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Dr, lJ, Satyanarayana
M.Sc,.Ph.D.,F.l.C.,F.A.C.B.
Professor of Biochemistry
Siddhartha Medical Colle g e
(NTR University of Health Sciences)
Vijayawada, 4.P., India
Dr, lJ, Chakrapani
M.B.B,S.,M.S.
BCDCDT(SAn|D ALLTED lPf Ltd.
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Eiochemistrg
First Published : March 1999
Reprinted: 1999
RevisedReprint: August 2000
Reprinted: 2OQO,2001, 2QO2
Second Revised Edition : June 2002
Reprinted: 2003
RevisedReprint: 2004
RevisedReprint: 2005
Third Revised Edition (multicolour) : 2006
Revised Reprint : 2007
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Prefaceto the Third Edition
Theresponseto the first andthe secondeditionsof my book'Biochemistry'(reprintedseveraltimesin
just 6 years)from the studentsandteachersis simplyoverwhelming.I wasfloodedwith highlyappreciative
lettersfrom all cornersof Indiaandabroad!Thisgivesme immensesatisfactionandencouragemLntin this
academicventure.
I havecorrespondedwith manybiochernistryteachers,invitingtheir commentsandopinionsfor further
improvingthe book.Mostof them havebeenkind enoughto offerconstructivesuggestions.I alsovisited
severalcollegesandhadpersonalinteractionwith facultymembersandstudents.Theseexercises,spreadover
the past 6 years,have helpedme to get direct feedbackon my book, besidesrealisingthe additional
requirementsof students.
I havegreatpleasurein presentingthe third editionof my bookwith severalunique/novelfeatures,some
high-lightsof which are listedbelow.
. A thoroughrevisionandupdatingof eachchapterwith latestadvances-
. Multicolouredillustrationsfor a betterunderstandingof chemicalstructuresandbiochemicalreactions.
. Increasein the font sizeof the text for morepleasantandcomfortablereading.
o Incorporationof a newSectionon MolecularBiologyandBiotechnology.
. Additionof ten new chapters-humangenomeproject,genetherapy,bioinformatics,free radicalsand
antioxidants,tissueproteinsandbodyfluids,environmentalbiochemistry,genetics,immunologyetc.
. An improvedorientationand treatmentof humanbiochemistryin healthanddisease.
. Additionof practicalbiochemistryandclinicalbiochemistrylaboratoryin the appendix.
It is true that I representa selectedgroupof individualsauthoringbooks,havingsometime at disposal,
besideshardwork,determinationanddedication.I considermyselfan eternallearneranda regularstudent
of biochemistry.However,it is beyondmy capabilityto keeptrackof theevergrowingadvancesin biochemistry
dueto the exponentialSrowthof the subject.And this makesme nervous,wheneverI think of revisingthe
book.I honestlyadmitthat I haveto dependon maturereadersfor subsequenteditionsof this book.
AN INVITATION TO READERS
It is not all the time possiblefor me to meetthe readersindividuallyandgettheir feedback,despitemy
ferventwish.Of course,I dowrite to somepeoplepersonaliyseekingtheir opinions.However,I wishto have
the commentsandsuggestionsof eachoneof the readersof my book.I sincerelyinvitethe readersto feelfree
andwrite to me expressingtheir frank opinions,criticalcommentsandconstructivesuggestions.
DT.U. SATYANARAYANA
trl
I owea deepdebtof gratitudeto my parents,the lateSri U.VenkataSubbaiah,andSmt. Vajramma,for
cultivatingin me the habitof earlyrising.Thewriting of this bookwouldneverhavebeenpossiblewithout
this healthyhabit.I am gratefulto Dr. B. S.NarasingaRao(formerDirector,NationalInstituteof Nutrition,
Hyderabad)for discipliningmy professionallife, andto my eldestbrother Dr. U. Gudaru(formerProfessorof
PowerSystems,WalchandCollegeof Engineering,Sangli)for discipliningmy personallife.
My elder son, U. Chakrapani(MBBS)deservesa specialplacein this book. He madea significant
contributionat everystageof its preparation-writing, verification,proof-readingandwhat not. I hadthe rare
privilegeof teachingmy sonashehappenedto bea studentof our college.Anda majorpartof this bookwas
writtenwhilehewaslearningbiochemistry.Thus,hewasthe firstpersonto learnthesubjectof biochemistry
from my handwrittenmanuscript.Thestudent-teacherrelation(ratherthan the father-son)hashelpedme in
receivinSlconstantfeedbackfrom him and restructurethe book in a way an undergraduatestudentwould
expecta biochemistrytextbookto be.
Next,I thankDr. G.PitcheswaraRao(formerProfessorof Anatomy,SMC,Vijayawada)for his constructive
criticism and advice,and Dr. B. Sivakumar(Director,NationalInstituteof Nutrition, Hyderabad)for his
helpful sugi5lestionson the microfigures.I am gratefulto my nephew,Mr. U. SrinivasaRao,for helping me
in drawingsomefigures.
Last but not least,I thank my wife Krishna Kumari and my youngerson,Amrutpani,without whose
cooperationand encouragementthis book could never have beenwritten. The manuscriptwas carefully
nurturedlike a newborn babyandthe bookhasnow becomea full-pledgedmemberof our family.
ACKNOWLEDGEMENTSTO THE THIRD EDITION
I amindebtedto a largenumberof friends,pen-friendsandstudentswhohelpedmeto reviseandimprove
the qualityof this book.I haveindividuallyandpersonallythankedall of them (whonumbera fewhundreds!).
I onceagainexpressmy gratitudeto them.
I thank my friend and colleague,Mr. M.S.T.JaganMohan,who has helpedme with his frequent
interactionsto improvethe book,andmakeit morestudent-friendly.I wouldlike to placeon recordmy deep
senseof appreciationto my post-graduate(M.D.)students,Dr. (Mrs.)U.B.VijayaLakshmiandDr. (Mrs.)Vidya
DesaiSripad,whoseperiodicalacademicinteractionandfeedbackhavecontributedto the improvementof the
biomedicaVclinicalaspectsin somechapters.I acknowledgethe helpof my friend,Dr. P.Ramanujam(Reader
in English,AndhraLoyolaCollege,Vijayawada)for his helpandencouragementin revisingthe book.
I expressmy gratitudeto Mr. ArunabhaSen, Director,Books & Allied (P) Ltd. Kolkata,for his
wholeheartedsupportand constantencouragementin revisingthe bookin multicolour,and takingall the
painsto bring it out to my satisfaction.I thank Mr. ShyamalBhattacharyafor his excellentpage-makingand
graphics-workin the book.I am indebtedto Mr. PrasenjitHalderfor the coverdesignof this book.
I thank my wife, Krishna Kumari, and my younger son, Amrutpani, for their constantsupport and
encouragement.I am grateful to UppalaAuthor-PublisherInterlinks, Vijayawada,for sponsoringand
supportingme to bring out this edition.
Iiii]
DT.U. SAIYANARAYANA
Biochemistry
The term Biochemistrywas introducedby Carl Neubergin 1903.Biochemistrybroadlydealswith the
chemistrvof life and living processes.Thereis no exaggerationin the statement,'Thescopeof biochemistrg
is asuastaslilb itself!' Everyaspectof life-birth,growth,reproduction,aginganddeath,involvesbiochemistry.
For that matter,everymovementof life is packedwith hundredsof biochemicalreactions.Biochemistryis the
mostrapidlydevelopingandmostinnovativesubjectin medicine.Thisbecomesevidentfromthe factthat over
the years,the major shareof NobelPrizesearmarkedfor Medicineand Physiologyhasgoneto researchers
engagedir: biochemistry.
The disciplineof biochemistryservesas a torch light to trace the intricate complexicitiesof biology,
besidesunravellingthe chemicalmysteriesof life.Biochemicalresearchhasamplydemonstratedthat all living
thingsarecloselyrelatedat the molecularlevel.Thusbiochemistryis the subjectof unity in the diversified
living kingdom.
Advancesin biochemistryhavetremendousimpacton humanwelfare,andhavelargelybenefitedmankind
and their living styles.Theseincludethe applicationof biochernistryin the laboratoryfor the diagnosisof
diseases.the products(insulin,interferon,€rowthhormoneetc.)obtainedfrom geneticengiineering,andthe
possibleuseof genetherapyin the nearfuture.
0rganizationof the Book
This texthook,comprising43 chapters,is orgianizedinto serrensecl:ionsin the heirarchicalorder of
learninSbiochemistry.
. SectionI dealswith the chemicalconstituentsof life-carbohydrates,lipids,proteinsandaminoacids,
nucleicacidsandenzymes.
. SectionII physiologicalchemistryincludesdigestionandahsorption,plasmaproteins,hemoglobinand
prophyrins,andbiologicaloxidation.
. SectionIII incorporatesall the metabolisms(carbohydrates,lipids,aminoacids,nucleotides,minerals)
. Section[V covershormones,organfunctiontests,water,electrolyteandacid-basebalance,tissueproteins
andtrodi'fluids,andnutrition.
. SectionV is exclusivelydevotedto molecularbiologyandbiotechnology(DNA-replication,recombination,
ar"lnrepair,transcriptionandtranslation,regulationof geneexpression,recombinantDNAandbiotechnology)
. SectionVI givesrelevantinformation on current topics such a^shuman genomeproject,genetherapy,
bioirrtormatics,prostaglandins,diabetes,cancer,AIDSetc.
. Section VII dealswith the basic aspectsfor learning and understandingbiochemistry (bioorganic
chenristry',hiophysicalchemistrytoolsof biochemistry,genetics,immunology).
Each chapterin this book is carefully craftedwith colour illustrations, headingsand subheadingsto
facilitatequickunderstanding.Theimportantapplicationsof biochemistryto humanhealthanddiseaseareput
togetherasbiomedical/clinicalconcepts.Iconsare usedat appropriateplacesto serveas 'landmarks'.
The origins of biochemicalwords, confusablesin biochemistry,practicalbiochemistryand clinical
biochemistrylaboratory,givenin the appendixare novelfeatures.
Thebriokis so organizedasto equipthe readerswith a comprehensiveknowledgeof biochemistry.
Iiu]
Gontents
SECTION ONE
ChemicalConstituentsof Life
1 > Biomoleculesandthecell
2 > Carbohydrates
3 > Lioids
4 > Proteinsandaminoacids
5 > Nucleicacidsandnucleotides
6 > Enzymes
7 > Vitamins
SECTION TWO
PhysiologicalBiochemistry
B > Digestionandabsorption
9 > Plasmaoroteins
10 > Hemoglobinandporphyrins
11 > Biologicaloxidation
SECTION THBEE
q3 > Metabolismofcarbohydrates
*4 > Metabolismoflioids
F-, Metabolismofaminoacids
16 > Int6grationofmetabolism
17 > Metabolismofnucleotides
1B > Mineralmetabolism
SECTION FOUR
ClinicalBiochemistrvand Nutrition
19 > Hormones
20 > Organfunctiontests
21 > Water,electrolyteand
acid-basebqlance
22 > Tissueproteinsandbodyfluids
23 > Nutrition-
SECTION FIVE
MolecularBiologyand Biotechnology
24 > DNA-replication,recombinationandrepair523
25 > Transcriotionandtranslation 542
26 > Regulationofgeneexpression 566
27 b RecombinantDNAandbiotechnology578
sEcTtcN stx
Current Topics
28 > Humangenomeproject 619
29 > Genetherapy 625
30 F Bioinformatics 634
31 p 'lvletabolismofxenobiotics(detoxification)638
32 >' Prostaglandinsandrelatedcompounds644
33 > Biologicalmembranesandtransport 650
34 b Freeradicalsandantioxidants 655
35 > Environmentalbiochemistry 662
36 l" Insulin,glucosehomeostasis,
3
9
28
43
69
85
176
165
182
196
221 anddiabetesmellitus
Cancer
669
58s37>
38> Acquiredimmunodeficiency
syndrome(AIDS) 695
241
244
285
330.
380
387
403
427
453
SECTION SEVEN
Basicsto LearnBiochemistrv
39 > Introductiontobioorganicchemistry
40 > Overviewofbiophysicalchemistry
41 > Toolsofbiochemistrv
42 > lmmunology
43 > Genetics
APPENDICES
AnswerstoSelf-assessmenlExercises
I Abbreviationsusedinthisbook'
ll Greekalphabets
lll Originsolimportantbiochemicalwords
lV Commonconfusablesinbiochemistry
V Practicalbiochemistry-principles
Vl Clinicalbiochemistrylaboratory
INEEX
703
708
719
732
737
745
751
756
tJt
760
764
770
773
468
487
502
fi Protuinsand Amino acids 4:
Nucleicacidsand Nucleotides 69
BflomnoXeeutrssaildthsCelll
-l- hu living matter is composedof mainly six
I elements-carbon, hydrogen, oxygenl
nitrogen, phosphorus and sulfur. Theseelements
togetherconstituteabout 90% of the dry weight
of the human body. Severalother functionally
importantelementsare also found in the cells.
Theseinclude Ca, K, Na, Cl, Mg, Fe,Cu, Co, l,
Zn, F, Mo and Se.
earbon-a unique element of life
Carbonis the most predominantand versatile
elementof life. lt possessesa unique propertyto
form infinite number of compounds. This is
attributedto the ability of carbon to form stable
covalentbonds and C-C chains of unlimited
length. lt is estimated that about 90% of
compounds found in living system invariably
contain carbon.
Ghemical molecules of li#e
Life is composed of lifeless chemical
molecules. A single cell of the bacterium,
Escherichiacoli containsabout 6.000 different
organiccompounds.lt is believedthat man may
contain about 100,000 different types of
moleculesalthough only a few of them have
been characterized.
Sornpiex *riomoleeules
The organiccompoundssuchasamino acids,
nucleotidesand monosaccharidesserve as the
monomeric unitsor building blocksof complex
biomolecules-proteins,nucleicacids(DNA and
RNA) and polysaccharides,respectively.The
important biomolecules(macromolecules)with
their respective building blocks and major
functions are given in Table 1.1. As regards
lipids, it may be noted that they are not
biopolymers in a strict sense,but majority of
them contain fatty acids.
Structural heirarehy off asn organisnl
The macromolecules(proteins,Iipids,nucleic
acidsand polysaccharides)form supramolecular
assemblies(e.g. membranes)which in turn
organize into organelles,cells, tissues,organs
and finally the whole organism.
3
BIOCHEMISTFIY
Biomolecule Buildingblock
(repeatingunit)
Major functions
1. Protein Aminoacids
2. Deoxyribonucleicacid(DNA) Deoxyribonucleotides
Ribonucleotides3. Ribonucleicacid(RNA)
4. Polysaccharide(glycogen)Monosaccharides(glucose)
Fundamentalbasisofstructureand
functionofcell(staticanddynamicfunctions).
fl_eq_o_sitoryo.l.!9199iFryi{9l1llgt
Essentiallyrequiredlorproteinbiosynthesis.
Storageformofenergytomeetshortterm
demands.
5. Lipid Fattyacids,glycerol Storagetormofenergytomeetlongterm
demands;structuralcomponentsofmembranes.
Chem*ca! composition of man
The chemicalcompositionof a normal man,
weighing 65 kg, is given in Table 1.2.Water is
the solventof life and contributesto more than
60"h of the weight. This is followed by protein
(mostlyin muscle)and lipid (mostlyin adipose
tissue).The carbohydratecontent is rather low
which is in the form of glycogen.
The cell is the structuraland functional unit
of life. ft may be also regardedas the basic unit
of hiological activity.
The concept of cell originated from the
contributionsof Schleidenand Schwann(1838).
However, it was only after 1940, the
complexitiesof cell structurewere exposed.
Constituent Percent(7") Weight (kg)
Prokaryotic and eukaryotic cells
The cells of the living kingdom may be
divided into two categories
1. Prokaryotes(Creek: pro - before;karyon-
nucleus)lacka well definednucleusand possess
relatively simple structure.These include the
variousbacteria.
2. Eukaryotes(Greek: eu-true; karyon-
nucleus)possessa well definednucleusand are
more complex in their structureand function.
The higher organisms(animalsand plants)are
composedof eukaryoticcells.
A comparisonof the characteristicsbetween
prokaryotesand eukaryotesis listedin Table 1.3.
The human body is composedof about 1014
cells.There are about 250 typesof specialized
cel{s in- the human body'G.g. erythrocytes,
nerve-cells, muscle cells, B cells of pancreas.
An eukaryoticcell is generally10 to 100 pm
in diameter. A diagrammatic representation
of a typical rat liver cell is depicted in
Fig.I.t.
The plant cell differsfrom an animalcell by
possessinga rigid cell wall (mostlycomposedof
cellulose)and chloroplasts.The latter are the
sitesof photosynthesis.
Water
Protein
Lipid
Carbohydrate
Minerals
61.6
17.0
13.8
6.1
40
11
I
'|
4
Chapter 1 : BIOMOLECULESAND THE CELL
Characteristic Prokaryotic cell Eukaryoticcell
1. Size Small(generally1-10pm) Large(generally10-100pm)
2. Cellmembrane Cellisenvelopedbyaflexibleplasmamembrane
Distinctorganellesarefound
(e.9.mitochondria,nucleus,lysosomes)
3. Sub-cellular
organelles
4, Nucleus Notwelldefined;DNAisfound
asnucleoid,histonesareabsent
Nucleusiswelldefined,surroundedbya
membrane:DNAisassociatedwithhistones
5. Energymetabolism Mitochondriaabsent,enzymesof
energymetabolismboundto
Enzymesolenergymetabolismarelocated
inmitochondria
membrane
6. Celldivision
7. Cytoplasm
Usuallyfissionandnomitosis Mitosis
0rganellesandcytoskeleton
absent
Containsorganellesandcytoskeleton
(anetworkoftubulesandfilaments)
The cell consistsof well definedsubcellular
organelles,envelopedby a plasma membrane.
