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INFLUENZA VIRUS
PRESENTED BY
NAVEED UR REHMAN
BS, MICROBIOLOGY
– Influenza virus is an infectious agent that causes a respiratory tract
infection
– It cause diseases in vertebrates
– It is an antisense single stranded RNA virus
– Influenza virus has three main types i.e. Influenza A, Influenza B,
influenza C
INTRODUCTION
2
Classification
– Group: Group V ((-)ssRNA
– Family: Orthomyxoviridae
– Genus: Influenza virus
– Species: Influenza A, Influenza B, Influenza C
3
Epidemiology
– The epidemiology of influenza although unpredictable
– Influenza outbreaks are known to occur in three patterns:
– Pandemic every 30 to 40 years, with high mortality
– Epidemics much more frequently, with lower mortality
4
Morphology
– Influenza type A, B and C
are similar in structure
– These are roughly spherical
of 80-120nm in dimeter
– Type C may occur as
filamentous
– Outer layer is lipid membrane
Morphology of influenza virus
5
Cont…
– There are two types of projections: hemagglutinin (HA) spikes and
neuraminidase (NA) spikes
– The HA spikes, of which there are about 500 on each virus present
– The NA spikes, of which there are about 100 per virus
– These spikes are composed of glycoproteins
6
Cont…
– NA differs from the HA spikes in appearance and function
– Viral strains are identified by variation in the HA and NA antigens
– The different forms of the antigens are assigned numbers
– For example HI, H2, H3, N1, and N2
– There are 16 subtypes of HA and 9 of NA
7
Cont…
– Complete genome of influenza is segmented into 8
fragments
– Influenza C has 7 fragments of genome
– Genomic size is about 13.5 bp
8
Lifecycle
10
Antigenic shift
– Caused by exchange of genetic materials(RNA)
– New strains generate
– Results in pandemics
– For example, Asian flu by H2N2 subtype in 1958-1959
– Only occur in influenza type A
9
Transmission
– Influenza can spread in three main ways
– Direct transmission: An infected person frequently touch their nose,
mouth and conjunctiva
– Virus aerosols: Sneezing, coughing and speaking all produce aerosols
– A good sneeze can generate up to 20,000 aerosols
11
Cont…
– Indirect transmission: Transfer through contaminated objects
called fomite, such as toys, doorknobs, light switches etc
12
Pathophysiology
– Influenza virus infect both upper and lower respiratory tracts
– Sialic acid on epithelial cells are the receptors
– Typically incubation period of influenza is 24 hours to 4 days
– Children are more affected than adults
13 Influenza infected lungs
Symptoms
– Fever may be 100°F to 104°F
– Headache
– Dry nose
– Runny nose
– Sore throat
– Fatigue(tiredness)
– Body aches
14
Diagnosis
– Viral culture
– Serology
– Rapid antigen testing
– RT-PCR
– Immunofluorescence assays
– Rapid molecular assays
15
Treatment
– It includes a range of medications and therapies:
Antiviral drugs
– 1) Oseltamivir: Serve as competitive inhibitor of the activity of
viral neuraminidase enzyme in sialic acid
– 2) Zanamivir: it binds to the active site of the neuraminidase
proteins, make the influenza virus unable to escape its host cell
16
Cont…
– 3) M2 inhibitor: the antiviral drug such as Amantadine and
Rimantadine block a viral ion channel(M2 protein)
– Prevent the virus from infecting cells
17
Prevention
– Get vaccinated each year
– Washing hands
– Covering nose and mouth while coughing or sneezing
– Avoid touching nose, mouth and eyes
– Limited contact with sick people
18
Vaccination
– Annual vaccination for a given year
– Each seasonal vaccine contains three or four viral-strain antigens:
• Type A H1N1
• Type B H3N2
• Type B strains
19
Cont…
– CDC said that flu vaccine is 61 effective and recommends flu
vaccination for all over 6 months
– Side effect:
– No severe side-effect of influenza vaccine
– Sometimes allergic reaction and increased cough, runny nose,
asthma are identified in children
20
THANK YOU
1

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influenza virus

