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Principal Component Analysis (PCA)
Principal Component Analysis (PCA)
Principal Component Analysis (PCA)
Luis Serrano
1. Projections
Taking a picture
Taking a picture
Taking a picture
Taking a picture
Taking a picture
Taking a picture
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
Dimensionality Reduction
2. Application to housing
Housing Data
Housing Data
Size
Housing Data
Size
Number of rooms
Housing Data
Size
Number of rooms
Number of bathrooms
Housing Data
Size
Number of rooms
Number of bathrooms
Schools around
Housing Data
Size
Number of rooms
Number of bathrooms
Schools around
Crime rate
Housing Data
Size
Number of rooms
Number of bathrooms
Schools around
Crime rate
Housing Data
Size
Number of rooms
Number of bathrooms
Size feature
Schools around
Crime rate
Housing Data
Size
Number of rooms
Number of bathrooms
Size feature
Schools around
Crime rate
Location feature
100
200
300
400
1 2 3 4
Number of Rooms
Size
5
100
200
300
400
1 2 3 4
Number of Rooms
Size
5
100
200
300
400
1 2 3 4
Number of Rooms
Size
5
100
200
300
400
1 2 3 4
Number of Rooms
Size
5
Size feature
2 dimensions
2 dimensions 1 dimension
2 dimensions 1 dimension
size
number of rooms
2 dimensions 1 dimension
size
number of rooms
size feature
Housing Data
Housing Data
5 dimensions
Housing Data
5 dimensions 2 dimensions
Housing Data
Size
Number of rooms
Number of bathrooms
Schools around
Crime rate
5 dimensions 2 dimensions
Housing Data
Size
Number of rooms
Number of bathrooms
Size feature
Schools around
Crime rate
5 dimensions 2 dimensions
Housing Data
Size
Number of rooms
Number of bathrooms
Size feature
Schools around
Crime rate
Location feature
5 dimensions 2 dimensions
3. Mean, Variance, Covariance
Mean
Mean
Mean
Mean
wall
Mean
1 2 3 4 5 6
wall
Mean
1 2 3 4 5 6
1+2+6
wall
Mean
1 2 3 4 5 6
1+2+6
wall
Mean =
Mean
1 2 3 4 5 6
1+2+6
wall
Mean =
Mean
1 2 3 4 5 6
1+2+6
3wall
Mean =
Mean
1 2 3 4 5 6
1+2+6
3
= 3
wall
Mean =
Mean
1 2 3 4 5 6
1+2+6
3
= 3
wall
Mean =
Variance
Variance
Variance
Variance
Variance
Variance
1 1
Variance
1 1
5 5
Variance
1 1
5 5
Variance =
Variance
1 1
5 5
12
+02
+12
Variance =
Variance
1 1
5 5
12
+02
+12
Variance =
Variance
1 1
5 5
12
+02
+12
3
Variance =
Variance
1 1
5 5
12
+02
+12
3
= 2/3Variance =
Variance
1 1
5 5
12
+02
+12
3
= 2/3Variance =
Variance =
Variance
1 1
5 5
12
+02
+12
3
= 2/3Variance =
52
+02
+52
Variance =
Variance
1 1
5 5
12
+02
+12
3
= 2/3Variance =
52
+02
+52
Variance =
Variance
1 1
5 5
12
+02
+12
3
= 2/3Variance =
52
+02
+52
3
Variance =
Variance
1 1
5 5
12
+02
+12
3
= 2/3Variance =
52
+02
+52
3
= 10/3Variance =
Mean
1 2 3 4 5 6
Mean
2
1 2 3 4 5 6
Mean
2
1
1 2 3 4 5 6
Mean
2
1
3
1 2 3 4 5 6
Mean
2
1
3
1 2 3 4 5 6
Variance =
Mean
2
1
3
1 2 3 4 5 6
22
+12
+32
Variance =
Mean
2
1
3
1 2 3 4 5 6
22
+12
+32
Variance =
Mean
2
1
3
1 2 3 4 5 6
22
+12
+32
3
Variance =
Mean
2
1
3
1 2 3 4 5 6
22
+12
+32
3
= 14/3Variance =
Variance?