By differential centrifugation of tissue
homogenate, it is possible to isolate each
cellular organelle in a relatively pure form
(Refer Chapter 41). The distribution of major
enzymes and metabolic pathways in different
cellular organelles is given in the chapter
on enzymes (Refer Fig.6.6). The subcellular
organellesare briefly describedin the following
pages.
Nucleus
Nucleus is the largest cellular organelle,
surroundedbv a double membrane nuclear
envelope.The outer membraneis continuous
with the membranesof endoplasmicreticulum.
At certainintervals,the two nuclearmembranes
have nuclearporeswith a diameterof about 90
nm. Theseporespermit the free passageof the
products synthesizedin the nucleus into the
surrounding cytoplasm.
Roughendoplasmicreticulum
Golgiapparatus
Lysosome
Mitochondrion
Plasmamembrane
Vacuole
Ribosomes
Peroxisome
Cytoskeleton
Cytosol
Coatedpits
Ftg. 1.1: Diagrammaticrepresentationof a nt liverell.
BIOCHEMISTF|Y
Nucleus contains DNA, the repository of
genetic information. Eukaryotic DNA is
associatedwith basic protein (histones)in the
ratio of 1 : 1, to form nucleosomes.An assembly
of nucleosomesconstituteschromatin fibres of
chromosomes(Creek'.chroma - colour; soma-
body). Thus, a single human chromosomeis
comoosedof abouta million nucleosomes.The
number of chromosomes is a characteristic
feature of the species. Humans have 46
chromosomes,compactlypackedin the nucleus.
The nucleusof the eukaryoticcell containsa
dense bodv known as nucleolus.lt is rich in
RNA, particularlythe ribosomal RNA which
entersthe cytosolthrough nuclearpores.
The ground materialof the nucleus is often
referredto as nucleoplasm.lt is rich in enzymes
such as DNA polymerases and RNA
polymerases.To the surpriseof biochemists,the
enzymes of glycolysis,citric acid cycle and
hexose monophosphateshunt have also been
detectedin the nucleoplasm.
Mitochondria
The mitochondria (Creek'. mitos- thread;
chondros- granule) are the centres for the
cellularrespirationand energymetabolism.They
are regarded as the power housesof the cell
with variablesize and shape.Mitochondriaare
rod-like or filamentousbodies, usuallv with
dimensions of 1.0 x 3 pm. About 2,0O0
mitochondria,occupyingabout 1/5thof the total
cell volume,are presentin a typicalcell.
The mitochondriaare comoosedof a double
membrane system. The outer membrane is
smooth and completelyenvelopsthe organelle.
The inner membrane is folded to form cristae
(Latin- crests)which occupy a larger surface
area. The internal chamber of mitochondriais
referred to as matrix or mitosol.
The componentsof electron transportchain
and oxidative phosphorylation (flavoprotein,
cytochromesb, c1, C, a and a3 and coupling
factors)are buried in the inner mitochondrial
membrane.The matrixcontainsseveralenzvmes
concerned with the energy metabolism of
carbohydrates,lipidsandaminoacids(e.g.,citric
acid cycle, p-oxidation).The matrix enzymes
also parlicipate in the synthesisof heme and
urea. Mitochondria are the principal producers
of ATP in the aerobic cells. ATP, the energy
currency,generatedin mitochondriais exported
to all partsof the cell to provideenergyfor the
cellularwork.
The mitochondrialmatrixcontainsa circular
double stranded DNA (mtDNA), RNA and
ribosomes.Thus,the mitochondriaareequipped
with an independent protein synthesizing
machinery.It is estimatedthat about 10% of the
mitochondrial oroteins are produced in the
mitochondria.
The structureand functionsof mitochondria
closely resemble prokaryotic cells. lt is
hypothesizedthat mitochondria have evolved
from aerobicbacteria.Further,it is believedthat
duringevolution,the aerobicbacteriadeveloped
a symbiotic relationship with primordial
anaerobiceukaryoticcellsthat ultimatelyled to
the arrival of aerobiceukaryotes.
Endoplasmic reticulum
The network of membraneenclosedspaces
that extends throughout the cytoplasm
constitutesendoplasmicreticulum(ER).Someof
these thread-like structuresextend from the
nuclearporesto the plasmamembrane.
A large portion of the ER is studded with
ribosomesto give a granularappearancewhich
is referred ro as rough endoplasmic reticulum.
Ribosomes are the factories of protein
biosynthesis. During the process of cell
fractionation,roughERisdisruptedto form small
vesiclesknown as microsomes.It may be noted
that microsomesas such do not occur in the
cell.
The smoothendoplasmicreticulumdoes not
containribosomes.lt is involvedin the synthesis
of lipids (triacylglycerols,phospholipids,sterols)
and metabolismof drugs,besidessupplyingCa'?.
for the cellularfunctions.
Golgi apparats,r$
Eukaryoticcells contain a unique clusterof
membrane vesicles known as dictyosomes
Chapter 1 : BIOMOLECULESAND THE CELL
which, in turn, constituteColgi apparatus(or
Colgi complex).The newly synthesizedproteins
are handed over to the Colgi apparatuswhich
catalysethe addition of carbohydrates,lipids or
sulfatemoietiesto the proteins.Thesechemical
modificationsare necessaryfor the transportof
proteinsacrossthe plasmamembrane.
Certainproteinsand enzymesareenclosedin
membrane vesicles of Colgi apparatusand
secreted from the cell after the appropriate
signals.The digestiveenzymesof pancreasare
oroducedin this fashion.
Colgi apparatusare also involved in the
membrane synthesis, particularly for the
formation of intracellular organelles (e.g.
peroxisomes,lysosomes).
Lysosornes
Lysosomesare sphericalvesiclesenveloped
by a singlemembrane.Lysosomesare regarded
as the digestivetract of the cell, sincethey are
actively involved in digestion of cellular
substances-namely proteins, lipids, carbo-
hydratesand nucleic acids.Lysosomalenzymes
are categorizedas hydrolases.Theseinclude the
following enzymes(with substratein brackets)
a-C lucosidase(glycogen)
Cathepsins(proteins)
Lipases(lipids)
Ribonucleases(RNA)
The pH of the lysosomalmatrixis moreacidic
(pH< 5) than the cytosol (pH-7) and this
facilitatesthe degradationof differentcompounds.
The lysosomal enzymes are responsiblefor
maintaining the cellular compounds in a dynamic
stafe, by their degradationand recycling.The
degradedproductsleavethe lysosomes,usually
by diffusion, for reutilization by the cell.
Sometimes,however,certain residualproducts,
rich in lipidsand proteins,collectivelyknown as
Iipofuscinaccumulatein the cell. Lipofuscinis
the agepigmentor wear and tearpigmentwhich
has been implicatedin ageingprocess.
The digestiveenzymesof cellularcompounds
are confinedto the lvsosomesin the bestinterest
of the cell. Escapeof theseenzymesinto cytosol
will destroythe functionalmacromoleculesof tne
cell and result in many complications.The
occurrence of several diseases(e.g. arthritis,
musclediseases,allergicdisorders)hasbeenpartly
attributedto the releaseof lysosomalenzymes.
Feroxisomes
Peroxisomes,also known as microbodies, are
single membranecellularorganelles.They are
spherical or oval in shape and contain the
enzyme catalase.Catalaseprotectsthe cell from
the toxic effectsof HrO, by converting it to HrO
and Or. Peroxisomesare also involved in tne
oxidation of long chain fatty acids (> C,s),and
synthesisof plasmalogensand glycolipids.Plants
contain glyoxysomes, a specialized type of
BTOMED|eAL/ CLINICAL COIUCEPTS
A liuing cell is a true representotiueof life with its own organizotionand specialized
lunctions.
Accumulotion oJ lipofuscin,a pigment rich in lipids and proteins, in the cell hasbeen
implicated in ogeing process.
Leokageof lysosomalenzymesinto the cell degrodesseuerolfunctional macromolecules
and this may leod to certain disorders (e.9. arthritis).
rq Zellweger syndrome is a rare diseose characterized by the absence of functional
peroxisomes.
E}IOCHEMISTF|Y
peroxisomes, which are involved in the
glyoxylate pathway.
Peroxisome biogenesisdisorders (PBDs), are
a Broup of rare diseasesinvolving the enzyme
activities of peroxisomes. The biochemical
abnormalitiesassociatedwith PBDs incluoe
increasedlevelsof very long chain fatty acids
(C2aand C26)and decreasedconcentrationsof
plasmalogens.The most severeform of PBDsis
Zellweger syndrome, a condition characterized
by the absenceof functional peroxisomes.The
victimsof this diseasemav die within one vear
after birth.
{iytosol and cytoskeleton
The cellular matrix is collectively referredto
as cytosol. Cytosol is basicallya compartment
containing several enzymes/ metabolites and
saltsin an aqueousgel like medium.More recent
studies however, indicate that the cytoplasm
actuallycontainsa complex network of protein
filaments, spread throughout, that constitutes
cytoskeleton.The cytoplasmicfilamentsare of
three types- microtubules, actin filaments and
intermediatefilaments.The filamentswhich are
polymers of proteins are responsiblefor the
structure,shapeand organizationof the cell.
INTEGRATIOI{ OF
CELLULAR FUNCTIONS
The eukaryoticcells performa wide rangeof
complex reactionsfunctionsto maintaintissues,
and for the ultimatewell-beingof the whole
organism. For this purpose, the various
intracellularprocessesand biochemicalreactions
are tightly controlledand integrated.Divisionof
a cell intotwo daughtercellsis goodexampleof
the orderlyoccurrenceof an integratedseriesof
cellularreactions.
Apoptosisis the programmedcell death or
cell suicide. This occurs when the cell has
fulfilled its biologicalfunctions.Apoptosismay
be regardedas a natural cell deathand it differs
from the cell death caused by injury due to
radiation,anoxiaetc. Programmedcell death is
a highly regulatedprocess.
1.
2.
3.
Life is composed ol lifeless chemical molecules. The complex biomolecules, proteins,
nucleic ocids (DNA and RNA), polysaccharidesand lipids are formed by the monomeric
units amino acids,nucleotides,monosaccharidesand fotty acids,respectluely.
The cell is the structuroland functional unit of life. The eukoryoticcell consisfsof well
det'inedsubcellulororganelles,enuelopedin a plasma membrane.
The nucleus contoinsDNA, the repositoryol genetic int'ormation.DNA, in association
with proteins (histones),forms nucleosomeswhich,in turn, make up the chromosomes.
The mitochondria qre the centresfor energymetobolism. Theyare the principalproducers
of ATP which is exported to all parts of the cell to ptouide energylor cellular work.
Endoplosmic reticulum (ER) ts the network of membrane enclosed spocesthat extends
throughout the cytoplosm. ER studded with ribosomes, the factorles of protein
biosynfhesis, ts relerred to as rough ER. Golgi opparatus sre a cluster of membrane
uesiclesto uthich the newlg synthesizedproteins are handed ouer for t'urther processing
ond export.
Lysosomesare the digestiue bodiesol the cell, actiuely involued in the degradotion of
cellular compounds. Peroxisomescontoln the enzymecatalosethat protects the cell lrom
the toxic elfects of HrOr. The cellular ground motrix is referred to as cytosol which, in
fact, is composed of a network ot' protein t'ilaments, the cytoskeleton.
Theeukaryoticcellsperform a widerangeof complex lunctionsin a well coordinatedand
integrated fashion. Apoptosis is the processol programmed cell death or cell suicide.
5.
6.
7.
1^ arbohydratesare the most abundantorganic
- molecules in nature. They are primarily
composedof the elementscarbon, hydrogen and
oxygen.The name carbohydrateliterallymeans
'hydratesof carbon'.Someof the carbohydrates
possessthe empiricalformula (C.H2O)nwhere
n 3 3, satisfyingthat thesecarbohydratesare in
fact carbonhydrates.However,thereare several
non-carbohydratecompounds(e.g. acetic acid,
C2HaO2;lacticacid,C3H6O3)which alsoappear
as hydratesof carbon. Further, some of the
genuine carbohydrates (e.g. rhamnohexose,
C6H12O5ideoxyribose,C5H16Oa)do not satisfy
the generalformula.Hencecarbohydratescannot
be alwaysconsideredas hydratesof carbon.
Carbohydrates may be defined as
polyhydroxyaldehydes or ketones or compounds
which produce them on hydrolysis. The term
'sugar' is applied to carbohydratessoluble in
water and sweet to taste.
#-ur*c;tEerEsof earbohydrates
Carbohydratesparticipatein a wide rangeof
functions
1. Theyarethe mostabundantdietarysource
of energy (a Cal/S)for all organisms.
2. Carbohydratesare precursorsfor many
organic compounds(fats,amino acids).
3. Carbohydrates(asglycoproteinsand glyco-
lipids) participate in the structure of cell
membraneand cellular functionssuch as cell
growth, adhesionand fertilization.
4. They are structuralcomponentsof many
organisms.Theseincludethe fiber (cellulose)of
plants,exoskeletonof some insectsand the cell
wall of microorganisms.
5. Carbohydratesalso serve as the storage
form of energy(glycogen)to meetthe immediate
energydemandsof the body.
CLASSIFICATION
OF GARBOHYDRATES
Carbohydrates are often referred to as
saccharides (Greek: sakcharon-sugar).They
are broadlyclassifiedinto three major groups-
monosaccharides, oligosaccharides and
polysaccharides.This categorizationis basedon
t0 BIOCHEMISTRY
Monosaccharides(empiricalformula) AIdose Ketose
Trioses(CgHoOg)
Telroses(C+HoO+)
Pentoses(CsHroOs)
Hexoses(CoHrzOo)
Heptoses(CzHr+Oz)
Glyceraldehyde
Erythrose
Ribose
Glucose
Glucoheptose
Dihydroxyacetone
Erythrulose
Ribulose
Fructose
Sedoheptulose
the number of sugar units. Mono- and oligo-
saccharidesare sweet to taste, crystalline in
characterand soluble in water, hence thev are
commonly known as sugars.
FJtonosaccharides
Monosaccharides(Greek: mono-one)are the
simplestgroup of carbohydratesand are often
referred to as simple sugars.They have the
generalformula Cn(H20)n,and they cannot be
further hydrolysed.The monosaccharidesare
divided into differentcategories,based on the
functionalgroupandthe numberof carbonatoms
Aldoses : When the functional group in
IH 
monosaccharidesis an aldehydel-C:oi, ,h"u
are known as aldoses e.g. glyceraldehyde,
glucose.
Ketoses: When the functionalgroup is a keto
lt 
-C:O.l group, they are referredto as ketoses
e.g. dihydroxyacetone,fructose.
Basedon the number of carbon atoms,the
monosaccharidesare regarded as trioses (3C),
tetroses (4C), pentoses (5C), hexoses (6C) and
heptoses(7C).Thesetermsalongwith functional
groupsare usedwhile namingmonosaccharides.
For instance, glucose is an aldohexose while
fructose is a ketohexose(Table 2,1).
Thecommonmonosaccharidesand disaccha-
rides of biological importanceare given in the
Table 2.2.
SSlgosaccharides
Oligosaccharides(Creek: oligo-few) contain
2-1O monosaccharidemolecules which are
liberatedon hydrolysis.Basedon the numberof
monosaccharide units present, the oligo-
saccharides are further subdivided to
disaccharides,trisaccharidesetc.
Polysace harides
Polysacchari6ls(Creek:poly-many)are poly-
mers of mondficcharide units with high mole-
cular weight (up to a million).They are usually
tasteless(non-sugars)and form colloids with
water. The polysaccharidesare of two types-
homopolysaccharidesand heteropolysaccharides.
Stereoisomerismis an importantcharacterof
monosaccharides. Stereoisomers are the
compounds that have the same structural
formulaebut differ in their spatialconfiguration.
A carbon is said to be asymmetric when it is
attached to four different atoms or groups. Ihe
number of asymmetric carbon atoms (n)
determines the possible isomers of a given
compound which is equal to 2n. Clucose
contains4 asymmetriccarbons,and thus has 16
tsomers.
Glyeeraldehyde
-tfu e ref erqlrt*e cff rb$hyd$'er'&€3
Clyceraldehyde(triose)is the simplestmono-
saccharidewith one asymmetriccarbonatom. lt
existsastwo stereoisomersand hasbeenchosen
as the referencecarbohydrateio representthe
structureof all other carbohvdrates.
Ghapter 2 : CARBOHYDRATES 11
Trioses
Glyceraldehyde
Dihydroxyacetone
Tetroses
D-Erythrose
Foundincellsasphosphate
Foundincellsasphosphate
i Widespread
I Widespreadasaconstituentof
I RNAandnucleotides
i AsaconstituentofDNA
: Producedduringmetabolism
i Asaconstituentofglycoproteins
i anogums
i ls anintermediateinuronicacidpathway
i Heartmuscle
i --. --. -- --.. ---.. -.. -. --.