  • 1. INFLUENZA VIRUS PRESENTED BY NAVEED UR REHMAN BS, MICROBIOLOGY
  • 2. – Influenza virus is an infectious agent that causes a respiratory tract infection – It cause diseases in vertebrates – It is an antisense single stranded RNA virus – Influenza virus has three main types i.e. Influenza A, Influenza B, influenza C INTRODUCTION 2
  • 3. Classification – Group: Group V ((-)ssRNA – Family: Orthomyxoviridae – Genus: Influenza virus – Species: Influenza A, Influenza B, Influenza C 3
  • 4. Epidemiology – The epidemiology of influenza although unpredictable – Influenza outbreaks are known to occur in three patterns: – Pandemic every 30 to 40 years, with high mortality – Epidemics much more frequently, with lower mortality 4
  • 5. Morphology – Influenza type A, B and C are similar in structure – These are roughly spherical of 80-120nm in dimeter – Type C may occur as filamentous – Outer layer is lipid membrane Morphology of influenza virus 5
  • 6. Cont… – There are two types of projections: hemagglutinin (HA) spikes and neuraminidase (NA) spikes – The HA spikes, of which there are about 500 on each virus present – The NA spikes, of which there are about 100 per virus – These spikes are composed of glycoproteins 6
  • 7. Cont… – NA differs from the HA spikes in appearance and function – Viral strains are identified by variation in the HA and NA antigens – The different forms of the antigens are assigned numbers – For example HI, H2, H3, N1, and N2 – There are 16 subtypes of HA and 9 of NA 7
  • 8. Cont… – Complete genome of influenza is segmented into 8 fragments – Influenza C has 7 fragments of genome – Genomic size is about 13.5 bp 8
  • 10. Antigenic shift – Caused by exchange of genetic materials(RNA) – New strains generate – Results in pandemics – For example, Asian flu by H2N2 subtype in 1958-1959 – Only occur in influenza type A 9
  • 11. Transmission – Influenza can spread in three main ways – Direct transmission: An infected person frequently touch their nose, mouth and conjunctiva – Virus aerosols: Sneezing, coughing and speaking all produce aerosols – A good sneeze can generate up to 20,000 aerosols 11
  • 12. Cont… – Indirect transmission: Transfer through contaminated objects called fomite, such as toys, doorknobs, light switches etc 12
  • 13. Pathophysiology – Influenza virus infect both upper and lower respiratory tracts – Sialic acid on epithelial cells are the receptors – Typically incubation period of influenza is 24 hours to 4 days – Children are more affected than adults 13 Influenza infected lungs
  • 14. Symptoms – Fever may be 100°F to 104°F – Headache – Dry nose – Runny nose – Sore throat – Fatigue(tiredness) – Body aches 14
  • 15. Diagnosis – Viral culture – Serology – Rapid antigen testing – RT-PCR – Immunofluorescence assays – Rapid molecular assays 15
  • 16. Treatment – It includes a range of medications and therapies: Antiviral drugs – 1) Oseltamivir: Serve as competitive inhibitor of the activity of viral neuraminidase enzyme in sialic acid – 2) Zanamivir: it binds to the active site of the neuraminidase proteins, make the influenza virus unable to escape its host cell 16
  • 17. Cont… – 3) M2 inhibitor: the antiviral drug such as Amantadine and Rimantadine block a viral ion channel(M2 protein) – Prevent the virus from infecting cells 17
  • 18. Prevention – Get vaccinated each year – Washing hands – Covering nose and mouth while coughing or sneezing – Avoid touching nose, mouth and eyes – Limited contact with sick people 18
  • 19. Vaccination – Annual vaccination for a given year – Each seasonal vaccine contains three or four viral-strain antigens: • Type A H1N1 • Type B H3N2 • Type B strains 19
  • 20. Cont… – CDC said that flu vaccine is 61 effective and recommends flu vaccination for all over 6 months – Side effect: – No severe side-effect of influenza vaccine – Sometimes allergic reaction and increased cough, runny nose, asthma are identified in children 20