Variance?
Variance?
Variance?
Variance?
Variance?
x-variance
Variance?
x-variance
Variance?
x-variance
y-variance
Variance?
Variance?
Variance?
Variance?
Variance?
22 22
Variance?
x-variance =
22
+02
+22
3
= 8/3
22 22
Variance?
x-variance =
22
+02
+22
3
= 8/3
22 22
Variance?
x-variance =
22
+02
+22
3
= 8/3
22 22
1
1
1
1
Variance?
x-variance =
22
+02
+22
3
= 8/3
y-variance =
12
+02
+12
3
= 2/3
22 22
1
1
1
1
Covariance
(0,0)
(2,1)
(2,-1)(-2,-1)
(-2,1)
Covariance
(0,0)
(2,1)
(2,-1)(-2,-1)
(-2,1)
Product
of
coordinates
Covariance
(0,0)
(2,1)
(2,-1)(-2,-1)
(-2,1)
0
Product
of
coordinates
Covariance
(0,0)
(2,1)
(2,-1)(-2,-1)
(-2,1)
+2
0
+2
Product
of
coordinates
Covariance
(0,0)
(2,1)
(2,-1)(-2,-1)
(-2,1)
+2
-2
0
-2
+2
Product
of
coordinates
Covariance
(0,0)
(2,1)
(2,-1)(-2,-1)
(-2,1)
+2
-2
0
-2
+2
Product
of
coordinates
Covariance
(0,0)
(2,1)
(2,-1)(-2,-1)
(-2,1)
+2
-2
0
-2
+2
Product
of
coordinates
Covariance
Covariance
(-2,1)
(2,-1)
-2
-2
(0,0)
0
Covariance
(-2,1)
(2,-1)
-2
-2
(0,0)
0
(2,1)
(-2,-1)
2
2(0,0)
0
Covariance
covariance =
(-2) + 0 + (-2)
3
= -4/3
(-2,1)
(2,-1)
-2
-2
(0,0)
0
(2,1)
(-2,-1)
2
2(0,0)
0
Covariance
covariance =
(-2) + 0 + (-2)
3
= -4/3 covariance =
2 + 0 + 2
3
= 4/3
(-2,1)
(2,-1)
-2
-2
(0,0)
0
(2,1)
(-2,-1)
2
2(0,0)
0
Covariance
(0,0) (2,0)
(2,1)
(2,-1)(0,-1)
(0,1)(-2,1)
(-2,0)
(-2,-1)
Covariance
(0,0) (2,0)
(2,1)
(2,-1)(0,-1)
(0,1)(-2,1)
(-2,0)
(-2,-1)
-2 2
0
0
0
00
-22
Covariance
covariance =
(0,0) (2,0)
(2,1)
(2,-1)(0,-1)
(0,1)(-2,1)
(-2,0)
(-2,-1)
-2 2
0
0
0
00
-22
Covariance
covariance =
+ + + + + + + +
9
(0,0) (2,0)
(2,1)
(2,-1)(0,-1)
(0,1)(-2,1)
(-2,0)
(-2,-1)
-2 2 00 000 -22
Covariance
covariance =
+ + + + + + + +
9
= 0
(0,0) (2,0)
(2,1)
(2,-1)(0,-1)
(0,1)(-2,1)
(-2,0)
(-2,-1)
-2 2 00 000 -22
Covariance
Covariance
Covariance
Covariance
Covariance
negative
covariance
Covariance
negative
covariance
covariance zero
(or very small)
Covariance
negative
covariance
covariance zero
(or very small)
positive
covariance
4. Eigenvectors and Eigenvalues
Covariance matrix
Covariance matrix
Covariance matrix
Var(X)
Covariance matrix
Var(X)
Var(Y)
Covariance matrix
Var(X)
Var(Y)
Cov(X,Y)
Cov(X,Y)
Covariance matrix
Var(X)
Var(Y)
Cov(X,Y)
Cov(X,Y)
=
Covariance matrix
Var(X)
Var(Y)
Cov(X,Y)
Cov(X,Y)
=
9
3
4
4
Linear Transformations
Linear Transformations
9
3
4
4
Linear Transformations
9
3
4
4
Linear Transformations
9
3
4
4
Linear Transformations
9
3
4
4
Linear Transformations
9
3
4
4
(x, y)
Linear Transformations
9
3
4
4
(x, y)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0) (9,4)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0) (9,4)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(9,4)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(9,4)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(9,4)