Asaconstituentolpolysaccharides
(starch,glycogen,cellulose)and
disaccharides(maltose,lactose,
sucrose).Alsofoundinfruits
Asaconstituentoflactose
(milksugar)
Foundinplantpolysaccharides
andanimalglycoproteins
Fruitsandhoney,asaconstituent
ofsucroseandinulin
Foundinolants
i Glyceraldehyde3-phosphateisanintermediate
i inglycolysis
i ttst-pnosphateisanintermediateinglycolysis
----t------..-..-.--...---
ForthestructureofRNAandnucleotide
coenzymes(ATP,NAD+,NADP+)
ForthestructureolDNA
Itisanimportantmetaboliteinhexose
monophosphateshunt
Involvedinthefunctionofglycoproteins
Excretedinurineinessenlialpentosuria
Asaconstituentollvxollavinofheartmuscle
The'sugarfuel'oflife;excretedinurinein
diabetes.Structuralunitofcelluloseinplants
Convertedtoglucose,failureleadsto
galactosemia
Forthestructureofpolysaccharides
Itsphosphatesareintermediatesofglycolysis
Its7-phosphateisanintermediateinhexose
monophosphateshunt,andinphotosynthesis
Pentoses
D-Ribose
D-Deoxyribose
D-Ribulose
D-Xylose
L-Xylulose
D-Lyxose
Hexoses
D-Glucose
D-Galactose
D-Mannose
D-Fructose
Heptoses
D-Sedoheptulose
Disaccharides Occurrence Biochemical importance
Sucrose
Lactose
Asaconstituentofcanesugarand
beetsugar,pineapple
Milksugar
Productofstarchhydrolysis,
occursingerminatingseeds
Mostcommonlyusedtablesugarsupplying
calories
Exclusivecarbohydratesourcetobreastfed
infants.Lactasedeficiency(lactoseintolerance)
leadstodianheaandflatulence
Animportantintermediateinlhedigestionof
starch
Maltose
12 E}IOCHEMISTFIY
H-C:O
I
H-C-OH
cH2oH
D-Glyceraldehyde
H-C:O
HO-C-H
cH2oH
L-Glyceraldehyde
H-C:O
I
HO-C-H
H-C-OH
I
HO-C-H
HO-C-H
cH2oH
L-Glucose
Fig.2.1 : DandL- formsof glucosecomparedwith
D and L- glyceraldehydes (the reference carbohydrate).
D" and L-isomers
The D and L isomersare mirror imagesof
each other. The spatialorientationof -H and
-OH groups on the carbon atom (Cs for
glucose)that is adjacentto the terminal primary
alcohol carbon determineswhetherthe sugaris
D- or L-isomer.lf the -OH group is on the right
side,the sugaris of D-series,and if on the left
side, it belongs to L-series.The structuresof
D- and L-glucosebasedon the referencemono-
saccharide, D- and L-glyceraldehyde (glycerose)
are depicted in Fig.2.1.
It may be noted that the naturallyoccurring
monosaccharidesin the mammaliantissuesare
mostlyof D-configuration.Theenzymemachinery
of cells is specific to metaboliseD-seriesof
monosaccharides.
fn the medical practice, the term dextroseis
used for glucosein solution. This is becauseof
the dextrorotatorynature of glucose.
Optlcal activity of sugars
Optical activity is a characteristicfeature of
compounds with asymmetric carbon atom.
When a beam of polarized light is passed
througha solutionof an optical isomer,it will be
rotated either to the right or left. The term
dextrorotatory (+) and levorotatory (-) are used
to compoundsthat respectivelyrotatethe plane
of polarizedlight to the right or to the left.
An optical isomer may be designatedas
D(+), D(-), L(+)and L(-) basedon its structural
relation with glyceraldehyde.lt may be noted
that the D- and L-configurationsof sugarsare
primarily based on the structure of
glyceraldehyde,the optical activitieshowever,
may be different.
Racemicmixture : lf D- and L-isomersare
presentin equal concentration,it is known as
racemicmixtureor DL mixture.Racemicmixture
does not exhibit any optical activity, since the
dextro- and levorotatorv activities cancel each
other.
Configuration of D-aldoses
The configuration of possible D-aldoses
startingfrom D-glyceraldehydeis depicted in
Fig.2.2. This is a representation of Killiani-
Fischersynthesis,by increasingthe chain length
of an aldose,by one carbon at a time. Thus,
startingwith an aldotriose(3C),aldotetroses(4C),
aldopentoses(5C) and aldohexoses(6C) are
formed. Of the 8 aldohexoses,glucose,mannose
and galactoseare the most familiar. Among
these, D-glucose is the only aldose mono-
saccharidethat predominantlyoccurs in nature.
Gonfiguration of D-ketoses
Startingfrom dihydroxyacetone(triose),there
are five keto-sugarswhich are physiologicallr
important.Their structuresare given in Fig,2.3
Epimers
ff two monosaccharides differ from eac-
other in their configuration around a singk
specificcarbon (otherthan anomeric)atom. L*ei
are referred to as epimersto each orher '.Fig,21
For instance, glucoseand galactose are efilwl
with regardto carbon 4 (Ca-epimers- -^:i 's
they differ in the arrangementof -OH g.'ELcr
Ca. Clucose and mannose are epi-'e--' q drl
regardto carbon 2 (C2-epimers).
The interconversionof epimers e
-
I r::r'e
to galactose and vice versai s i - -^,'- a*
H-C:O
I
H-C-OH
I
HO-C-H
I
H-C-OH
I
H-Q-OH
I
cHzoH
D-Glucose
Ghapter 2 : CABBOHYDFATES 13
Aldotriose
(3c)
Aldotetroses
(4c)
cHo
I
HOCH
I Aldo toses
HOCH )
I
HCOH
I
cH2oH
D-Lyxoee
cHo
HOCH
I I Aldo-
HOCH HOCH hexoses
HoCH noCH (6c)
tl
HCOH HCOH
tt
cHzoH cHzoH
D-Galactose D-Talose
'l
t-
cHo
HOCH
I
HCOH
HCOH
cH2oH
D-Arabinose
/
JT
cHo cHo
HCOH HOCH
rl
HOCH HOCH
tl
HCOH HCOH
tl
HCOH HCOH
ll
cH2oH cH2oH
D-Glucose D-Mannose
HCOH
I
HCOH
cH2oH
D-Ribose
/
JT
cHo cHo
tl
HCOH HOCH
HCOH HCOH
tl
HCOH HCOH
tl
HCOH HCOH
ll
cH2oH cH2oH
D-Allose D-Altrose
cHo
HCOH
cHo
I
HCOH
I
HCOH
I
HOCH
I
HCOH
cH2oH
D-Gulose
cHo
I
HCOH
cHo
I
HOCH
I
HCOH
I
HOCH
HCOH
I
cH2oH
D-ldose
cHo
I
HCOH
I
cH2oH
D-Erythrose D.Threooe
cHo
I
HCOH
I
HOCH
I
HCOH
cH2oH
D-Xylose
I
/
/
*+
Fig.2.2 : ThestructuralrelationshipbetweenD-aldosesshownin Fischerprojection.
(TheconfigurationaroundC2(ed) distinguishesthemembersof eachpair).
epimerization, and a group of enzymes-
namely-epimerases catalysethis reaction.
Enantiomers
Enantiomers are a special type of
stereoisomers that are mirror images of
eachother. The two membersare designatedas
D- and L-sugars.Enantiomersof glucose are
depicted in Fig.2.5.
Majority of the sugarsin the higher animals
(includingman) are of D-type (Fig.2.5'1.
The term diastereomersis used to represent
the sfereoisomers that are not mirror imagesof
one another.
For a better understanding
structure, let us consider the
hemiacetals and hemiketals,
producedwhen an aldehydeor a
with alcohol.
of glucose
formation of
respectively
ketone reacts
14 E}IOCHEMISTRY
?H2oH
C:O
I
cH2oH
Dlhydroxyacetone
cH2oH
I
C:O
I
HOCH
HCOH
I
cH2oH
D-Xylulose
cH20H
I
C:O
HCOH
HCOH
I
cH2oH
D-Ribulose
cH2oH
I
C:O
HOCH
I
HCOH
I
HCOH
I
cH2oH
D-Fructose
cH2oH
I
C:O
I
HOCH
I
HCOH
I
HCOH
I
HCOH
I
cH2oH
D-Sedoheptulose
Fig.2.3 : Structuresof ketosesof physiologicalimportance.
,H
nt-C.1^ + R2-oH l- Rr-
LJ
Aldefry<b Alcohol Hemiacetal
The hydroxyl group of monosaccharidescan
react with its own aldehydeor keto functional
group to form hemiacetaland hemiketal.Thus,
the aldehydegroup of glucoseat C1 reactswith
alcohol group at C5 to form two typesof cyclic
hemiacetalsnamely a and B, as depicted in
Fig.2.6. The configuration of glucose is
conveniently represented either by Fischer
formulaeor by Haworth projectionformulae.
Fyranose and furanose structures
Haworth projectionformulaeare depictedby
a six-memberedring pyranose(basedon pyran)
or a five-memberedring furanose (based on
furan).The cyclic formsof glucoseare known as
a-D-glucopyranose and c-D-glucofuranose
(Fig.2.V.
Anomers-nrutarotation
The a and p cyclic forms of D-glucose are
known as anomers.Thev differ from each other
in the configurationonly around C1 known as
anomericcarbon(hemiacetalcarbon).In caseof
o anomer,the -OH group held by anomeric
carbon is on the opposite side of the group
-CH2OH of sugarring. The reverseis true for
B-anomer.The anomersdiffer in certainphysical
and chemical properties.
Mutarotation : The a and p anomers of
glucose have different optical rotations. The
specific optical rotation of a freshly prepared
glucose(c anomer)solutionin water is +112.2o
which gradually changes and attains an
equilibriumwith a constantvalue of +52.7". ln
the presenceof alkali, the decreasein optical
rotation is rapid. The optical rotation of
p-glucose is +18.7o. Mutarotation is defined as
the change in the specific optical rotation
representing the interconversion of u and p
H-C:O
I
H-C-OH
I
HO-C-H
I
HO- C -H
H-C-OH
I
cH2oH
D-Galactose
H-C:O
I
H-C-OH
I
HO-C-H
I
H .C-OH
I
H-C-OH
I
CHzOH
D-Glucose
H-C=O
I
HO-C-H
I
HO-C-H
I
H-C-OH
I
H-C-OH
I
cH2oH
D-Mannose
H
I
C:O
I
f{ c-oH
I
HC-C-H
i-l- c-oH
H-C-OH
I
t"1-c-H
HO
H
O=C
HO_C- H
I
H-C- Cl-i
I
HO-C-H
I
HO-C- Fl
I
H-C- ii
I
OH
Fig.2,4: Structuresof epimers(glucoseand galactose
are Co-epimerswhileglucoseand mannoseare
C2-epimers).
L-Glucose D-Glucose
H9.2.5 : Enantiomers(mirrorimages)ofglucose.
t5
Ghapter 2 : CARB
I
cH20H
o'D'Glucose
(+ 112.2"
fil
H6?H
o-D-GlucoPYranose
1
H-C:O
I
H-C-OH
I
HO-C-H
I
H-C-OH
tc
H-C-OH
I
cH2oH
D-Glucose
(aldehYdeform)
l/A
H6?H
HOH
D-Glucose
(aldehydeform,acYclic)
iHron
ftD-Glucose
(+18.7-)
(B)
HOH
FD-GlucoPYranose
cH20H
forms of D'glucose to an equilihrium mixture'
Mutarotationdepictedin Fig'2'6, is summartzeo
below.
cx-D-Clucose# Equilibriummixture# B-D-Clucose
+ 112.2" + 52.7" + 18.7"
(Specificoptical rotation tctl2p0)
The equilibrium mixture contains 63o/"
p-anomer and 36"/ocl-anomer of glucose with
Fig.2.7: Structurcofglucose-pyranose
andfuranosetorms'
HOH
cr-D-GlucoPYranose
cH20H
t-
H-C-OFi
OH
HOH
cr-D-Glucofuranose
17oopen chainform. ln aqueoussolution'the p
forrn
'i,
more predominant due to its stable
conformation.The cr and p formsof glucoseare
interconvertiblewhich occurs through a linear
form. The latter, as such, is present in a"
insignificantquantitY.
Mutarotation of fructose z Frur'
exhibits mutarotation.ln case or
pyranose ring (six-memberqd'
furanose(five-membered)'o'
is attained.And fruqt'
rotation of -92)2.
Ihe conv'
to levor
':ut" :;r'
on
is kn,
anome'
in alkalir
When gt.
severalhours,
chapter 2 : CAFIBoHYDFATES 15
I
cH2oH
cr-D-Glucose
(+ 112.2")
1
H-C=C)
I
H-C-OH
I
HO-C-H
I
H-C-OH
l5
H-C-OH
cH2oH
D-Glucose
(aldehydeform)
HOH
D-Glucose
(aldehydeform,acyclic)
forms of D-glucose to an equilibrium mixture.
Mutarotationdepictedin Fi9.2.6, is summarized
below.
s-D-Clucose# Equilibriummircture# p-D-Glucose
+ 112.2" + 52.7" + 18.7o
(Specificoptical rotation talf;)
The equilibrium mixture contains 63"/"
p-anomer and 36h cl-anomerof glucosewith
cr-D-Glucopyranose
17oopen chain form. In aqueoussolution,the p
form is more predominant due to its stable
conformation.The s and p formsof glucoseare
interconvertiblewhich occurs through a linear
form. The latter, as such, is present in an
insignificantquantity.
Mutarotation of fructose : Fructose also
exhibits mutarotation.ln case of fructose,the
pyranose ring (six-membered)is converted to
furanose(five-membered)ring,till an equilibrium
is attained.And fructosehas a specificoptical
rotationof -92" at equilibrium.
The conversion of dextrorotatory (+) sucrose
to levorotatory fructose is explained under
inversionof sucrose(seelater in this chapter).
REACTIONS OF MONOSACCHARIDES
Tautomerization or enolization
The processof shiftinga hydrogenatom from
one carbon atom to anotherto produce enediols
is known as tautomerization. Sugarspossessing
anomericcarbon atom undergotautomerization
in alkalinesolutions.
When glucoseis kept in alkalinesolutionfor
severalhours,it undergoesisomerizationto form
HOH
o-D-Glucopyranose pD-Glucopyranose
Fig. 2.6 : Mutarotation of glucose representing a and p anomers (A) Fischer projections (B) Haworth projections.
Fig.2.7 : Structureof glucose-pyranose
and furanoseforms.
20H cH2oH
H
c-D-Glucofuranose
16 BIOCHEMISTFIY
H
n-C-ot
H-C:O (
I
H- -OH HO-(
HO-(
R
Enediol
(common)
Fig.2.8 : Formationof a commonenediolfrom
glucose,fructoseandmannose
{fr,f,o,F|F|lPffi:!lo.t|tfr,ft:PI:Is?Iboncolnmonstnftar:?l,l
D-fructose and D-mannose. This reaction-
known as the Lobry de Bruyn-von Ekenstein
transformatiorr-results in the formation of a
common intermediate-namely enediol--$or all
the three sugars,as depicted in Fig.2.8.
Theenediolsare highlyreactive,hencesugars
in alkaline solution are powerful reducing
agents.
ft+r,.luleFr'.lgr!s.lFeFtlsF
The sugarsare classifiedas reducingor non-
reducing.The reducingpropertyis attributedto
the free aldehyde or keto group of anomeric
carbon.
ln the laboratory, many testsare employed to
identify the reducing action of sugars.These
incfude Benedict's test, Fehling's test, Barfoed's
tesf etc. The reduction is much more efficient
in the alkaline medium than in the acid
medium.
The enediolforms(explainedabove)or sugars
reduce cupric ions (Cu2+)of copper sulphate
to cuprous ions (Cu+), which form a yellow
precipitate of cuprous hydroxide or a
red precipitate of cuprous oxide as shown
next.
t2H2O+ CueO{- 2Cu(OH)
It may be noted that the reducing property of
sugarscannothelp for a specificidentificationof
any one sugar,since it is a generalreaction.
0xida*iern
Depending on the oxidizing agent used, the
terminal aldehyde (or keto) or the terminal
alcoholor both the groupsmay be oxidized.For
instance,considerglucose:
1. Oxidation of aldehydegroup (CHO ------>
COOH) resultsin the formationof gluconicacid.
2. Oxidation of terminal alcohol group
(CH2OH------+COOH) leadsto the production of
glucuronicacid.
Reduetion
When treatedwith reducing agentssuch as
sodiumamalgam,the aldehydeor keto groupof
monosaccharideis reduced to corresponding
alcohol, as indicatedby the generalformula :
H
H-C:O H-C-Ol-t
I
RR
The important monosaccharidesand their
correspondingalcoholsare given below.
D-Glucose
D-Galactose------+D-Dulcitol
D-Mannose ------+D-Mannitol
D-Fructose --) D-Mannitol+ D-Sorbitol
D-Ribose -+ D-Ribitol
Sorbitol and dulcitol when accumulate in
tissuesin large amounts cause strong osmotic
effectsfeadingto swelling of cells,and certain
pathologicalconditions.e.g.cataract,peripheral
neuropathy,nephropathy.Mannitol is usefulto
reduce intracranialtensionbv forced diuresis.
