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Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 1
The Biopharma Navigator
Semantics in action: up-to-date access and analytics of
millions of Life Science documents
Stefan Geißler, Managing Director, Expert System Deutschland GmbH
ICIC, Heidelberg, Oct 2016
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 2
The challenge
• Many questions and analysis tasks involve huge volumes of
unstructured data
– Which expert is working on which topic?
– In which stage is my competitor’s drug development?
– What adverse events have been reported?
– …
• Many of these require accessing large heterogeneous data sets
– Scientific publications
– Patents
– News
– FDA reports
• How to facilitate and accelerate these types of investigations?
Making search and analysis for researchers and
analysts easier and more efficient
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 3
Introducing the Biopharma Navigator
Semantically enriched, quality approved, up-to-
date information at your fingertips
What is happening? E.G. Chart the
landscape of ongoing trials
What is happening? E.G. Chart the
landscape of ongoing trials
Where and by whom: Find me
experts and their affiliations
Where and by whom: Find me
experts and their affiliations
When: Chronological overview on
current topics
When: Chronological overview on
current topics
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 4
Data Sources
Area of
Interest
Publications
MEDLINE
Daily
Grants
NIH
Weekly
Patents
USPTO
Weekly
News
Releases
& Twitter
Every 30
Minutes
Regulatory
Data
FDA Adverse
Events
FDA Release
Schedule
Clinical
Trials
USA, Europe,
WHO, etc.
Daily to
Weekly
Experts
Multiple
Sources
Daily
Subscription and
Internal Data
Sources
Subscription and
Internal Data
Sources
>15M
>400K
>1.3M
>1.4M>41M
>360K
>9M
Other SourcesOther Sources
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 5
Vocabularies
Condition
Disease, Disorder,
Syndrome
Intervention
Drugs-Chemical
& Biological type
Mechanism of
Action
Organization
Companies,
Universities, Agencies,
Institutions
Source: Medical Subject Headings (MeSH) subset
Source: ChemID Plus & Enriched by us
Source: National Drug File Reference
Terminology (NDFRT) & Enriched by us
Source: Created & Enriched by us
All vocabularies are reviewed, curated and updated on an on-going basis
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 6
From query to overview
Clean, normalized results based on semantic processing
Conditions Sponsors Country
Interventions MoAs Phases
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 7
Compile complex information into
easy-to-digest dashboards
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 8
The Biopharma Navigator
• The Biopharma Navigator is online at
https://www.biopharmanavigator.com/bpn
• Free test account on request (see above)
• Currently almost 1000 experts from the
industry are using the system. The key client
in Sanofi with more than 900 users.
• Online presentation by Archna Bhandari &
Stefan Geißler from Expert System with an
Introduction from Matthias Staab, Global
Head - Published Information Access at
Sanofi, at https://vimeo.com/160332655
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 9
Introducing Expert System
Copyright © 2016 TEMIS - All Rights Reserved - Company Confidential ( ) - Slide 10
• The leading pure-player in semantics & cognitive computing platform: Cogito
• More than 220 people – present in 7 countries
• Multilingual Cognitive Computing, Natural Language Understanding, Information
Extraction and Document Categorization
• Merged with TEMIS in 2015
• The leading pure-player in semantics & cognitive computing platform: Cogito
• More than 220 people – present in 7 countries
• Multilingual Cognitive Computing, Natural Language Understanding, Information
Extraction and Document Categorization
• Merged with TEMIS in 2015
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 11
Expert System clients from Health & Life Sciences
STM Publishing Life Sciences
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 12
What is a semantic platform?
Our semantic network
is a rich map
of definitions of words
and associations
between words.
Semantic network (language ontology) to remove ambiguity.
Sensigrafo
4 million concepts/ 6 million relations
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 13
Metadata generation via our API’s
http://www.intelligenceapi.com

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ICIC 2016: New Product Introduction EXPERT SYSTEM

  • 1. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 1 The Biopharma Navigator Semantics in action: up-to-date access and analytics of millions of Life Science documents Stefan Geißler, Managing Director, Expert System Deutschland GmbH ICIC, Heidelberg, Oct 2016
  • 2. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 2 The challenge • Many questions and analysis tasks involve huge volumes of unstructured data – Which expert is working on which topic? – In which stage is my competitor’s drug development? – What adverse events have been reported? – … • Many of these require accessing large heterogeneous data sets – Scientific publications – Patents – News – FDA reports • How to facilitate and accelerate these types of investigations? Making search and analysis for researchers and analysts easier and more efficient
  • 3. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 3 Introducing the Biopharma Navigator Semantically enriched, quality approved, up-to- date information at your fingertips What is happening? E.G. Chart the landscape of ongoing trials What is happening? E.G. Chart the landscape of ongoing trials Where and by whom: Find me experts and their affiliations Where and by whom: Find me experts and their affiliations When: Chronological overview on current topics When: Chronological overview on current topics
  • 4. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 4 Data Sources Area of Interest Publications MEDLINE Daily Grants NIH Weekly Patents USPTO Weekly News Releases & Twitter Every 30 Minutes Regulatory Data FDA Adverse Events FDA Release Schedule Clinical Trials USA, Europe, WHO, etc. Daily to Weekly Experts Multiple Sources Daily Subscription and Internal Data Sources Subscription and Internal Data Sources >15M >400K >1.3M >1.4M>41M >360K >9M Other SourcesOther Sources
  • 5. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 5 Vocabularies Condition Disease, Disorder, Syndrome Intervention Drugs-Chemical & Biological type Mechanism of Action Organization Companies, Universities, Agencies, Institutions Source: Medical Subject Headings (MeSH) subset Source: ChemID Plus & Enriched by us Source: National Drug File Reference Terminology (NDFRT) & Enriched by us Source: Created & Enriched by us All vocabularies are reviewed, curated and updated on an on-going basis
  • 6. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 6 From query to overview Clean, normalized results based on semantic processing Conditions Sponsors Country Interventions MoAs Phases
  • 7. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 7 Compile complex information into easy-to-digest dashboards
  • 8. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 8 The Biopharma Navigator • The Biopharma Navigator is online at https://www.biopharmanavigator.com/bpn • Free test account on request (see above) • Currently almost 1000 experts from the industry are using the system. The key client in Sanofi with more than 900 users. • Online presentation by Archna Bhandari & Stefan Geißler from Expert System with an Introduction from Matthias Staab, Global Head - Published Information Access at Sanofi, at https://vimeo.com/160332655
  • 9. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 9 Introducing Expert System
  • 10. Copyright © 2016 TEMIS - All Rights Reserved - Company Confidential ( ) - Slide 10 • The leading pure-player in semantics & cognitive computing platform: Cogito • More than 220 people – present in 7 countries • Multilingual Cognitive Computing, Natural Language Understanding, Information Extraction and Document Categorization • Merged with TEMIS in 2015 • The leading pure-player in semantics & cognitive computing platform: Cogito • More than 220 people – present in 7 countries • Multilingual Cognitive Computing, Natural Language Understanding, Information Extraction and Document Categorization • Merged with TEMIS in 2015
  • 11. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 11 Expert System clients from Health & Life Sciences STM Publishing Life Sciences
  • 12. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 12 What is a semantic platform? Our semantic network is a rich map of definitions of words and associations between words. Semantic network (language ontology) to remove ambiguity. Sensigrafo 4 million concepts/ 6 million relations
  • 13. Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 13 Metadata generation via our API’s http://www.intelligenceapi.com