(4,3)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(9,4)
(4,3)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(9,4)
(4,3)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(9,4)
(4,3)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(9,4)
(4,3)
(-9,-4)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(9,4)
(4,3)
(-9,-4)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(0,-1)
(9,4)
(4,3)
(-9,-4)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(0,-1)
(9,4)
(4,3)
(-9,-4)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(0,-1)
(9,4)
(4,3)
(-9,-4)
(-4,-3)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(0,-1)
(9,4)
(4,3)
(-9,-4)
(-4,-3)
Linear Transformations
9
3
4
4
(x, y) (9x+4y, 4x+3y)
(0,0) (0,0)
(1,0)
(0,1)
(-1,0)
(0,-1)
(9,4)
(4,3)
(-9,-4)
(-4,-3)
Linear Transformations
9
3
4
4
Linear Transformations
9
3
4
4
Linear Transformations
9
3
4
4
Linear Transformations
9
3
4
4
Linear Transformations
9
3
4
4 11
Linear Transformations
9
3
4
4 11
Linear Transformations
9
3
4
4 11
Linear Transformations
9
3
4
4 11
Linear Transformations
9
3
4
4 11
1
Linear Transformations
9
3
4
4
2
1
11
1
Linear Transformations
9
3
4
4
2
1
-1
2
11
1
Linear Transformations
9
3
4
4
2
1
-1
2
Eigenvectors
(direction)
11
1
Linear Transformations
9
3
4
4
2
1
-1
2 11
Eigenvectors
(direction)
11
1
Linear Transformations
9
3
4
4
2
1
-1
2 11 1
Eigenvectors
(direction)
11
1
Linear Transformations
9
3
4
4
2
1
-1
2 11 1
Eigenvectors
(direction)
Eigenvalues
(magnitude)
11
1
Linear Transformations
Linear Transformations
Eigenvectors
Linear Transformations
Eigenvectors
Eigenvalues
Linear Transformations
2
1
Eigenvectors
Eigenvalues
Linear Transformations
2
1
11
Eigenvectors
Eigenvalues
Linear Transformations
2
1
11
Eigenvectors
Eigenvalues
Linear Transformations
2
1
-1
2
11
Eigenvectors
Eigenvalues
Linear Transformations
2
1
-1
2
11 1
Eigenvectors
Eigenvalues
Linear Transformations
2
1
-1
2
11 1
Eigenvectors
Eigenvalues
Linear Transformations
2
1
-1
2
11 1
Eigenvectors
Eigenvalues
Eigenstuff
Eigenstuff
Eigenstuff
Eigenstuff
Eigenstuff
Eigenstuff
Eigenstuff
Eigenstuff
9
3
4
4
Eigenstuff
9
3
4
4
v
Eigenstuff
9
3
4
4
v =
Eigenstuff
9
3
4
4
v =
Eigenstuff
9
3
4
4
v = v
Eigenstuff
9
3
4
4
v = v
Eigenvector
Eigenstuff
9
3
4
4
v = v
Eigenvector
Eigenvalue
Eigenvalues
9
3
4
4
Eigenvalues
Characteristic Polynomial
9
3
4
4
Eigenvalues
Characteristic Polynomial
x-9
x-3
-4
-4
9
3
4
4
Eigenvalues
Characteristic Polynomial
x-9
x-3
-4
-4
= (x-9)(x-3) - (-4)(-4)
9
3
4
4
Eigenvalues
Characteristic Polynomial
x-9
x-3
-4
-4
= (x-9)(x-3) - (-4)(-4) = x2
- 12x + 11
9
3
4
4
Eigenvalues
Characteristic Polynomial
x-9
x-3
-4
-4
= (x-9)(x-3) - (-4)(-4) = x2
- 12x + 11
(x-11)(x-1)=
9
3
4
4
Eigenvalues
Characteristic Polynomial
x-9
x-3
-4
-4