Ghapter 2 : CAFIBOHYDRATES 17
H-C--O
I
H-C-OH
I
HO-C-H
I
H-C-OH
I
H-C-OH
I
cH2oH
D-Glucose
H-C:O
I
H-C:O
I
cH20H
Hydrorymethylfurfural
H-C:O
I
Formation of esters
The alcoholic groups of monosaccharides
may be esterified by non-enzymatic or
enzymatic reactions. Esterificationof carbo-
hydrate with phosphoric acid is a common
reaction in metabolism.Glucose 6-phosphate
and glucose 1-phosphateare good examples.
ATP donates the phosphate moiety in ester
formation.
lClycoside bond formation (see below) and
mutarotation(discussedalready) may also be
referred to, as these are also the characteristic
propertiesof monosaccharides.l
GLYCOSIDES
Glycosidesare formed when the hemiacetal
or hemiketal hydroxyl group (of anomeric
carbon)of a carbohydratereactswith a hydroxyl
group of another carbohydrate or a non-
carbohydrate (e.g. methyl alcohol, phenol,
glycerol). The bond so formed is known as
glycosidic bond and the non-carbohydrate
moiety (when present)is referredto as aglycone.
The monosaccharidesare held together by
glycosidic bonds to result in di-, oligo- or
polysaccharides(seelaterfor structures).
H-C=O
I _ + HrN-NH-CuHu
H-C-OH
R
Glucose Phenylhydrazine
H-C:N-NH-CoHs
I
H-C-OH
I
R
Glucohydrazone
l7-H2N-NH-C6H'
I
H-C:N-NH-CoHs
I
C:N-NH-CoHs
I
R
Glucosazone
Fig.2.10: A summatyof osazonefomation
H-C-OH C----r
tlll
H-C-OH Conc.HeSoo H-Q L
I rH I U
H-C-OH
'1
H-C I
CHrou 3H2o H-d---l
D-Ribose Furfural
Fig.2.9 : Dehydration of monosaccharides
with concentrated H
"SO
o.
Dehydration
When treatedwith concentratedsulfuricacid,
monosaccharidesundergodehydrationwith an
eliminationof 3 water molecules.Thus hexoses
give hydroxymethylfurfuralwhile pentosesgive
furfural on dehydration (Fi9.2.9).Thesefurfurals
can condense with phenolic compounds
(a-naphthol)to form coloured products.This is
the chemical basisof the popular Molisch test.
In case of oligo- and polysaccharides,they are
firsthydrolysedto monosaccharidesby acid,and
this is followed by dehydration.
Osazone formation
Phenylhydrazinein acetic acid, when boiled
with reducing sugars, forms osazones in a
reactionsummarizedin Fig,2,10.
As is evident from the reaction, the first two
carbons (Cr and C2) are involved in osazone
formation. The sugars that differ in their
configuration on these two carbons give the
same type of osazones,since the differenceis
maskedby bindingwith phenylhydrazine.Thus
glucose,fructoseand mannosegive the same
type (needle-shaped)osazones.
Reducingdisaccharidesalso give osazones-
maltose sunflower-shaped,and lactose powder-
puff shaped.
(RrcprcsentsCrto Crofglucose).
t8 BIOCHEMISTRY
Naming of glycosidic bond : The
nomenclatureof glycosidic bonds is based on
the Iinkagesbetweenthe carbon atomsand the
status of the anomeric carbon (o or p). For
instance,lactose-which is formed by a bond
between C1 of p-galactoseand Ca of glucose-
is namedas 0(.1-+ 4) glycosidicbond. The other
glycosidicbonds are describedin the structure
of di- and polysaccharides.
Physiologieally important glycosides
1. Glucovanillin (vanillin-D-glucoside)is a
naturalsubstancethat impartsvanilla flavour.
2. Cardiac glycosides(steroidalglycosides):
Digoxin and digitoxin contain the aglycone
steroidand they stimulatemusclecontraction.
3. Streptomycin, an antibiotic used in the
treatmentof tuberculosisis a glycoside.
4. Ouabain inhibits Na+- K+ ATPase and
blocksthe activetransportof Na+.
DERIVATIVESOF MONOSACCHARIDES
Thereare severalderivativesof monosaccha-
rides, some of which are physiologically
important
1. Sugar acids : Oxidation of aldehyde or
primaryalcoholgroupin monosaccharideresults
in sugaracids.Cluconic acid is producedfrom
glucose by oxidation of aldehyde (C1 group)
whereasglucuronicacid is formedwhen primary
alcoholgroup (C6)is oxidized.
2. Sugar alcohols (polyols) : They are
producedby reductionof aldosesor ketoses.For
instance,sorbitol is formed from glucose and
mannitol from mannose.
3. Alditols : The monosaccharides, on
reduction,yield polyhydroxyalcohols,known as
alditols. Ribitol is a constituent of flavin
coenzymes; glycerol and myo-inositol are
componentsof lipids.Xylitol is a sweetenerused
in sugarlessgumsand candies.
4. Amino sugars : When one or more
hydroxyl groups of the monosaccharidesare
replaced by amino groups, the products
formed are amino sugarse.g. D-glucosamine,
D-galactosamine.They are present as consti-
tuentsof heteropolysaccharides.
The amino groups of amino sugars are
sometimes acetylated e.g. N-acetyl D-gluco-
samrne.
N-Acetylneuraminic acid (NANA) is a
derivativeof N-acetylmannoseand pyruvicacid.
It is an important constituentof glycoproteins
and glycolipids.The term sialicacid is usedto
include NANA and its other derivatives.
Certain antibiotics contain amino sugars
which may be involvedin the antibioticactivity
e.g. erythromycin.
5. Deoxysugars: These are the sugarsthat
contain one oxygen lessthan that presentin the
parent molecule. The groups -CHOH and
-CH2OH become-CH2 and -CH3 due to the
absenceof oxygen.D-2-Deoxyriboseis the most
important deoxysugarsince it is a structural
constituentof DNA (in contrastto D-ribose in
RNA).
6. L-Ascorbic acid (vitamin C) : This is a
water-solublevitamin, the structureof which
closelyresemblesthat of a monosaccharide.
The structuresof selected monosaccharide
derivativesare depictedin Fig.2.l1.
Among the oligosaccharides,disaccharides
are the most common (Fig.2,l2).As is evident
from the name, a disaccharideconsistsof two
monosaccharideunits(similaror dissimilar)held
together by a glycosidic hond. They are
crystalline,water-solubleand sweetto taste.The
disaccharidesare of two types
'1. Reducingdisaccharideswith free aldehyde
or keto group e.g. maltose, lactose.
2. Non-reducingdisaccharideswith no free
aldehyde or keto group e.g. sucrose,trehalose.
Maltose
Maltose is composed of two a-D-glucose
unitsheldtogetherby cl (1 -+ 4) glycosidicbond.
Thefreealdehydegrouppresenton C1of second
glucoseanswersthe reducingreactions,besides
Ghapter & : CAFIBOHYDRATES 19
H-C:O
I
H-C-OH
I
HO-C-H
I
H-C-OH
I
H-C-OH
I
COOH
D-Glucuronicacid
OHH
D-2-Deoxyribose
cH2oH
I
H-C-OH
I
cH2oH
Glycerol
H NHz
D-Glucosamine
HOH
myo-lnositol
H3C-C--HN
HOH
N-Acetylneuraminicacid
Fiq.2.11 : Structuresol monosaccharidederivatives(selectedexamples).
the osazone formations (sunflower-shaped).
Maltosecan be hydrolysedby dilute acid or the
enzyme maltaseto liberate two moleculesof
cr-D-glucose.
ln isomaltose,the glucose units are held
togetherby o (1 --+6) glycosidiclinkage.
Cellobioseis another disaccharide,identical
in structurewith maltose,exceptthat the former
has p (1 -r 4) glycosidiclinkage.Cellobioseis
formedduringthe hydrolysisof cellulose.
Suoroee
Sucrose(canesugar)isthe sugarof commerce,
mostlyproducedby sugarcane and sugarbeets.
Sucrose is made up of a-D-glucose and p-
D-fructose.The two monosaccharidesare held
togetherby a glycosidicbond (a1-+ B2),between
Cj of c-glucose and C2 of B-fructose.The
reducing groups of glucose and fructose are
involvedin glycosidicbond, hencesucroseis a
non-reducing sugar,and it cannot form osazones.
Sucroseis the major carbohydrateproduced
in photosynthesis. lt is transported into the
storageorgansof plants (such as roots, tubers
and seeds).Sucroseis the mostabundantamong
the naturallyoccurring sugars.lt has distinct
advantagesover other sugarsas a storageand
transoortform. This is due to the fact that in
sucrose,both the functional groups (aldehyde
and keto)are held togetherand protectedfrom
oxidativeattacks.
Sucrose is an important source of dietary
carbohydrate.lt is sweeter than most other
commonsugars(exceptfructose)namelyglucose,
lactoseand maltose.Sucroseis employed as a
sweeteningagentin food industry.The intestinal
enzyme-sucrase-hydrolysessucroseto glucose
and fructosewhich are absorbed.
F-aetsse
Lactoseis more commonlv known as milk
sugarsinceit is the disaccharidefound in milk.
Lactoseis composed ol p-D-galactoseand B-D-
glucoseheld togetherby 0 (1 -r a) glycosidic
bond.The anomericcarbonof C1glucoseis free,
hence lactoseexhibits reducing propertiesand
formsosazones(powder-puffor hedgehogshape).
Lactose of milk is the most important
carbohydratein the nutritionof young mammals.
It is hydrolysedby the intestinalenzyme lactase
to glucoseand galactose.
lnversion ef suerose
Sucrose,as such is dextrorotatory(+66.5o).
But, r,r,hen hydrolysed, sucrose becomes
levorotatory(-28.2"). The processof change in
optical rotation from dextrorotatory (+) to
levorotatory(-) is referredto as inversion.The
BIOCHEMISTF|Y
HOH
Glucose Fructose
Sucrose
(a-D-glucosyl(1 --+2)p-D-fructose)
Galactose
Lactose
(p-D-galactosyl(1 -+ a)p-D-glucose)
Fig. 2.12 : Structures of disaccharides
-maltose, sucrose and lactose.
hydrolysed mixture of sucrose, containing
gfucoseand fructose, is known as invert sugar.
The processof inversionis explainedbelow.
Hydrolysisof sucroseby the enzyme sucrase
(invertasdor dilute acid liberatesone molecure
each of glucoseand fructose.ft is postulatedthat
sucrose (dextro) is first split into a-D-
glucopyranose(+52.5") and p-D-fructofuranose,
both being dextrorotatory. However, p-D-
fructofuranoseis lessstableand immediatelygets
converted to p-D-fructopyranose which is
stronglylevorotatory(-92"). The overalleffectis
that dextro sucrose (+66.5") on inversion is
converted to levo form (28.2'.
Polysaccharides(or simply glycans)consistof
repeat units of monosaccharides or their
derivatives,held togetherby glycosidicbonds.
Theyareprimarilyconcernedwith two important
functions-structural,and storageof energy.
Polysaccharides are linear as well as
branched polymers. This is in contrast to
structureof proteinsand nucleicacidswhich are
only linear polymers. The occurrence of
branchesin polysaccharidesis due to the fact
that glycosidic linkagescan be formed at any
one of the hydroxylBroupsof a monosaccharide.
Polysaccharidesare of two types
1. Homopolysaccharideswhich on hydrolysis
yield only a singletype of monosaccharide.They
are named based on the nature of the
monosaccharideunit. Thus,glucans arepolymers
of glucose whereas fructosans are polymers of
fructose.
2. Heteropofysaccharideson hydrolysisyield
a mixture of a few monosaccharidesor their
derivatives.
$tarch
Starch is the carbohydrate reserveof plants
which is the most importantdietary sourcefor
higheranimals,includingman. High contentof
starchis found in cereals,roots,tubers,vegetables
etc. Starch is a homopolymer composed of
D-glucoseunits held by a-glycosidicbonds. lt is
known as glucosan or glucan.
Starch consists of two polysaccharide
components-water soluble amylose (15-20o/ol
and a water insoluble amylopectin (80-85%).
Chemically, amylose is a long unbranched
chain with 200-1,00OD-glucoseunitsheld by c
(1 + 4) glycosidiclinkages.Amylopectin,on the
other hand, is a branchedchain with a (1 --r 6t
glycosidicbondsat the branchingpointsand c
(1 -; 4) linkages everywhere else (Fig.2.13).
Amylopectin molecule containing a few
ChapteF 2 : CARBOHYDFATES 21
D-Glucose D-Glucose
Amylopectin
o-Amylose
+- (1-* 6) Branch
MainchainLg
6nu
vt t2
thousandglucoseunits looks like a branched
tree (20-30 glucoseunits per branch).
Starches are hydrolysed by amylase
(pancreaticor salivary)to liberatedextrins,and
finally maltoseand glucoseunits.Amylaseacts
specificallyon a (1 -+ 4) glycosidicbonds.
Dextrins
Dextrins are the breakdown products of
starchby the enzyme amylaseor dilute acids.
Starch is sequentially hydrolysed through
different dextrins and, finally, to maltose and
glucose.The variousintermediates(identifiedby
iodine colouration) are soluble starch (blue),
amylodextrin (violet), erythrodextrin (red) and
achrodextrin (no colour).
Inulin
fnulin is a polymerof fructosei.e., fructosan.
It occursin dahlia bulbs,garlic,onion etc. lt is
a low molecularweight (around5,000) poly-
saccharideeasilysoluble in water. Inulin is not
utilized by the body. lt is used for assessing
kidney function through measurement of
glomerular filtration rate (GFR).
Glycogen
Clycogen is the carbohydrate reserve in
animals,henceoften referredro asanimal starch.
It is present in high concentration in liver,
followed by muscle,brainetc.Clycogenis also
found in plantsthat do not possesschlorophyll
(e.9.yeast,fungi).
The structureof glycogenis similarto that of
amylopectin with more number of branches.
Glucoseis the repeatingunit in glycogenjoined
togetherby u (1 + 4) glycosidicbonds,and a
(1 + 6) glycosidic bonds at branching points
(Fi9.2.1Q.The molecularweight (up to 1 x 108)
and the numberof glucoseunits (up to 25,000)
vary in glycogendependingon the sourcefrom
which glycogenis obtained.
22 BIOCHEMISTRY
Fiq.2.14: Structureofglycogen(A)Generalstructure
(B)Enlargedat a branchpoint.
Cellulose
Celluloseoccursexclusivelyin plantsand it is
the most abundant organic substancein plant
kingdom. lt is a predominantconstituentof
plant cell wall. Celluloseis totally absent in
animal body.
Cellulose is composed of p-D-glucose units
linked by 9 0 -+ 4) glycosidic bonds(Fi9.2.1fl.
Cellulosecannot be digestedby mammals-
includingman-due to lack of the enzymethat
cleavesB-glycosidicbonds(a amylasebreakscr
bondsonly). Certainruminantsand herbivorous
animalscontainmicroorganismsin thegutwhich
produce enzymesthat can cleave p-glycosidic
bonds. Hydrolysis of cellulose yields a
disaccharide cellobiose, followed by P-D-
glucose.
Cellulose, though not digested, has great
importancein human nutrition. lt is a major
constituentol fiber, the non-digestablecarbo-
hydrate.The functions of dietary fiber include
decreasing the absorption of glucose and
cholesterolfrom the intestine,besidesincreasing
the bulk of feces. (For details,Chapter 23)
Ghitin
Chitin is composed of N-acetyl D-
glucosamineunits held togetherby F (1 -+ a)
glycosidicbonds.lt isa structuralpolysaccharide
found in the exoskeletonof some invertebrates
e.g. insects,crustaceans.
When the polysaccharidesare composedof
differenttypesof sugarsor their derivatives,they
are referred to as heteropolvsaccharidesor
heteroglycans.
MUCOPOLYSACCHARIDES
Mucopolysaccharidesare heteroglycansmade
up of repeatingunitsof sugarderivatives,namely
amino sugarsand uronic acids.Theseare more
commonly known as glycosaminoglycans
(GAG).Acetylatedamino groups,besidessulfate
and carboxyl groups are generally present in
CAC structure.The presenceof sulfate and
carboxyl groups contributesto acidity of the
molecules, making them acid mucopoly,-
saccharides.
Someof the mucopolysaccharidesare found
in combination with proteins to forrn
mucoproteins or mucoids or proteoglycans
(Fig.2.l6l.Mucoproteinsmay containup to 95o,
carbohydrate and 5o/"protein.
S-D-Glucose
T
N
T
Ot
(B)
9H2OH
uqt, CH2oH
y'-O., , F--o. ,r4-Or
- (+ i) - r+ ,L^_K. X^_-oJ, ,./'o-'- J - L-/ " --l
Fig. 2.15 : Structureof cellulose(The repeat:r; --
'
may be several thousands).
CARBOHYDRATES 23
Fig. 2.16 : Diagrammaticrepresentationof a
prateoglycan complex.
Mucopolysaccharidesareessentialcomponents
of tissue structure.The extracellularspacesof
tissue (particularlyconnective tissue-cartilage,
skin, blood vessels,tendons)consistof collagen
and elastinfibersembeddedin a matrixor ground
substance.Thegroundsubstanceis predominantly
composedof CAC.
