15 million
  • 4. Pacific oyster 1950`s 1960`s 1920`s • Shell length of 30-40 cm, up to 1 kg live wet weight
  • 5. Range of impacts • Invasive populations in many parts of the world with significant changes on ecosystems: • decrease carrying capacity, especially of aquaculture bays • native mussels show reduced growth between oysters • act as a vector for other non-native species • Most obvious and significant change is change of habitat structure
  • 6. Shift from mussel beds to oyster reefs in the Wadden Sea Oyster reef Blue mussel bed
  • 7. Pacific oyster in • Thought not to be able to reproduce in Ireland • Some individuals observed outside aquaculture • Extent of feral populations not known
  • 8. Aims • Aim 1 Characterise the distribution and abundance of Pacific oysters in Ireland – observational approach • Aim 2 Test the influence of relevant factors on survival and growth of oysters – experimental approach • Aim 3 Comparison of genetic structure between feral and aquaculture oyster populations - molecular tools
  • 9. Aim 1 • Aim 1: Characterise the distribution and abundance of Pacific oysters in Ireland  Assess the current range and status of Pacific oysters in Ireland  Identify main factors associated with the presence/absence of oysters – observational approach
  • 10. Sampling Design • 2009 sampling programme undertaken together with Marine Institute, Lough’s Agency, Queen’s University Belfast, BIM • Repeatable, cost effective protocol developed • Semi-quantitative assessment of abundance and habitat types at all sites (SACFOR, EUNIS framework) • Quantitative transects to assess maximal densities and small-scale habitat associations
  • 11. Distribution and abundance • Oysters were found at 18 out of 69 sites visited • Transect results: • Lough Swilly, rocky shore: 6.3 ind/m2 • Lough Foyle, mussel bed: 5.4 ind./m2 • Shannon Estuary, rocky shore: 0.7 ind./m2 common frequent occasional rare absent
  • 12. Size frequencies 20 Lough Swilly, rocky shore n=182 15 Frequency 10 5 0 0 20 40 60 80 100 120 140 oyster length (mm) • Sizes ranged from 25 – 135 mm indicating several recruitment events
  • 13. Environmental factors • Probability of oyster presence was assessed as a function of variables using logistic regression and stepwise model selection (AIC) • Factors explaining oyster presence best: Aquaculture present but > 500 m; p = 0.035 Hard substrate and biogenic reef; p = 0.002 Shore width > 50 m; p = 0.010 Residence time; p = 0.001
  • 14. Aim 2 • Aim 2: Test the influence of relevant factors on survival and growth of oysters – experimental approach Macroalgae Predators • Modify flow, affecting • Consume juvenile stages sediment (-) or food (+) • Smother and interfere with filter apparatus Interaction • Macroalgae may increase influence of predation by providing habitat for predators
  • 15. Aim 2 10 individuals per tile 1. Macroalgae 2. Predation No cage Cage control Cage No cage Cage control Cage Replicated at 2 sites
  • 16. Results - survival 100 80 survival (%) 60 40 20 0 + - cc + - cc • Strong effect of predation in pilot study July 2010, mean oysters size 16 mm
  • 17. Ballynacourty Rinville 100 80 survival (%) 60 40 20 0 + - cc + - cc + - cc + - cc • effect of predation absent in September 2011, mean oysters size 36 mm
  • 18. Results - growth 40 * Rinville * 35 * oyster growth (mm) 30 * * 25 20 with macroalgae 15 without macroalgae 10 5 0 7/3/11 9/3/11 11/3/11 1/3/12 3/3/12 5/3/12 • Significant larger growth (*) without macroalgae in Rinville
  • 19. Results - growth 40 Ballynacourty 35 30 oyster growth (mm) * 25 * 20 15 with macroalgae without macroalgae 10 5 0 7/3/11 9/3/11 11/3/11 1/3/12 3/3/12 5/3/12 • Opposite pattern, but not significant • Condition index May 2012 (DTW*1000/DSW)  no significant effect of macroalgae
  • 20. Aim 3 • Aim 3: Comparison of genetic structure between feral and aquaculture oyster populations  Establish whether oysters outside aquaculture are forming self-sustaining populations or are the result of repeated spawning from aquaculture vs 1 Bay 2 Populations 3 Size classes 14 Microsatellites
  • 21. Results • Evidence for the uncoupling of aquaculture and feral populations • Self-recruitment of feral populations likely Genetic evidence for the uncoupling of local aquaculture activities and a population of an invasive species – a case study of Pacific oysters (Crassostrea gigas) by J Kochmann, J Carlsson, T P Crowe, S Mariani (accepted by Journal of Heredity)
  • 22. Summary • Pacific oysters are established in Ireland and most likely self-recruiting • No dense reefs in the intertidal • Several cohorts present and new recruits found in 2011 • Occurrences known from shallow subtidal native oyster beds (report by Marine Institute and BIM 2011) • 5.64 million feral Pacific oysters estimated for Lough Swilly in intertidal/subtidal habitats
  • 23. Summary • Oyster presence strongly associated with hard substrata and biogenic reef, long residence times of embayments and large intertidal areas • Macroalgae and predators can influence growth and survival, but effects vary
  • 24. Summary • Although feral oysters can be demographically uncoupled from closest aquaculture, further sampling of bays without aquaculture is needed to characterise the association of aquaculture more fully • Sampling protocol provides a baseline and repeatable method for future sampling by state agencies • Combination of coordinated sampling, experiments and molecular tools can help to identify factors associated with spread of oysters and inform strategies for adaptation and control
  • 25. Thank you for your attention!
  • 26. Acknowledgements HELP and ADVICE • Tasman Crowe • Francis O’Beirn • Jon Yearsley • Stefano Mariani and Jens Carlsson • Ciarán McGonigle, Loughs Agency • Grainne O’Brien & regional officers, BIM • Heike Büttger, BioConsult, Germany • Claire Guy & Dai Roberts, Queen’s University Belfast FIELD/LAB WORK • Jen Coughlan, Rónán Mag Aoidh, Tomasz Dabrowski, Mike Burrows, Sarah Burke, Paul Brooks, Catherine Butler, Myriam Callier, Mave Cavanagh, Mozart Fazito, Vangelis & Panagiotis Giannakakis, Dannielle Green, Hao Li, Colm Ó Murchú, Silvia Saloni, Peter White, Chloe Kinsella, Caroline Kerrigan, Catherine Collins, Eda Ustaoglu, Susanne Schmidt, Jurate Jaraite, Rebecca Doyle, Bas Boots, Erin, Morteza Matkan, Maria Sala- Bonzano, Carlotta Sacchi FUNDING AGENCIES • IRCSET & IRCHSS (via UCD Graduate Research Education Programme in Sustainable Development) • SEED funding, UCD

Notes de l'éditeur

  1. As Tas Crowe said already this morning, aquaculture is important from an economic point of view but can also have significant impacts on ecosystems. I will focus on aquaculture acting as a vector for non-native species which may become invasive.
  2. Feral oysters = pacific oysters outside aquaculture
  3. Exact number of cohorts or age classes not known but literature comparisons
  4. Factors, that explained oyster presences best were:Although macroalgae could not be tested in the model
  5. Although not tested in the model due to a negative correlation with hard substrata and bioreef, a negative association with macroalage was revealed in small-scale habitat associations, and less oysters were observed at macroalgae-dominated site, more crabs observed
  6. Dramatic effect on small oysters, however, using different locations and different sizes
  7. Shown are mean oyster growth
  8. Relatively high genetic differentiation (FST) of aquaculture and feral populationslarge number of private alleles in feral populationsignificant larger effective population sizes in feral population