= (x-9)(x-3) - (-4)(-4) = x2
- 12x + 11
(x-11)(x-1)=
Eigenvalues
9
3
4
4
Eigenvalues
Characteristic Polynomial
x-9
x-3
-4
-4
= (x-9)(x-3) - (-4)(-4) = x2
- 12x + 11
(x-11)(x-1)=
Eigenvalues 11
9
3
4
4
Eigenvalues
Characteristic Polynomial
x-9
x-3
-4
-4
= (x-9)(x-3) - (-4)(-4) = x2
- 12x + 11
(x-11)(x-1)=
Eigenvalues 11 and
9
3
4
4
Eigenvalues
Characteristic Polynomial
x-9
x-3
-4
-4
= (x-9)(x-3) - (-4)(-4) = x2
- 12x + 11
(x-11)(x-1)=
Eigenvalues 11 1and
9
3
4
4
Eigenvectors
Eigenvectors
9
3
4
4
Eigenvectors
9
3
4
4
u
v
Eigenvectors
9
3
4
4
u
v
=
Eigenvectors
9
3
4
4
u
v
= 11
Eigenvectors
9
3
4
4
u
v
=
u
v
11
Eigenvectors
9
3
4
4
u
v
=
u
v
11
9
3
4
4
Eigenvectors
9
3
4
4
u
v
=
u
v
11
9
3
4
4
u
v
Eigenvectors
9
3
4
4
u
v
=
u
v
11
9
3
4
4
u
v
=
Eigenvectors
9
3
4
4
u
v
=
u
v
11
9
3
4
4
u
v
= 1
Eigenvectors
9
3
4
4
u
v
=
u
v
11
9
3
4
4
u
v
=
u
v
1
Eigenvectors
9
3
4
4
u
v
=
u
v
11
9
3
4
4
u
v
=
u
v
1
2
1
u
v
=
Eigenvectors
9
3
4
4
u
v
=
u
v
11
9
3
4
4
u
v
=
u
v
1
2
1
u
v
=
-1
2
u
v
=
3blue1brown
4. PCA
Principal Component Analysis (PCA)
Principal Component Analysis (PCA)
Principal Component Analysis (PCA)
=
Principal Component Analysis (PCA)
9
=
Principal Component Analysis (PCA)
9
3
=
Principal Component Analysis (PCA)
9
3
4
4
=
Principal Component Analysis (PCA)
Eigenvectors
9
3
4
4
=
Principal Component Analysis (PCA)
Eigenvectors
9
3
4
4
=
(direction)
Principal Component Analysis (PCA)
Eigenvectors
9
3
4
4
=
Eigenvalues
(direction)
Principal Component Analysis (PCA)
Eigenvectors
9
3
4
4
=
Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
Eigenvectors
9
3
4
4
=
Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
Eigenvectors
9
3
4
4
=
11 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
Eigenvectors
9
3
4
4
=
11 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
-1
2
Eigenvectors
9
3
4
4
=
11 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
-1
2
Eigenvectors
9
3
4
4
=
11 1 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
-1
2
Eigenvectors
9
3
4
4
=
11 1 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
-1
2
Eigenvectors
9
3
4
4
=
11 1 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
-1
2
Eigenvectors
9
3
4
4
=
11 1 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
Eigenvectors
9
3
4
4
=
11 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
Eigenvectors
9
3
4
4
=
11 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
Eigenvectors
9
3
4
4
=
11 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
Eigenvectors
9
3
4
4
=
11 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
2
1
Eigenvectors
9
3
4
4
=
11 Eigenvalues
(direction)
(magnitude)
Principal Component Analysis (PCA)
Principal Component Analysis (PCA)
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PCA (Principal Component Analysis)