The importantmucopolysaccharidesincluoe
hyaluronicacid, chondroitin4-sulfate,heparin,
dermatansulfateand keratansulfate(Fig.Z.'[1.
j'i' ,ir:r:, | '.i. :,{,tiiiEl'l
Hyaluronicacid is an importantGAC found
in the groundsubstanceof synovialfluid of joints
and vitreoushumor of eyes.it is also presentas
a ground substancein connectivetissues,and
forms a gel aroundthe ovum. Hyaluronicacid
servesas a lubricantand shock absorbantin
joints.
BToMEDtCAt/ CLtft|ICALCO$CEpTS
Hyaluronicacid
rlr Glucose is the most important energy sourceol carbohgdratesto the mammals (except
ruminants).The bulk of dietary carbohydrote(starch)is dlgestedond finally obsorbedas
glucose into the body.
Ea Dextrose (glucosein solution in dextrorotatory form) is frequently used in medical
Rq'-
CF
practice.
Fructoseis obundantly found in the semen which is utilized by the spermsfor energy.
Seueral diseoses are associated with carbohydrate.se.g., diabetes mellitus, glycogen
storage diseoses,galactosemia.
trs Accumulation of sorbitol and dulcitol in the fissuesmoy cause certoin pathological
conditionse.g. cotaract, nephropothy.
t-s' Inulin, a polymer of t'ructose,is used fo ossessrenal function by meosuringglomerular
filtration rate (GFR).
ue The non-digestiblecarbohydratecellulose playsa signilicant role in human nutriticsn.
These include decreasing the intestinal absorption ol glucose and cholesterol, qnd
increasingbulk of feces to ouoid eonstipation.
rt The mucopolysaccharidehyaluronic acid seruesas a lubricant and shock absorbantin
ioints.
The enzgmehgaluronidaseof semendegradesthe gel (contains hyaluronic acid)around
the ouum. This qllows eft'ectiuepenetration of sperm into the ouum.
The mucopolysaccharideheparin is an onticoagulant(preuentsblood clotting).
The suruiual of Antarctic lish below -2"C is attributed to the antit'reeze glycoproteins.
streptomycin is a glycosideemployed in the treatment oJ tuberculosis.
!3:.
[j-
IF
s: -;--
s' -sS't/:-
-'-
24 BIOCHEMISTFIY
Hyaluronic acid is composed of alternate
units of D-glucuronic acid and N-acetyl
D-glucosamine.These two molecules form
disaccharideunits held togetherby 0 (t -+ S)
glycosidic bond (Fi9,2,15).Hyaluronic acid
containsabout 250-25,000 disaccharideunits
(heldby p 1 -+ 4 bonds)with a molecularweight
uo to 4 million.
Hyaluronidase is an enzyme that breaks
(B1 -+ 4 linkages)hyaluronic acid and other
CAC. This enzyme is present in high
concentrationin testes,seminalfluid, and in
certainsnakeand insectvenoms.Hyaluronidase
of semen is assignedan important role in
fertilization as this enzyme clears the gel
(hyaluronicacid) around the ovum allowing a
better penetration of sperm into the ovum.
Hyaluronidaseof bacteriahelps their invasion
into the animaltissues.
Ghondroitin sulfates
Chondroitin 4-sulfate (Greek: chondros-
cartilage) is a major constituent of various
mammalian tissues(bone, cartilage,tendons,
heart,valves,skin,corneaetc.).Structurally,it is
comparablewith hyaluronicacid. Chondroitin
4-sulfateconsistsof repeatingdisaccharideunits
composedof D-glucuronicacid and N-acetyl
D-galactosamine4-sulfate(Fig.2.lV.
Chondroitin5-sulfateis alsopresentin many
tissues.As evident from the name, the sulfate
group is found on C6 insteadof Ca.
Heparin
Heparin is an anticoagulant(preventsblood
clotting)thatoccursin blood,lung,liver,kidney,
spleenetc. Heparin helps in the releaseof the
enzyme lipoprotein lipase which helps in
clearingthe turbidityof lipemic plasma.
Heparin is composedof alternatingunits of
N-sulfoD-glucosamine6-sulfateand glucuronate
2-sulfate(Fi9.2.17).
Dermatan sulfate
The name dermatansulfateis derived from
the fact that this compoundmostlyoccursin the
skin. lt is structurallyrelated to chondroitin
D-Glucuronicacid N-Acetylglucosamine
Hyaluronic acid
H NH-CO-CH3
N-Acetylgalactosamine
4-sulfate
Chondroitin 4-sulfate
o-
D-Glucuronate-2-sulfateN-Sulfoglucosamine
6-sulfate
Heparin
t
-o'r
H NH_CO_CH.
N-Acetylgalactosamine
4-sulfate
Dermatansulfate
H NH_CO :-
N-Acetylglucosamine
6-sulfate
Keratansulfate
Fiq.2.17 : Structuresof commonglycosaminogi',-;-: -
D-Glucuronicacid
H O-SO;
-o-so3
H NH-SOa
qH2oH
o
the disaccharidesas repeatingunits.
Ghapter 2 : CAFIBOHYDHATES 25
Glycosaminoglycan Composition Tissuedistribution Function(s)
Hyaluronicacid D-Glucuronicacid,
N-acetylglucosamine
Connectivetissue,synovialfluid,
vitroushumor
Servesasalubricant.and
shockabsorber.Promotes
woundhealing
Chondroitinsulfate D-Glucuronicacid,
N-acetylgalactosamine
4-sulfate
Cartilage,bone,skin,bloodvessel
walls
Helpstomaintainthestructure
andshapesoftissues
Heparin D-Glucuronate2-sulfate,Blood,lung,liver,kidney,spleen
N-sulfoglucosamine
6-sulfate
Actsasananticoagulant
Dermatansulfate L-lduronicacid,N-acetyl-
galactosamine4-sulfate
Bloodvesselvalves,heartvalves, Maintainstheshapesoftissues
skin
Keratansulfate D-Galactose,N-acetyl-
glucosamine6-sulfate
Cartilage,cornea,connective
tissues
Keepscorneatransparent
4-sulfate.The only differenceis that there is an
inversion in the configuration around C5 of
D-glucuronic acid to form L-iduronic acid
(Fi9.2.1V.
Keratan sulfate
It is a heterogeneousCAG with a variable
sulfate content, besides small amounts of
mannose, fructose, sialic acid etc. Keratan
sulfateessentiallyconsistsof alternatingunitsof
D-galactosamine and N-acetylglucosamine
6-sulfate.
A summaryof the glycosaminoglycanswith
regardto composition,distributionand functions
is given in Table 2.3.
Several proteins are covalently bound to
carbohydrateswhich are referredto as glyco-
proteins. The carbohydrate content of
glycoproteinvariesfrom 1o/oto 90o/oby weight,
Sometimes the term mucoprotein is used for
glycoprotein with carbohydrateconcentration
more than 4"/o. Clycoproteins are very widely
distributedin the cells and perform variety of
functions.Theseincludetheir role as enzymes,
hormones,transportproteins,structuralproteins
and receptors.A selectedlist of glycoproteins
and their major functionsis given in Table2.4.
The carbohydratesfound in glycoproteins
include mannose, galactose, N-acetyl-
glucosamine, N-acetylgalactosamine,xylose,
L-fucoseand N-acetylneuraminicacid (NANA).
NANA is an importantsialicacid (SeeFig.2,l1).
Antifreeze glycoproteins : The Antarctic fish
live below -2oC, a temperatureat which the
Glycoprotein(s) Major function(s)
Collagen
Hydrolases,proteases,
glycosidases
Ceruloplasmin
lmmunoglobulins
Synovialglycoproteins
Thyrotropin,erylhropoietin
Bloodgroupsubstances
Fibronectin,laminin
Intrinsicfactor
Fibrinogen
Structure
Enzymes
Transport
Defenseagainstinfection
Lubrication
Hormones
Antigens
Cell-cellrecognitionand
adhesion
Absorptionofvitamin8,,
Bloodclotting
26 ElIOCHEMISTF|Y
blood would {reeze.lt is now known that ihese
fish contain antifreezeglycogtrateinwhich lower
the freezingpoint of waterand interferewith tne
crystalformationof ice. Antifreezegiycoproteins
consistof 50 repeatingunits of the tripeptide,
alanine-alawine-threonine. Each threonine
residue is bound to B-galactosyl(1 + 3) o(
N-acetylgalactosamine.
ri#i .f*iCA# '?
r,.4F.!"r.Ii $:F"r1.*fi {
"'.3
i4 t: * :il
The blood group antigens (of erythrocyte
membrane) contain carbohydratesas glyco-
proteinsor glycolipids.N-,A.cetylgaiactosamine,
galactose,fucose,sialic acid etc. are found in
the blood group substances.The carbohydrate
contentalso playsa determinantrole in blood
Eroup!n8.
X. Carbohydrs,tesare the polyhydroxyaldehydesor ketones,or campounds whichproduce
them on hydrolysis.The term sugor is applied to carbohydratessoluble in water and
stDeetto taste. Carbahgdratesqre the major dietary energy sources,besidestheir
inualuementin cell structure and uariousother t'unctions.
2. Carbohydrqtesare broadly c/ossiJiedinta 3 groups-ffionasqccharides,oligosoccharides
and ytoiysaccharides.The monosacchsridesare further diuided into dit't'erentcategories
bqsedan the presenceaf t'wnctionalgroups {oldosesar ketoses)and the number of
carbon atoms (trioses,tetroses,pentases,hexosesand heptcses).
3. Glyceraldehyde{triose) is the simplestcarbohydrateand is chosen as a reJerenceto
write the cont'iguratian of all other rnonasaccharides(D- anc L- forms). It' two
rnonosaccharidesdiffer in their structurearound o singlecarbonatom, they ore known
as eplmers.Glucoseand galactoseare C4-epimers.
4. D'Glucose is the most predominant naturally occurring aldosdmonosaccharide.
Giucoseexisfscs a and p anemerswith dit'Jerentopticalrotations. The interconuersion
of a and B anomericforms with changein theopticalrotatianis knoun asmutsratation.
5. Manosaccharidespariicipate in seuercl recctions"Theseinclude oxidation, reduction.
dehydration, asazone formetion etc. Formatian ol esters and glycosides by
manosacchqridesis af specialsignificanceln biochemical reactions.
6. Among the oligosacchqrides,disoccharidesare the most common. Theseinclude the
reducing disaccharidesnamely lactose(rnilk sugar)and maltase(malt sugar)and the
non-reducingsucrose(canesugar).
7. Palysacclwridesare the poiymersot' monosaccharidesor their deriuatiues,held together
by glycosidic bonds.Homopalysaccharidessre compasedot' a single manosaccharicle
(e.g., starch,glycogen,cellulose, inulin). Heteropolysaccharidescontain a mixture af
Jew monasaceharidesor thetr derluatiues(e.g., rnucapolysacaharides).
8. Slorch and glgcogensre the carbohydratereseruesot' plants and animalsrespectiuelg.
Cellulose,exclusiuelyt'ound in plants, is the structural constituent.Inulin is utilized to
ossesskidney tunction bg measuringglomerular t'iltration rate (GFR).
9. Mucopoiysaccharides(glycosominoglycans)are the essential companents o/ tlssue
structure. Theyprouide the mstrix or grownd substanceof extracellular tissuespacesin
whtchcollagenand elastinfibers are embedded.Hyaluranic ocid,chondroitin 4'sult'ote,
heporin, are amang the important glycosaminaglgcdns.
70. Glycoproteins are a group of biochernically important compaunds with a uariable
composition of carbohyd.rate(7-900/o),caualently bound to protein. Seueralenzyrnes,
hormanes,structura! proteinsand cellular receptorsare in fact glycoproteins.
Ghapter 2 : CAFIBOHYDHATES
I. Essayquestions
1. Define and classifycarbohydrateswith suitableexamples.Add a note on the functionsof
carbohydrates.
2. Describethe structureand functionsof mucopolysaccharides.
3. Cive an accountof the structuralconfigurationof monosaccharides,with specialreferenceto
glucose.
4. Discussthe structureand functionsof 3 biochemicallyimportantdisaccharides.
5. Definepolysaccharidesand describethe structureof 3 homopolysaccharides.
Short notes
(a)Epimers,(b)Mutarotation,(c)Osazoneformation,(d)Clycosidicbond,(e)Sugarderivatives,(fl
Anomers,(g)Enediol,(h)Amino su8ars,(i) Inversionof sucrose,(j) Deoxysugars.
Fill in the blanks
1. Namea non-reducingdisaccharide
2. The carbohydratethat is taken as a referencefor writing the configurationof others
3. lf two monosaccharidesdifferin configurationarounda singlecarbonatom,they are known
as
27
II.
III.
4.
5.
6.
7.
B.
9.
10.
The s and B cyclicformsof D-glucoseare referredto as
The non-carbohydratemoietyfound in glycosidesis known as
Cive an exampleof a glycosideantibiotic
Theglycosidicbondsat the branchingpointsin the structureof starchare
The polysaccharideemployedfor the assessmentof kidneyfunction
The glycosaminoglycanthat servesas a lubricantand shockabsorbantof joints
Namethe sialicacid,mostlyfound in the structureof glycoproteinsand glycolipids
IV. Multiple choice questions
11. Riboseand deoxyribosedifferin structurearounda singlecarbon,namely
(a)Cr (b)Cz (c)C: (d)Cq.
12. One of the followingis not an aldose
(a)Clucose(b)Calactose(c) Mannose(d) Fructose.
13. The glycosaminoglycanthat servesas an anticoagulant
(a) Heparin(b) Hyaluronicacid (c)Chondroitinsulfate(d) Dermatansulfate.
14. The followingpolysaccharideis composedof B-glycosidicbonds
(a)Starch(b)Clycogen(c) Dextrin(d)Cellulose.
15. The carbonatomsinvolvedin the osazoneformation
(a)'l and 2 (b) 2 and 3 (c) 3 and 4 (d) 5 and 6.
Lirpirdls
fl ?"'-o-
i
R--c-o1H
frCH2-H R3
The Jat speaks :
"ffith uater, I say, 'Touch menot':
T'otlte tongue,I am tasteful;
IY'ithin limits, I am datiful;
fn excess,I am dangerous!"
I ipids (Creek: lipos-fat) are of Breat
L importance to the body as the chief
concentratedstorageform of energy, besides
their role in cellularstructureand variousother
biochemicalfunctions.As such. lioids are a
heterogeneous group of compounds ano,
therefore,it is rather difficult to define them
preciselv.
Lipidsmay be regarded as organic substances
relatively insoluble in water, soluble in organic
solvents (alcohol, ether etc.), actually or
potentially related to fatty acidsand utilized by
the living cells.
Unlike the polysaccharides,proteins and
nucleic acids,lipids are not polymers.Further,
lipidsare mostlysmall molecules.
Lipids are broadlyclassified(modifiedfrom
Bloor) into simple, complex, derived and
miscellaneouslipids,whicharefurthersubdivided
into differentgroups
1. Simple lipids: Estersof fatty acids with
alcohols.Theseare mainly of two types
(a) Fatsand oils (triacylglycerols): Theseare
estersof fatty acids with glycerol. The
difference between fat and oil is only
physical.Thus,oil is a liquid while fat is
a solid at room temperature.
(b) Waxes: Estersof fattyacids(usuallylong
chain)with alcoholsotherthan glycerol.
These alcohols may be aliphatic or
alicyclic.Cetylalcoholis mostcommonly
found in waxes.
2. Complex(or compound)lipids: Theseare
estersof fatty acids with alcohols containing
additional groups such as phosphate,
nitrogenousbase, carbohydrate,protein etc
They are furtherdividedas follows
(a) Phospholipids:They containphosphor,c
acid and frequentlya nitrogenousbase
This is in addition to alcohol and fai:.
acids.
28
Chapter 3 : LIPIDS 29
(i) Glycerophospholipids: Thesephospho-
lipids containglycerolas the alcohol
e.9.,lecithin,cephalin.
(ii) Sphingophospholipids: Sphingosineis
the alcohol in this group of phospho-
lipidse.g.,sphingomyelin.
(b) Glycolipids: Theselipids contain a fatty
acid, carbohydrateand nitrogenousbase.
The alcohol is sphingosine,hence they
are also called as glycosphingolipids.
Clycerol and phosphateare absente.g.,
cerebrosides,gangliosides.
(c) Lipoproteins: Macromolecularcomplexes
of lipids with proteins.
(d) Other complexlipids: Sulfolipids,amino-
lipidsand lipopolysaccharidesareamong
the othercomplex lipids.
3. Derived lipids: Theseare the derivatives
obtainedon the hydrolysisof group 1 and group
2lipids which possessthe characteristicsof
lipids.Theseincludeglycerolandotheralcohols,
fatty acids,mono- and diacylglycerols,lipid (fat)
soluble vitamins, steroid hormones, hydro-
carbonsand ketonebodies.
4. Miscellaneouslipids: These include a
large number of compounds possessingthe
characteristics of lipids €.g., carotenoids,
squalene,hydrocarbonssuch as pentacosane(in
bees wax), terpenesetc.
NEUTRAT LIPIDS: The lipids which are
unchargedare referredto asneutrallipids.These
are mono-, di-, and triacylglycerols,cholesterol
and cholesterylesters.
Functions of lipids
Lipids performseveralimportantfunctions
1. They are the concentratedfuel reserveof
the body (triacylglycerols).
2. Lipids are the constituentsof membrane
structure and regulate the membrane
permeability(phospholipidsand cholesterol).
3. They serve as a source of fat soluble
vitamins(4, D, E and K).
