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                20106119 김현철
                20106117 김한얼
                20106155 이형민
                20106133 심재훈
SmoKING
DISEASE
Meta_analysis
> smoking
         qt tt qc tc
Blondal89 37 92 24 90
Campbell91 21 107 21 105
Fagerstrom82 30 50 23 50
Fee82 23 180 15 172
Garcia89 21 68 5 38
                             실패 or 성공
Garvey00 75 405 17 203
Gross95 37 131 6 46
Hall85 18 41 10 36


                             연구자 이름 + 연구 시기
Hall87 30 71 14 68
Hall96 24 98 28 103
Hjalmarson84 31 106 16 100
Huber88 31 54 11 60
Jarvis82 22 58 9 58
Jensen91 90 211 28 82
Killen84 16 44 6 20
Killen90 129 600 112 617
Malcolm80 6 73 3 121
McGovern92 51 146 40 127
                             Qt, tt, qc, tc
Nakamura90 13 30 5 30
Niaura94 5 84 4 89
Pirie92 75 206 50 211
Puska79 29 116 21 113
Schneider85 9 30 6 30
Tonnesen88 23 60 12 53
Villa99 11 21 10 26
Zelman92 23 58 18 58
Meta_analysis
> install.packages("rmeta")
> help(package="rmeta")
                                                   패키지 설치
> library(rmeta)
> smoking.OR<-

                                                   치환
meta.MH(smoking[,"tt"],smoking[,"tc"],smoking[,"
qt"],
smoking[,"qc"], names = rownames(smoking))
> smoking.DSL<-
meta.DSL(smoking[,"tt"],smoking[,"tc"],smoking[,
"qt"],
smoking[,"qc"],names=rownames(smoking))            MH – Fixed
                                                   DSL – Random
> summary(smoking.OR)                                                   > summary(smoking.DSL)
Fixed effects ( Mantel-Haenszel ) meta-analysis                         Random effects ( DerSimonian-Laird ) meta-analysis
Call: meta.MH(ntrt = smoking[, "tt"], nctrl = smoking[, "tc"], ptrt =   Call: meta.DSL(ntrt = smoking[, "tt"], nctrl = smoking[, "tc"], ptrt
smoking[,"qt"], pctrl = smoking[, "qc"], names =                        =
rownames(smoking))                                                      smoking[,"qt"], pctrl = smoking[, "qc"], names =
------------------------------------                                    rownames(smoking))
OR (lower 95% upper)                                                    ------------------------------------
Blondal89 1.85 0.99 3.46                                                OR (lower 95% upper)
Campbell91 0.98 0.50 1.92                                               Blondal89 1.85 0.99 3.46
Fagerstrom82 1.76 0.80 3.89                                             Campbell91 0.98 0.50 1.92
Fee82 1.53 0.77 3.05                                                    Fagerstrom82 1.76 0.80 3.89
Garcia89 2.95 1.01 8.62                                                 Fee82 1.53 0.77 3.05
Garvey00 2.49 1.43 4.34                                                 Garcia89 2.95 1.01 8.62
Gross95 2.62 1.03 6.71                                                  Garvey00 2.49 1.43 4.34
Hall85 2.03 0.78 5.29                                                   Gross95 2.62 1.03 6.71
Hall87 2.82 1.33 5.99                                                   Hall85 2.03 0.78 5.29
Hall96 0.87 0.46 1.64                                                   Hall87 2.82 1.33 5.99
Hjalmarson84 2.17 1.10 4.28                                             Hall96 0.87 0.46 1.64
Huber88 6.00 2.57 14.01                                                 Hjalmarson84 2.17 1.10 4.28
Jarvis82 3.33 1.37 8.08                                                 Huber88 6.00 2.57 14.01
Jensen91 1.43 0.84 2.44                                                 Jarvis82 3.33 1.37 8.08
Killen84 1.33 0.43 4.15                                                 Jensen91 1.43 0.84 2.44
Killen90 1.23 0.93 1.64                                                 Killen84 1.33 0.43 4.15
Malcolm80 3.52 0.85 14.54                                               Killen90 1.23 0.93 1.64
McGovern92 1.17 0.70 1.94                                               Malcolm80 3.52 0.85 14.54
Nakamura90 3.82 1.15 12.71                                              McGovern92 1.17 0.70 1.94
Niaura94 1.34 0.35 5.19                                                 Nakamura90 3.82 1.15 12.71
Pirie92 1.84 1.20 2.82                                                  Niaura94 1.34 0.35 5.19
Puska79 1.46 0.78 2.75                                                  Pirie92 1.84 1.20 2.82
Schneider85 1.71 0.52 5.62                                              Puska79 1.46 0.78 2.75
Tonnesen88 2.12 0.93 4.86                                               Schneider85 1.71 0.52 5.62
Villa99 1.76 0.55 5.64                                                  Tonnesen88 2.12 0.93 4.86
Zelman92 1.46 0.68 3.14                                                 Villa99 1.76 0.55 5.64
------------------------------------                                    Zelman92 1.46 0.68 3.14
Mantel-Haenszel OR =1.67 95% CI ( 1.47,1.9 )                            ------------------------------------
Test for heterogeneity: X^2( 25 ) = 34.9 ( p-value 0.09 )               SummaryOR= 1.75 95% CI ( 1.48,2.07 )
                                                                        Test for heterogeneity: X^2( 25 ) = 34.87 ( p-value 0.0905 )
                                                                        Estimated random effects variance: 0.05
Meta_analysis