4. Lipidsare importantas cellularmetabolic
regulators(steroidhormonesand prostaglandins).
5. Lipidsprotectthe internalorgans,serveas
insulatingmaterialsand give shapeand smooth
appearanceto the body.
Fatty acids are carboxylic acids with
hydrocarbonside chain. They are the simplest
form of lipids.
Occurrence
Fattyacidsmainly occur in the esterifiedform
as major constituentsof variouslipids.They are
also present as free (unesterified)fatty acids.
Fattyacidsof animalorgin are much simplerin
structure in contrast to those of plant origin
which oftencontaingroupssuch asepoxy,keto,
hydroxy and cyclopentanerings.
Even and odd carbon fatty acids
Most of the fatty acids that occur in natural
lipids are of even carbons(usually 14C-2OC).
This is due to the fact that biosynthesisof fatty
acidsmainly occurswith the sequentialaddition
of 2 carbon units. Palmitic acid (l6C) and
stearicacid (l$C) are the most common. Among
the odd chain fatty acids, propionic acid (3C)
and valericacid (5C)are well known.
Saturated and unsaturated
fatty acids
Saturatedfatty acids do not contain double
bonds,while unsaturatedfattyacidscontainone
or more double bonds. Both saturated and
unsaturatedfatty acids almost equally occur in
the natural lipids. Fatty acids with one double
bond are monounsaturated,and thosewith 2 or
more double bonds are collectivelv known as
polyunsaturated fafty acids (PIJFA).
Nomenclature of fatty acids
The namingof a fatty acid (systematicname)
is basedon the hydrocarbonfrom which it is
derived. The saturatedfatty acids end with a
suffix -anoic (e.g., octanoic acid) while the
unsaturatedfatty acids end with a suffix -enoic
30 BIOCHEMISTF|Y
(e.9., octadecanoic acid). In addition to
systematicnames/ fatty acids have common
nameswhich are more widely used (Iable J. l).
Numbering of carbon atoms : lt startsfrom
the carboxylcarbonwhich is takenas number1.
The carbonsadjacentto this (carboxylC) are2,
3, 4 and so on or alternatelya, F, T and so on.
The terminalcarbon containingmethyl group is
known omega (or) carbon. Starting from the
methylend, the carbonatomsin a fattyacid are
numberedas omega 1, 2, 3 etc. The numbering
of carbon atoms in two different ways is given
below
7654321
cH3 - cH2 - cH2- cH2-cH2 - cH2 - COOH
01 a2 o)3 ()4 ol5 (t)6
Length of hydrocarbon
cha:n of fatty acids
Dependingon the length of carbon chains,
fatty acids are categorizedinto 3 groups-short
chain with less than 6 carbons; medium chain
with 8 to 14 carbons and long cfiain with 16 to
24 carbons.
Shorthand representation
of latty aclds
lnstead of writing the full structures,
biochemists employ shorthand notations (by
numbers)to representfatty acids. The general
rule is that the total numberof carbonatomsare
written first,followed by the nunrberof double
bonds and finally the (firstcarbon) position of
Common Name Systematicname Abbreviationx Structure
l.Saturatedfattyaclds
Aceticacid
Propionicacid
Butyricacid
Valericacid
Caproicacid
Caprylicacid
Capricacid
Lauricacid
Myristicacid
Palmiticacid
Stearicacid
Arachidicacid
Behenicacid
Lignocericacid
Ethanoicacid
n-Propanoicacid
n-Butanoicacid
n-Pentanoicacid
n-Hexanoicacid
n-Octanoicacid
n-Decanoicacid
n-Dodecanoicacid
n-Tetradecanoicacid
n-Hexadecanoicacid
n-Octadecanoicacid
n-Eicosanoicacid
n-Docosanoicacid
n-Tetracosanoicacid
CHsCO0H
CHgCHzCOOH
CHs(CHz)z0O0H
CHo(CHz)gCOOH
CHs(CHe)+COOH
CHe(CHz)oCOOH
CHs(CHz)eC0OH
CHs(CHz)roCOOH
CHs(CHzhzCOOH
CHg(CHz)t+CO0H
CHs(CHz)roC0OH
CHg(CHz)reCOOH
CHs(CHz)zo00OH
CH3(CHz)zzCOOH
2:0
3:0
4:0
F.n
6:0
8:0
10:0
12:0
14:0
16:0
18:0
20:0
22:0
24:0
ll. Unsaturatedfattyacids
Palmitoleicacid
Oleicacid
Linoleicacid**
Linolenicacid*x
Arachidonicacid
cr1s9-Hexadecenoicacid
cls-9-Octadecenoicacid
cls,cls-9,12-Octadeca-
dienoicacid
Allce9,12,15-0cta-
decatrienoicacid
Allcls-5,8,11,14-
16:1;9
18:1;9
18:2;9,12
18:3;9,12,'15
20:4;5,8,11,14
CHg(CHz)sCH=CH(CHz)zCOOH
CHs(CHz)zCH=CH(CHz)zCOOH
CHg(CHz)+CH=CHCHzCH=CH(CHz)zCOOH
CHoCHzCH=CHCHzCH=CHCHzCH
=CH(CHz)zCO0H
CHg(CHz)+CH=CHCHzCH=CHCHzCH
Elc0:a!tr3e!o!1ci1___ __=9H9'tcl=_cl9F!)49oli
* Totalnunberofcarbonatons,followedbythenumberotdoublebondsandthefirctcarbonposrtionotthedoublebond(s).
** Essentialfawacids.
Ghapten 3 : LIPIDS 31
double bonds, startingfrom the carboxyl end.
Thus,saturatedfattyacid, palmiticacid iswritten
as.l 6:0, oleic acid as 18:1;9, arachidonic
acid as 20 : 4; 5, 8, 11, 14.
There are other conventionsof representing
the double bonds.Ae indicatesthat the double
bond is between9 and 10 of the fatty acid. o 9
representsthe double bond position(9 and 10)
from the <oend. Naturallyoccurringunsaturated
fatty acids belongto ro 9, ol 6 and o 3 series.
a 3 series Linolenicacid(18 : 3;9, 12, 15)
a 6 series Linoleicacid ('l8 : 2; 9, 12) and
arachidonic acid (20 : 4; 5, 8,
11, 14)
ro9 series Oleicacid(18 : 1; 9)
The biochemically important saturatedand
unsaturated fatty acids are given in the
Table 3.1.
The fatty acidsthat cannotbe synthesizedby
the body and, therefore, should be supplied in
the diet are known asessentialfattyacids(EFA).
Chemically, they are polyunsaturated fatty
acids, namely linoleic acid (18 : 2; 9, 12) and
Iinolenic acid (18 : 3; 9, 12, 15). Arachidonic
acid (20 :4;5,8, 11,14) becomesessential,if
its precursorlinoleic acid is not providedin the
diet in sufficientamounts.The structuresof EFA
are given in the Table3.1.
Biochemical basis for essentiality: Linoleic
acid and linolenic acid are essentialsince
humans lack the enzymesthat can introduce
double bonds beyond carbons9 to 10.
Functionsof EFA: Essentialfatty acids are
required for the membrane structure and
function, transportof cholesterol,formation of
lipoproteins,preventionof fatty liver etc. They
are also needed for the synthesisof another
important group of compounds, namely
eicosanoids(Chapter 32.
Deficiency of EFA: The deficiency of EFA
results in phrynoderma or toad skin,
characterizedby the presenceof hornyeruptions
H..ar(CHz)zCOOH
H'c'1cHr;rcu,
Oleic acid
(clsform)
Fig. 3.1 : Cis-trans isomerism in
unsaturated fattv acids.
on the posteriorand lateralpartsof limbs,on the
back and buttocks,lossof hair and poor wound
healing.
lsomerism in
unsaturated fatiy aeids
Unsaturated fatty acids exhibit geometric
isomerismdependingon the orientationof the
groupsaround the double bond axis.
lf the atomsor acyl groupsare presenton the
same side of the double bond, it is a cis
configuration. On the other hand, if the groups
occur on the opposite side, it is a trans
configuration. Thus oleic acid is a cis isomer
while elaidic acid is a transisomer,as depicted
in Fig.3.1. Cis isomersare lessstablethan frans
isomers. Most of the naturally occurring
unsaturatedfatty acids exist as crs isomers.
In the cis isomericform, there is a molecular
binding at the double bond. Thus, oleic acid
exists in an L-shapewhile elaidic acid is a
straightchain.Increasein the numberof double
bonds will cause more bends (kinks) and
arachidonicacid with 4 doublebondswill have
a U-shape.lt is believed that cis isomersof fatty
acids with their characteristic bonds will
compactlypack the membranestructure.
Hydroxy fatty acids: Someof the fatty acids
are hydroxylated.p-Hydroxybutyricacid, one of
the ketonebodiesproducedin metabolism,is a
simple example of hydroxy fatty acids.
Cerebronic acid and recinoleic acid are long
chain hydroxy fatty acids.
Cyclic fatty acids: Fatty acids with cyclic
structuresare ratherraree.g./ chaulmoogric acid
found in chaulmoogra oil (used in leprosy
treatment)containscyclopentenylring.
Elaldicacid
(fransform)
32 BIOCHEMISTFIY
U
A CH2-O-C Fl,
ltl
R2-C-O-CH O
ttl
cH2-o-c-R3
Triacylglycerol
o
cH2-o-c -B
t-
HO_CH
I
cH20H
1-Monoacylglycerol
o
o
Rz-C
cH2-o-c-R,
-o-cH
I
cH2oH
1,2-Diacylglycerol
O CH,_OH
ill
R-C-O-CH
I
cH2oH
2-Monoacylglycerol
Fig. 3.2 : General structures of acylglycerols
(For palmitoyl R = CtsHati for stearoyl R = C.rzHssiFor linoleoyl R = qtHsi
Eicosanoids:Thesecompoundsare relatedro
eicosapolyenoicfatty acids and include prosta-
glandins,prostacyclins,leukotrienesand throm-
boxanes.Theyarediscussedtogether(Chapter32).
Triacylglycerols (formerly triglycerides) are
the estersof glycerol with fatty acids. The fats
and oils thatarewidely distributedin both plants
and animals are chemically triacylglycerols.
They are insolublein water and non-polarin
characterand commonly known as neutralfats.
Fatsas stored fuel : Triacylglycerolsare the
most abundantgroup of lipids that primarily
function as fuel reservesof animals. The fat
reserveof normal humans (men 2Oo/o,women
25% by weigh$ is sufficientto meet the body's
caloric requirementsfor 2-3 months.
Fats primarily occur in adipose tissue:
Adipocytes of adipose tissue-predominantly
found in the subcutaneouslayer and in the
abdominalcavity-are specializedfor storageof
triacylglycerols.The fat is storedin the form of
globulesdispersedin the entirecytoplasm.And
surprisingly,triacylglycerolsarenot the structural
componentsof biological membranes.
Structures of acylglycerols: Monoacyl-
glycerols, diacylglycerolsand triacylglycerols,
respectivelyconsistingof one, two and three
moleculesof fatty acidsesterifiedto a molecule
of glycerol,are known (Fi5.3.2).Among these,
triacylglycerols are the most important
biochemically.
Simpletriacylglycerolscontainthe sametype
of fattyacid residueat all the threecarbonse.g.,
tristearoylglycerolor tristearin.
Mixed triacylglycerols are more common.
They contain2 or 3 different typesof fattyacid
residues.In general,fatty acid attachedto C1 is
saturated,that attached to C2 is unsaturated
while that on C3 can be either.Triacylglycerols
are named according to placement of acyl
radicalon glycerole.9.,'l
,3-palmitoyl2-linoleoyl
glycerol.
Triacylglycerols of plants, in general, have
higher content of unsaturated fatty acids
compared to that of animals.
$tereospecific numbering
of glycerol
The structureof glycerolgivesan impression
thatcarbons1 and 3 are identical.Thisis not true
in a 3-dimensionalstructure.In orderto represent
the carbonatomsof glycerolin an unambiguous
manner, biochemists adopt a stereospecific
numbering(sn)and prefixglycerolwith sn.
6n,on
no-C'.-H
6tr,ot
sn-GfcJrol
C*rapter'3: LIPIDS 33
It should be noted that C1 and C3 are
different. Cells possess enzymes that can
distinguish these two carbons. Thus
glycerokinasephosphorylatessn-3(andnot sn-l)
glycerolto give sn-glycerol3-phosphate.
PROPERTIESOF TRIACYLGTYCEROLS
A few importantpropertiesof triacylglycerols,
which have biochemical relevance, are
discussedbelow
1. Hydrolysis: Triacylglycerols undergo
stepwiseenzymatichydrolysisto finally liberate
free fatty acids and glycerol. The processof
hydrolysis,catalysedby lipasesis importantfor
digestionof fat in the gastrointestinaltract and
fat mobilizationfrom the adiposetissues.
2. Saponification: The hydrolysisof triacyl-
glycerolsby alkalito produceglyceroland soaps
is known as saoonification.
Triacylglycerol+ 3 NaOH ---------+
Clycerol+ 3 R-COONa(soaps)
3. Rancidity: Rancidityis the term used to
represent the deterioration of fats and oils
resultingin an unpleasanttaste.Fatscontaining
unsaturatedfatty acids are more susceptibleto
ranciditv.
Rancidity occurs when fats and oils are
exposed to air, moisture, light, bacteria etc.
Hydrolytic rancidity occurs due to partial
hydrolysis of triacylglycerols by bacterial
enzymes.Oxidativerancidityis due to oxidation
of unsaturatedfatty acids. This results in the
formation of unpleasant products such as
dicarboxylic acids, aldehydes, ketones etc.
Rancid fats and oils are unsuitablefor human
consumotion.
Antioxidants : The substanceswhich can
preventthe occurrenceof oxidativerancidityare
known as antioxidants. Trace amounts of
antioxidantssuch as tocopherols(vitamin E),
hydroquinone,gallic acid and c,-naphtholare
addedto the commercialpreparationsof fatsand
oilsto preventrancidity.Propylgallate,butylated
hydroxyanisole(BHA) and butylated hydroxy-
toluene(BHT)are the antioxidantsused in food
preservation.
a. tipid peroxidation in vivo: In the living
cells, lipids undergo oxidation to produce
peroxidesand free radicalswhich can damage
the tissue.Thefreeradicalsarebelievedto cause
inflammatory diseases, ageing, cancer/
atherosclerosisetc. lt is fortunatethat the cells
possessantioxidantssuchasvitamin E,urateand
superoxidedismutaseto prevent in vivo lipid
peroxidation (Chapter 34).
Tests to check purity
of fats and oils
Adulterationof fatsand oils is increasingday
by day. Several tests are employed in the
laboratoryto check the purity of fats and oils.
Some of them are discussedhereunder
lodine number: lt is defined as the grams
(number) of iodine absorbedby 100 g of fat or
oil. lodine number is usefulto know the relative
unsaturationof fats,and is directly proportional
to the content of unsaturatedfatty acids. Thus
lower is the iodine number,lessis the degreeof
unsaturation.The iodine numbersof common
oils/fatsare given below.
FaUoil lodine number
Coconutoil
Butter
Palmoil
Oliveoil
Groundnutoil
Cottonseedoil
Sunfloweroil
Linseedoil
7- 10
25- 28
4C- 55
80- 85
85- 100
100- 110
125- 135
175-200
Determinationof iodinenumberwill help to
know the degreeof adulterationof a given oil.
Saponificationnumber: lt is defined as the
mg (number) of KOH required to hydrolyse
(saponify)one gram of fat or oiL Saponification
number is a measureof the averagemolecular
sizeof the fattyacidspresent.Thevalueis higher
for fats containing short chain fatty acids. The
saponificationnumbersof a few fatsand oils are
given below
Humanfat : 195-200
Butter :230-240
Coconutoil : 250-260
34 ElIOCHEMISTRY
Reichert-Meissl(RM) number: lt is definedas
the number of ml 0.1 N KOH required to
completelyneutralizethe soluble volatile fatty
acidsdistilledfrom 5 g fat. RM number is useful
in testingthe purity of buttersince it containsa
goodconcentrationof volatilefattyacids(butyric
acid, caproicacid and caprylicacid).This is in
contrastto other fats and oils which have a
negligibleamount of volatile fatty acids. Butter
hasa RM numberin the range25-30,while it is
lessthan I for mostotheredibleoils. Thusany
adulteration of hutter can be easily tested by
this sensitiveRM number.
Acid number : lt is definedas the numberof
mg of KOH requiredto completely neutralize
freefatty acidspresentin one gramfat or oil. In
normalcircumstances,refinedoils shouldbe free
from any free fatty acids. Oils, on
decomoosition-due to chemical or bacterial
contamination-yield freefatty acids.Therefore,
oils with increasedacid number are unsafefor
humanconsumption.
These are complex or compound lipids
containingphosphoricacid,in additionto fatty
acids,nitrogenousbaseand alcohol(Fig.3.3).
There are two classesof phospholipids
1. Clycerophospholipids(or phosphoglyce-
rides)that contain glycerolas the alcohol.
2. Sphingophospholipids(or sphingomyelins)
that containsphingosineas the alcohol.
1.i t
".t
.;:i r,. : . ,,,.i., i-l,
Clycerophospholipidsare the major lipids
thatoccur in biologicalmembranes.Theyconsist
of glycerol 3-phosphateesterifiedat its C1 and
C2 with fatty acids. Usually, C1 contains a
saturated fatty acid while C2 contains an
unsaturatedfatty acid.