                                그래프를 그린다

> layout(matrix(1:2, ncol=2))
> plot(smoking.OR)
> plot(smoking.DSL)
                                Layout 1:2

                                Plot
RESULT
Smoking meta 자료분석

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Smoking meta 자료분석

  • 1. S m o k I n g_m e t a 자료분석 20106119 김현철 20106117 김한얼 20106155 이형민 20106133 심재훈
  • 4. Meta_analysis > smoking qt tt qc tc Blondal89 37 92 24 90 Campbell91 21 107 21 105 Fagerstrom82 30 50 23 50 Fee82 23 180 15 172 Garcia89 21 68 5 38 실패 or 성공 Garvey00 75 405 17 203 Gross95 37 131 6 46 Hall85 18 41 10 36 연구자 이름 + 연구 시기 Hall87 30 71 14 68 Hall96 24 98 28 103 Hjalmarson84 31 106 16 100 Huber88 31 54 11 60 Jarvis82 22 58 9 58 Jensen91 90 211 28 82 Killen84 16 44 6 20 Killen90 129 600 112 617 Malcolm80 6 73 3 121 McGovern92 51 146 40 127 Qt, tt, qc, tc Nakamura90 13 30 5 30 Niaura94 5 84 4 89 Pirie92 75 206 50 211 Puska79 29 116 21 113 Schneider85 9 30 6 30 Tonnesen88 23 60 12 53 Villa99 11 21 10 26 Zelman92 23 58 18 58
  • 5. Meta_analysis > install.packages("rmeta") > help(package="rmeta") 패키지 설치 > library(rmeta) > smoking.OR<- 치환 meta.MH(smoking[,"tt"],smoking[,"tc"],smoking[," qt"], smoking[,"qc"], names = rownames(smoking)) > smoking.DSL<- meta.DSL(smoking[,"tt"],smoking[,"tc"],smoking[, "qt"], smoking[,"qc"],names=rownames(smoking)) MH – Fixed DSL – Random
  • 6. > summary(smoking.OR) > summary(smoking.DSL) Fixed effects ( Mantel-Haenszel ) meta-analysis Random effects ( DerSimonian-Laird ) meta-analysis Call: meta.MH(ntrt = smoking[, "tt"], nctrl = smoking[, "tc"], ptrt = Call: meta.DSL(ntrt = smoking[, "tt"], nctrl = smoking[, "tc"], ptrt smoking[,"qt"], pctrl = smoking[, "qc"], names = = rownames(smoking)) smoking[,"qt"], pctrl = smoking[, "qc"], names = ------------------------------------ rownames(smoking)) OR (lower 95% upper) ------------------------------------ Blondal89 1.85 0.99 3.46 OR (lower 95% upper) Campbell91 0.98 0.50 1.92 Blondal89 1.85 0.99 3.46 Fagerstrom82 1.76 0.80 3.89 Campbell91 0.98 0.50 1.92 Fee82 1.53 0.77 3.05 Fagerstrom82 1.76 0.80 3.89 Garcia89 2.95 1.01 8.62 Fee82 1.53 0.77 3.05 Garvey00 2.49 1.43 4.34 Garcia89 2.95 1.01 8.62 Gross95 2.62 1.03 6.71 Garvey00 2.49 1.43 4.34 Hall85 2.03 0.78 5.29 Gross95 2.62 1.03 6.71 Hall87 2.82 1.33 5.99 Hall85 2.03 0.78 5.29 Hall96 0.87 0.46 1.64 Hall87 2.82 1.33 5.99 Hjalmarson84 2.17 1.10 4.28 Hall96 0.87 0.46 1.64 Huber88 6.00 2.57 14.01 Hjalmarson84 2.17 1.10 4.28 Jarvis82 3.33 1.37 8.08 Huber88 6.00 2.57 14.01 Jensen91 1.43 0.84 2.44 Jarvis82 3.33 1.37 8.08 Killen84 1.33 0.43 4.15 Jensen91 1.43 0.84 2.44 Killen90 1.23 0.93 1.64 Killen84 1.33 0.43 4.15 Malcolm80 3.52 0.85 14.54 Killen90 1.23 0.93 1.64 McGovern92 1.17 0.70 1.94 Malcolm80 3.52 0.85 14.54 Nakamura90 3.82 1.15 12.71 McGovern92 1.17 0.70 1.94 Niaura94 1.34 0.35 5.19 Nakamura90 3.82 1.15 12.71 Pirie92 1.84 1.20 2.82 Niaura94 1.34 0.35 5.19 Puska79 1.46 0.78 2.75 Pirie92 1.84 1.20 2.82 Schneider85 1.71 0.52 5.62 Puska79 1.46 0.78 2.75 Tonnesen88 2.12 0.93 4.86 Schneider85 1.71 0.52 5.62 Villa99 1.76 0.55 5.64 Tonnesen88 2.12 0.93 4.86 Zelman92 1.46 0.68 3.14 Villa99 1.76 0.55 5.64 ------------------------------------ Zelman92 1.46 0.68 3.14 Mantel-Haenszel OR =1.67 95% CI ( 1.47,1.9 ) ------------------------------------ Test for heterogeneity: X^2( 25 ) = 34.9 ( p-value 0.09 ) SummaryOR= 1.75 95% CI ( 1.48,2.07 ) Test for heterogeneity: X^2( 25 ) = 34.87 ( p-value 0.0905 ) Estimated random effects variance: 0.05
  • 7. Meta_analysis 그래프를 그린다 > layout(matrix(1:2, ncol=2)) > plot(smoking.OR) > plot(smoking.DSL) Layout 1:2 Plot