1. Phosphatidicacid : This is the simplest
phospholipid. lt does not occur in good
concentration in the tissues. Basically,
phosphatidicacid is an intermediatein the
synthesisof triacylglycerolsand phospholipids.
The other glycerophospholipidscontaining
differentnitrogenousbasesor other groupsmay
be regardedas the derivativesof phosphatidic
acid.
2. Lecithins (phosphatidylcholine)zTheseare
the mostabundantgroupof phospholipidsin the
cell membranes.Chemically,lecithin (Creek :
lecithos-egg yolk) is a phosphatidicacid with
choline as the base. Phosphatidylcholines
represent the storage form of hody's choline.
*
BtoMEDtCAL/ CLtNtCAt CONCEpTS
os Lipids are important to the body as constituentsof membranes,sourceol fat soluble
(A, D, E and K) uitaminsqnd metabolic regulators(steroid hormonesand prostaglandlns),
e Triacylglycerols (fots) primarily stored in the adipose tissue ore concentrated t'uel
reseruesof the body. Fatst'ound in the subcutoneoustissueand around certaln orgons
serueos thermal insulators,
se The unsaturatedfatty acids-linoleicand linolenic acid-<re essentiolto humans, the
deficiencyof which cousesphrynodermo or toad skin.
s The cyclicfatty acid, namelychoulmoogricocid,isemployedin the treatmentof leprosy.
og Fqts and oils on exposureto ah; moisture, bacteriaetc. undergo rancidity (deterioration).
Thts can be preuented by the addition ol certain antioxidants (uitamin E, hgdroquinone,
gallic acid).
w In food preseruation,antioxidants-namely propyl gallote, butylated hydroxyanisole
and butylated hydroxytoluene--arecommonly used.
Chapter 3 : LIPIDS 35
oll
g cH2-o-c-R1
ill
RI-C-O-CH .:1
-l
CH2-i-'-r'- i't
(1)Phosphatldicacid
,11
ill
i tz)Leclthln(phosphatidylcholine)
,E
otl
I CH2-O-C-R1
ill
R2-C-O-qH rf
CH2-C-
--l-CH2-CH2-NH2
C- Ethanolamine
(3)Cephalln(phosphatidylethanolamine)
o
tl
?
cH2-o-c-Rl
R2-c-o-?H {l
CH2-r-:- = C-CHz-CH-COO-
o .),f,l(5)Phosphatldylserlne
myalnositol
(4)Phosphatidyllnosltol
A QH2-O-CF{=CH-Rlltl
R2-C-O-CH .:1
CH2-t', -i' i----CHz-CH2-NH2
,t__
C- Ethanolamine
(6)Plasmalogen(phosphatidalelhanolamine)
r, n-cH2
?
tr.
?
Hc-o-c-R3
R4-C-O-CH2
(7)Cardlollpin(diphosphatidylglycerol)
?
cH2-o-c-R1cH2-,
R2-C-O-CH I H?-OH
^
CH2-.i ,: r-.'-CHe
+
l- ehospnatioytgty."ro,I
lCeramid" _
(/t'soninoosrne$)>
CH3-(CH2)12-CH:CH-CH-?H-NH-C-R
' ,
*.CHg
r_-CHz-CHz-Nf9,Tt
Choline 'n3
(8)Sphlngomyelln
Fig. 3.3 : Sttucturesof phospholipids.
36 BIOCHEMISTF|Y
(a) Dipalmitoyl lecithin is an important
phosphatidylcholinefoundin lungs,lt isa
surface active agent and prevents the
adherence of inner surface of the
lungsdue to surfacetension.Respiratory
distresssyndromein infantsis a disorder
characterizedby the absenceof dipalmitoyl
lecithin.
(b) Lysolecithinis formed by removalof the
fatty acid either at C, or C, of lecithin.
3. Cephafins (phosphatidylethanolamine):
Ethanolamineis the nitrogenousbasepresentin
cephalins,Thus,lecithinandcephalindifferwith
regardto the base.
4. Phosphatidylinositol: The steroisomer
myo-inositolis attachedto phosphatidicacid to
givephosphatidylinositol(Pl).Thisisan important
comDonentof cell membranes.The action of
certain hormones(e.9.oxytocin, vasopressin)is
mediatedthroughPl.
5. Phosphatidylserine:The amino acid
serineis presentin this group of glycerophos-
pholipids.Phosphatidylthreonineis alsofound in
certaintissues.
6. Plasmalogens: When a fatty acid is
attachedby an etherlinkageat C1 of glycerolin
the glycerophospholipids, the resultant
compound is plasmalogen. Phosphatidal-
ethanolamineis the most imoortantwhich is
similarin structureto phosphatidylethanolamine
but for the ether linkage(in place of ester).An
unsaturatedfatty acid occurs at C1. Choline,
inositoland serinemay substituteethanolamine
to give other plasmalogens.
Z. Cardiolipin: lt is so named as it was first
isolated from heart muscle. Structurally, a
cardiolipin consists of two molecules of
phosphatidicacid held by an additionalglycerol
through phosphategroups. lt is an important
componentof inner mitochondrialmembrane.
Cardiolipin is the only phosphoglyceridethat
possessesantigenic properties.
Sphingomyelins
Sphingosineis an amino alcohol presentin
sphingomyelins(sphingophospholipids).They do
notcontainglycerolat all. Sphingosineisattached
by an amide linkageto a fatty acid to produce
ceramide.The alcohol group of sphingosineis
bound to phosphorylcholinein sphingomyelin
structure(Fig.3.3).Sphingomyelinsare important
constituentsof myelin and are found in good
quantityin brain and nervoustissues.
Action of phospholipases
Phospholipasesare a group of enzymesthat
hydrolysephospholipids.Thereare four distinct
phospholipases(Ar, 42, C and D), eachone of
them specificallyactson a particularbond. For
details,refer lipid metabolism(Chapter l4).
Functions of phospholipids
Phospholipidsconstitutean importantgroup
of compound lipids that performa wide variety
of functions
1. In associationwith proteins,phospholipids
form the structural components of membranes
and regulatemembranepermeability.
2. Phospholipids (lecithin, cephalin and
cardiolipin)in the mitochondriaare responsible
for maintaining the conformation of electron
transportchain components,and thus cellular
respiration.
3. Phospholipidsparticipatein the absorption
of fat from the intestine.
4. Phospholipids are essential for the
synthesisof different lipoproteins,and thus
participate in the transport of lipids.
5. Accumulationof fat in liver(fattyliver)can
be preventedby phospholipids,hence they are
regarded as lipotropic factors.
6. Arachidonicacid,an unsaturatedfattyacid
liberated from phospholipids, serves as a
precursorfor the synthesisof eicosanoids(prosta-
glandins,prostacyclins,thromboxanesetc.).
7. Phospholipidsparticipatein the reverse
cholesteroltransport and thus help in the
removalof cholesterolfrom the body.
8. Phospholipidsact as surfactants(agenL.
lowering surface tension). For instance
dipalmitoylphosphatidylcholineis an importar:
fung surfactant. Respiratory distresssyndrome ^
infantsis associatedwith insufficientproductio^
of this surfactant.
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
Biochemistry  satyanarayana_chakrapani
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Biochemistry satyanarayana_chakrapani

  • 1.
  • 2. Dr, lJ, Satyanarayana M.Sc,.Ph.D.,F.l.C.,F.A.C.B. Professor of Biochemistry Siddhartha Medical Colle g e (NTR University of Health Sciences) Vijayawada, 4.P., India Dr, lJ, Chakrapani M.B.B,S.,M.S. BCDCDT(SAn|D ALLTED lPf Ltd. No.1-E(1) "SHUBHAMPLAzA" (lst Floor) 83/I, BBLrRcrnrn MarN Roeo, Korrere 700010 (Ixora) k:i : (+9| -33)6535-3844,2241-8573 oFax : (033)2358-2127 e-mail : books@cal.vsnl.net.in
  • 3. Eiochemistrg First Published : March 1999 Reprinted: 1999 RevisedReprint: August 2000 Reprinted: 2OQO,2001, 2QO2 Second Revised Edition : June 2002 Reprinted: 2003 RevisedReprint: 2004 RevisedReprint: 2005 Third Revised Edition (multicolour) : 2006 Revised Reprint : 2007 @Copyright reserued by Dn U. Satyanarayana. Publishing rights and Printing rights reserved by the Publisher. Marketing rights, Distributing rights & Selling rights reserued by the Publisher. All rights reserved. No part of this publication may be reproduced or transmifted in any form or by any means, electronic, mechanical, photo-copying, recording or any informatign storage and retrieval system, without the prior wiitten permission of the Publisher. Exclusive rights reserued by the Publisher for publishing, printing, sale, marketing, distribution, expoft and translation of this book for all editions and reprints thereof. Cover Design Depicts the universal energy currency of the living world-ATP, predominantly synthesized by the mitochondria ol the cell (the functional unit of life), in comparison with the intemational currencies--$, t, €, Rs, Y. Publisher Typesetter Printer ArunabhaSen BOOKS AND ALLIED (P) Lro. 8/1 ChintamoniDas Lane, Kolkata700009 BOOKS AND ALLIED (P) Lro. 8/1 ChintamoniDas Lane, Kolkata700009 SWAPNA PRINTINGWORKS (P) Lro. 52 Raja RammohanRoy Sarani,Kolkata700009 ShyamalBhattacharyaProject Supervisor : tsBN Bt-8?!1q-80-t Price: Rs.575.00lRupeesFivehundredandSeventy{ive)only US$12.00only AuthorsSponsored& Supportedby : UIBFALAAUTFIOR-PUBTISHERINTERTINKS D.No.: 48-16-10,NagarjunaNagar,MahanaduRoad,Vrjayawada-520008(A"Pl
  • 4. Prefaceto the Third Edition Theresponseto the first andthe secondeditionsof my book'Biochemistry'(reprintedseveraltimesin just 6 years)from the studentsandteachersis simplyoverwhelming.I wasfloodedwith highlyappreciative lettersfrom all cornersof Indiaandabroad!Thisgivesme immensesatisfactionandencouragemLntin this academicventure. I havecorrespondedwith manybiochernistryteachers,invitingtheir commentsandopinionsfor further improvingthe book.Mostof them havebeenkind enoughto offerconstructivesuggestions.I alsovisited severalcollegesandhadpersonalinteractionwith facultymembersandstudents.Theseexercises,spreadover the past 6 years,have helpedme to get direct feedbackon my book, besidesrealisingthe additional requirementsof students. I havegreatpleasurein presentingthe third editionof my bookwith severalunique/novelfeatures,some high-lightsof which are listedbelow. . A thoroughrevisionandupdatingof eachchapterwith latestadvances- . Multicolouredillustrationsfor a betterunderstandingof chemicalstructuresandbiochemicalreactions. . Increasein the font sizeof the text for morepleasantandcomfortablereading. o Incorporationof a newSectionon MolecularBiologyandBiotechnology. . Additionof ten new chapters-humangenomeproject,genetherapy,bioinformatics,free radicalsand antioxidants,tissueproteinsandbodyfluids,environmentalbiochemistry,genetics,immunologyetc. . An improvedorientationand treatmentof humanbiochemistryin healthanddisease. . Additionof practicalbiochemistryandclinicalbiochemistrylaboratoryin the appendix. It is true that I representa selectedgroupof individualsauthoringbooks,havingsometime at disposal, besideshardwork,determinationanddedication.I considermyselfan eternallearneranda regularstudent of biochemistry.However,it is beyondmy capabilityto keeptrackof theevergrowingadvancesin biochemistry dueto the exponentialSrowthof the subject.And this makesme nervous,wheneverI think of revisingthe book.I honestlyadmitthat I haveto dependon maturereadersfor subsequenteditionsof this book. AN INVITATION TO READERS It is not all the time possiblefor me to meetthe readersindividuallyandgettheir feedback,despitemy ferventwish.Of course,I dowrite to somepeoplepersonaliyseekingtheir opinions.However,I wishto have the commentsandsuggestionsof eachoneof the readersof my book.I sincerelyinvitethe readersto feelfree andwrite to me expressingtheir frank opinions,criticalcommentsandconstructivesuggestions. DT.U. SATYANARAYANA trl
  • 5. I owea deepdebtof gratitudeto my parents,the lateSri U.VenkataSubbaiah,andSmt. Vajramma,for cultivatingin me the habitof earlyrising.Thewriting of this bookwouldneverhavebeenpossiblewithout this healthyhabit.I am gratefulto Dr. B. S.NarasingaRao(formerDirector,NationalInstituteof Nutrition, Hyderabad)for discipliningmy professionallife, andto my eldestbrother Dr. U. Gudaru(formerProfessorof PowerSystems,WalchandCollegeof Engineering,Sangli)for discipliningmy personallife. My elder son, U. Chakrapani(MBBS)deservesa specialplacein this book. He madea significant contributionat everystageof its preparation-writing, verification,proof-readingandwhat not. I hadthe rare privilegeof teachingmy sonashehappenedto bea studentof our college.Anda majorpartof this bookwas writtenwhilehewaslearningbiochemistry.Thus,hewasthe firstpersonto learnthesubjectof biochemistry from my handwrittenmanuscript.Thestudent-teacherrelation(ratherthan the father-son)hashelpedme in receivinSlconstantfeedbackfrom him and restructurethe book in a way an undergraduatestudentwould expecta biochemistrytextbookto be. Next,I thankDr. G.PitcheswaraRao(formerProfessorof Anatomy,SMC,Vijayawada)for his constructive criticism and advice,and Dr. B. Sivakumar(Director,NationalInstituteof Nutrition, Hyderabad)for his helpful sugi5lestionson the microfigures.I am gratefulto my nephew,Mr. U. SrinivasaRao,for helping me in drawingsomefigures. Last but not least,I thank my wife Krishna Kumari and my youngerson,Amrutpani,without whose cooperationand encouragementthis book could never have beenwritten. The manuscriptwas carefully nurturedlike a newborn babyandthe bookhasnow becomea full-pledgedmemberof our family. ACKNOWLEDGEMENTSTO THE THIRD EDITION I amindebtedto a largenumberof friends,pen-friendsandstudentswhohelpedmeto reviseandimprove the qualityof this book.I haveindividuallyandpersonallythankedall of them (whonumbera fewhundreds!). I onceagainexpressmy gratitudeto them. I thank my friend and colleague,Mr. M.S.T.JaganMohan,who has helpedme with his frequent interactionsto improvethe book,andmakeit morestudent-friendly.I wouldlike to placeon recordmy deep senseof appreciationto my post-graduate(M.D.)students,Dr. (Mrs.)U.B.VijayaLakshmiandDr. (Mrs.)Vidya DesaiSripad,whoseperiodicalacademicinteractionandfeedbackhavecontributedto the improvementof the biomedicaVclinicalaspectsin somechapters.I acknowledgethe helpof my friend,Dr. P.Ramanujam(Reader in English,AndhraLoyolaCollege,Vijayawada)for his helpandencouragementin revisingthe book. I expressmy gratitudeto Mr. ArunabhaSen, Director,Books & Allied (P) Ltd. Kolkata,for his wholeheartedsupportand constantencouragementin revisingthe bookin multicolour,and takingall the painsto bring it out to my satisfaction.I thank Mr. ShyamalBhattacharyafor his excellentpage-makingand graphics-workin the book.I am indebtedto Mr. PrasenjitHalderfor the coverdesignof this book. I thank my wife, Krishna Kumari, and my younger son, Amrutpani, for their constantsupport and encouragement.I am grateful to UppalaAuthor-PublisherInterlinks, Vijayawada,for sponsoringand supportingme to bring out this edition. Iiii] DT.U. SAIYANARAYANA
  • 6. Biochemistry The term Biochemistrywas introducedby Carl Neubergin 1903.Biochemistrybroadlydealswith the chemistrvof life and living processes.Thereis no exaggerationin the statement,'Thescopeof biochemistrg is asuastaslilb itself!' Everyaspectof life-birth,growth,reproduction,aginganddeath,involvesbiochemistry. For that matter,everymovementof life is packedwith hundredsof biochemicalreactions.Biochemistryis the mostrapidlydevelopingandmostinnovativesubjectin medicine.Thisbecomesevidentfromthe factthat over the years,the major shareof NobelPrizesearmarkedfor Medicineand Physiologyhasgoneto researchers engagedir: biochemistry. The disciplineof biochemistryservesas a torch light to trace the intricate complexicitiesof biology, besidesunravellingthe chemicalmysteriesof life.Biochemicalresearchhasamplydemonstratedthat all living thingsarecloselyrelatedat the molecularlevel.Thusbiochemistryis the subjectof unity in the diversified living kingdom. Advancesin biochemistryhavetremendousimpacton humanwelfare,andhavelargelybenefitedmankind and their living styles.Theseincludethe applicationof biochernistryin the laboratoryfor the diagnosisof diseases.the products(insulin,interferon,€rowthhormoneetc.)obtainedfrom geneticengiineering,andthe possibleuseof genetherapyin the nearfuture. 0rganizationof the Book This texthook,comprising43 chapters,is orgianizedinto serrensecl:ionsin the heirarchicalorder of learninSbiochemistry. . SectionI dealswith the chemicalconstituentsof life-carbohydrates,lipids,proteinsandaminoacids, nucleicacidsandenzymes. . SectionII physiologicalchemistryincludesdigestionandahsorption,plasmaproteins,hemoglobinand prophyrins,andbiologicaloxidation. . SectionIII incorporatesall the metabolisms(carbohydrates,lipids,aminoacids,nucleotides,minerals) . Section[V covershormones,organfunctiontests,water,electrolyteandacid-basebalance,tissueproteins andtrodi'fluids,andnutrition. . SectionV is exclusivelydevotedto molecularbiologyandbiotechnology(DNA-replication,recombination, ar"lnrepair,transcriptionandtranslation,regulationof geneexpression,recombinantDNAandbiotechnology) . SectionVI givesrelevantinformation on current topics such a^shuman genomeproject,genetherapy, bioirrtormatics,prostaglandins,diabetes,cancer,AIDSetc. . Section VII dealswith the basic aspectsfor learning and understandingbiochemistry (bioorganic chenristry',hiophysicalchemistrytoolsof biochemistry,genetics,immunology). Each chapterin this book is carefully craftedwith colour illustrations, headingsand subheadingsto facilitatequickunderstanding.Theimportantapplicationsof biochemistryto humanhealthanddiseaseareput togetherasbiomedical/clinicalconcepts.Iconsare usedat appropriateplacesto serveas 'landmarks'. The origins of biochemicalwords, confusablesin biochemistry,practicalbiochemistryand clinical biochemistrylaboratory,givenin the appendixare novelfeatures. Thebriokis so organizedasto equipthe readerswith a comprehensiveknowledgeof biochemistry. Iiu]
  • 7. Gontents SECTION ONE ChemicalConstituentsof Life 1 > Biomoleculesandthecell 2 > Carbohydrates 3 > Lioids 4 > Proteinsandaminoacids 5 > Nucleicacidsandnucleotides 6 > Enzymes 7 > Vitamins SECTION TWO PhysiologicalBiochemistry B > Digestionandabsorption 9 > Plasmaoroteins 10 > Hemoglobinandporphyrins 11 > Biologicaloxidation SECTION THBEE q3 > Metabolismofcarbohydrates *4 > Metabolismoflioids F-, Metabolismofaminoacids 16 > Int6grationofmetabolism 17 > Metabolismofnucleotides 1B > Mineralmetabolism SECTION FOUR ClinicalBiochemistrvand Nutrition 19 > Hormones 20 > Organfunctiontests 21 > Water,electrolyteand acid-basebqlance 22 > Tissueproteinsandbodyfluids 23 > Nutrition- SECTION FIVE MolecularBiologyand Biotechnology 24 > DNA-replication,recombinationandrepair523 25 > Transcriotionandtranslation 542 26 > Regulationofgeneexpression 566 27 b RecombinantDNAandbiotechnology578 sEcTtcN stx Current Topics 28 > Humangenomeproject 619 29 > Genetherapy 625 30 F Bioinformatics 634 31 p 'lvletabolismofxenobiotics(detoxification)638 32 >' Prostaglandinsandrelatedcompounds644 33 > Biologicalmembranesandtransport 650 34 b Freeradicalsandantioxidants 655 35 > Environmentalbiochemistry 662 36 l" Insulin,glucosehomeostasis, 3 9 28 43 69 85 176 165 182 196 221 anddiabetesmellitus Cancer 669 58s37> 38> Acquiredimmunodeficiency syndrome(AIDS) 695 241 244 285 330. 380 387 403 427 453 SECTION SEVEN Basicsto LearnBiochemistrv 39 > Introductiontobioorganicchemistry 40 > Overviewofbiophysicalchemistry 41 > Toolsofbiochemistrv 42 > lmmunology 43 > Genetics APPENDICES AnswerstoSelf-assessmenlExercises I Abbreviationsusedinthisbook' ll Greekalphabets lll Originsolimportantbiochemicalwords lV Commonconfusablesinbiochemistry V Practicalbiochemistry-principles Vl Clinicalbiochemistrylaboratory INEEX 703 708 719 732 737 745 751 756 tJt 760 764 770 773 468 487 502
  • 8. fi Protuinsand Amino acids 4: Nucleicacidsand Nucleotides 69
  • 9. BflomnoXeeutrssaildthsCelll -l- hu living matter is composedof mainly six I elements-carbon, hydrogen, oxygenl nitrogen, phosphorus and sulfur. Theseelements togetherconstituteabout 90% of the dry weight of the human body. Severalother functionally importantelementsare also found in the cells. Theseinclude Ca, K, Na, Cl, Mg, Fe,Cu, Co, l, Zn, F, Mo and Se. earbon-a unique element of life Carbonis the most predominantand versatile elementof life. lt possessesa unique propertyto form infinite number of compounds. This is attributedto the ability of carbon to form stable covalentbonds and C-C chains of unlimited length. lt is estimated that about 90% of compounds found in living system invariably contain carbon. Ghemical molecules of li#e Life is composed of lifeless chemical molecules. A single cell of the bacterium, Escherichiacoli containsabout 6.000 different organiccompounds.lt is believedthat man may contain about 100,000 different types of moleculesalthough only a few of them have been characterized. Sornpiex *riomoleeules The organiccompoundssuchasamino acids, nucleotidesand monosaccharidesserve as the monomeric unitsor building blocksof complex biomolecules-proteins,nucleicacids(DNA and RNA) and polysaccharides,respectively.The important biomolecules(macromolecules)with their respective building blocks and major functions are given in Table 1.1. As regards lipids, it may be noted that they are not biopolymers in a strict sense,but majority of them contain fatty acids. Structural heirarehy off asn organisnl The macromolecules(proteins,Iipids,nucleic acidsand polysaccharides)form supramolecular assemblies(e.g. membranes)which in turn organize into organelles,cells, tissues,organs and finally the whole organism. 3
  • 10. BIOCHEMISTFIY Biomolecule Buildingblock (repeatingunit) Major functions 1. Protein Aminoacids 2. Deoxyribonucleicacid(DNA) Deoxyribonucleotides Ribonucleotides3. Ribonucleicacid(RNA) 4. Polysaccharide(glycogen)Monosaccharides(glucose) Fundamentalbasisofstructureand functionofcell(staticanddynamicfunctions). fl_eq_o_sitoryo.l.!9199iFryi{9l1llgt Essentiallyrequiredlorproteinbiosynthesis. Storageformofenergytomeetshortterm demands. 5. Lipid Fattyacids,glycerol Storagetormofenergytomeetlongterm demands;structuralcomponentsofmembranes. Chem*ca! composition of man The chemicalcompositionof a normal man, weighing 65 kg, is given in Table 1.2.Water is the solventof life and contributesto more than 60"h of the weight. This is followed by protein (mostlyin muscle)and lipid (mostlyin adipose tissue).The carbohydratecontent is rather low which is in the form of glycogen. The cell is the structuraland functional unit of life. ft may be also regardedas the basic unit of hiological activity. The concept of cell originated from the contributionsof Schleidenand Schwann(1838). However, it was only after 1940, the complexitiesof cell structurewere exposed. Constituent Percent(7") Weight (kg) Prokaryotic and eukaryotic cells The cells of the living kingdom may be divided into two categories 1. Prokaryotes(Creek: pro - before;karyon- nucleus)lacka well definednucleusand possess relatively simple structure.These include the variousbacteria. 2. Eukaryotes(Greek: eu-true; karyon- nucleus)possessa well definednucleusand are more complex in their structureand function. The higher organisms(animalsand plants)are composedof eukaryoticcells. A comparisonof the characteristicsbetween prokaryotesand eukaryotesis listedin Table 1.3. The human body is composedof about 1014 cells.There are about 250 typesof specialized cel{s in- the human body'G.g. erythrocytes, nerve-cells, muscle cells, B cells of pancreas. An eukaryoticcell is generally10 to 100 pm in diameter. A diagrammatic representation of a typical rat liver cell is depicted in Fig.I.t. The plant cell differsfrom an animalcell by possessinga rigid cell wall (mostlycomposedof cellulose)and chloroplasts.The latter are the sitesof photosynthesis. Water Protein Lipid Carbohydrate Minerals 61.6 17.0 13.8 6.1 40 11 I '| 4
  • 11. Chapter 1 : BIOMOLECULESAND THE CELL Characteristic Prokaryotic cell Eukaryoticcell 1. Size Small(generally1-10pm) Large(generally10-100pm) 2. Cellmembrane Cellisenvelopedbyaflexibleplasmamembrane Distinctorganellesarefound (e.9.mitochondria,nucleus,lysosomes) 3. Sub-cellular organelles 4, Nucleus Notwelldefined;DNAisfound asnucleoid,histonesareabsent Nucleusiswelldefined,surroundedbya membrane:DNAisassociatedwithhistones 5. Energymetabolism Mitochondriaabsent,enzymesof energymetabolismboundto Enzymesolenergymetabolismarelocated inmitochondria membrane 6. Celldivision 7. Cytoplasm Usuallyfissionandnomitosis Mitosis 0rganellesandcytoskeleton absent Containsorganellesandcytoskeleton (anetworkoftubulesandfilaments) The cell consistsof well definedsubcellular organelles,envelopedby a plasma membrane. By differential centrifugation of tissue homogenate, it is possible to isolate each cellular organelle in a relatively pure form (Refer Chapter 41). The distribution of major enzymes and metabolic pathways in different cellular organelles is given in the chapter on enzymes (Refer Fig.6.6). The subcellular organellesare briefly describedin the following pages. Nucleus Nucleus is the largest cellular organelle, surroundedbv a double membrane nuclear envelope.The outer membraneis continuous with the membranesof endoplasmicreticulum. At certainintervals,the two nuclearmembranes have nuclearporeswith a diameterof about 90 nm. Theseporespermit the free passageof the products synthesizedin the nucleus into the surrounding cytoplasm. Roughendoplasmicreticulum Golgiapparatus Lysosome Mitochondrion Plasmamembrane Vacuole Ribosomes Peroxisome Cytoskeleton Cytosol Coatedpits Ftg. 1.1: Diagrammaticrepresentationof a nt liverell.
  • 12. BIOCHEMISTF|Y Nucleus contains DNA, the repository of genetic information. Eukaryotic DNA is associatedwith basic protein (histones)in the ratio of 1 : 1, to form nucleosomes.An assembly of nucleosomesconstituteschromatin fibres of chromosomes(Creek'.chroma - colour; soma- body). Thus, a single human chromosomeis comoosedof abouta million nucleosomes.The number of chromosomes is a characteristic feature of the species. Humans have 46 chromosomes,compactlypackedin the nucleus. The nucleusof the eukaryoticcell containsa dense bodv known as nucleolus.lt is rich in RNA, particularlythe ribosomal RNA which entersthe cytosolthrough nuclearpores. The ground materialof the nucleus is often referredto as nucleoplasm.lt is rich in enzymes such as DNA polymerases and RNA polymerases.To the surpriseof biochemists,the enzymes of glycolysis,citric acid cycle and hexose monophosphateshunt have also been detectedin the nucleoplasm. Mitochondria The mitochondria (Creek'. mitos- thread; chondros- granule) are the centres for the cellularrespirationand energymetabolism.They are regarded as the power housesof the cell with variablesize and shape.Mitochondriaare rod-like or filamentousbodies, usuallv with dimensions of 1.0 x 3 pm. About 2,0O0 mitochondria,occupyingabout 1/5thof the total cell volume,are presentin a typicalcell. The mitochondriaare comoosedof a double membrane system. The outer membrane is smooth and completelyenvelopsthe organelle. The inner membrane is folded to form cristae (Latin- crests)which occupy a larger surface area. The internal chamber of mitochondriais referred to as matrix or mitosol. The componentsof electron transportchain and oxidative phosphorylation (flavoprotein, cytochromesb, c1, C, a and a3 and coupling factors)are buried in the inner mitochondrial membrane.The matrixcontainsseveralenzvmes concerned with the energy metabolism of carbohydrates,lipidsandaminoacids(e.g.,citric acid cycle, p-oxidation).The matrix enzymes also parlicipate in the synthesisof heme and urea. Mitochondria are the principal producers of ATP in the aerobic cells. ATP, the energy currency,generatedin mitochondriais exported to all partsof the cell to provideenergyfor the cellularwork. The mitochondrialmatrixcontainsa circular double stranded DNA (mtDNA), RNA and ribosomes.Thus,the mitochondriaareequipped with an independent protein synthesizing machinery.It is estimatedthat about 10% of the mitochondrial oroteins are produced in the mitochondria. The structureand functionsof mitochondria closely resemble prokaryotic cells. lt is hypothesizedthat mitochondria have evolved from aerobicbacteria.Further,it is believedthat duringevolution,the aerobicbacteriadeveloped a symbiotic relationship with primordial anaerobiceukaryoticcellsthat ultimatelyled to the arrival of aerobiceukaryotes. Endoplasmic reticulum The network of membraneenclosedspaces that extends throughout the cytoplasm constitutesendoplasmicreticulum(ER).Someof these thread-like structuresextend from the nuclearporesto the plasmamembrane. A large portion of the ER is studded with ribosomesto give a granularappearancewhich is referred ro as rough endoplasmic reticulum. Ribosomes are the factories of protein biosynthesis. During the process of cell fractionation,roughERisdisruptedto form small vesiclesknown as microsomes.It may be noted that microsomesas such do not occur in the cell. The smoothendoplasmicreticulumdoes not containribosomes.lt is involvedin the synthesis of lipids (triacylglycerols,phospholipids,sterols) and metabolismof drugs,besidessupplyingCa'?. for the cellularfunctions. Golgi apparats,r$ Eukaryoticcells contain a unique clusterof membrane vesicles known as dictyosomes
  • 13. Chapter 1 : BIOMOLECULESAND THE CELL which, in turn, constituteColgi apparatus(or Colgi complex).The newly synthesizedproteins are handed over to the Colgi apparatuswhich catalysethe addition of carbohydrates,lipids or sulfatemoietiesto the proteins.Thesechemical modificationsare necessaryfor the transportof proteinsacrossthe plasmamembrane. Certainproteinsand enzymesareenclosedin membrane vesicles of Colgi apparatusand secreted from the cell after the appropriate signals.The digestiveenzymesof pancreasare oroducedin this fashion. Colgi apparatusare also involved in the membrane synthesis, particularly for the formation of intracellular organelles (e.g. peroxisomes,lysosomes). Lysosornes Lysosomesare sphericalvesiclesenveloped by a singlemembrane.Lysosomesare regarded as the digestivetract of the cell, sincethey are actively involved in digestion of cellular substances-namely proteins, lipids, carbo- hydratesand nucleic acids.Lysosomalenzymes are categorizedas hydrolases.Theseinclude the following enzymes(with substratein brackets) a-C lucosidase(glycogen) Cathepsins(proteins) Lipases(lipids) Ribonucleases(RNA) The pH of the lysosomalmatrixis moreacidic (pH< 5) than the cytosol (pH-7) and this facilitatesthe degradationof differentcompounds. The lysosomal enzymes are responsiblefor maintaining the cellular compounds in a dynamic stafe, by their degradationand recycling.The degradedproductsleavethe lysosomes,usually by diffusion, for reutilization by the cell. Sometimes,however,certain residualproducts, rich in lipidsand proteins,collectivelyknown as Iipofuscinaccumulatein the cell. Lipofuscinis the agepigmentor wear and tearpigmentwhich has been implicatedin ageingprocess. The digestiveenzymesof cellularcompounds are confinedto the lvsosomesin the bestinterest of the cell. Escapeof theseenzymesinto cytosol will destroythe functionalmacromoleculesof tne cell and result in many complications.The occurrence of several diseases(e.g. arthritis, musclediseases,allergicdisorders)hasbeenpartly attributedto the releaseof lysosomalenzymes. Feroxisomes Peroxisomes,also known as microbodies, are single membranecellularorganelles.They are spherical or oval in shape and contain the enzyme catalase.Catalaseprotectsthe cell from the toxic effectsof HrO, by converting it to HrO and Or. Peroxisomesare also involved in tne oxidation of long chain fatty acids (> C,s),and synthesisof plasmalogensand glycolipids.Plants contain glyoxysomes, a specialized type of BTOMED|eAL/ CLINICAL COIUCEPTS A liuing cell is a true representotiueof life with its own organizotionand specialized lunctions. Accumulotion oJ lipofuscin,a pigment rich in lipids and proteins, in the cell hasbeen implicated in ogeing process. Leokageof lysosomalenzymesinto the cell degrodesseuerolfunctional macromolecules and this may leod to certain disorders (e.9. arthritis). rq Zellweger syndrome is a rare diseose characterized by the absence of functional peroxisomes.
  • 14. E}IOCHEMISTF|Y peroxisomes, which are involved in the glyoxylate pathway. Peroxisome biogenesisdisorders (PBDs), are a Broup of rare diseasesinvolving the enzyme activities of peroxisomes. The biochemical abnormalitiesassociatedwith PBDs incluoe increasedlevelsof very long chain fatty acids (C2aand C26)and decreasedconcentrationsof plasmalogens.The most severeform of PBDsis Zellweger syndrome, a condition characterized by the absenceof functional peroxisomes.The victimsof this diseasemav die within one vear after birth. {iytosol and cytoskeleton The cellular matrix is collectively referredto as cytosol. Cytosol is basicallya compartment containing several enzymes/ metabolites and saltsin an aqueousgel like medium.More recent studies however, indicate that the cytoplasm actuallycontainsa complex network of protein filaments, spread throughout, that constitutes cytoskeleton.The cytoplasmicfilamentsare of three types- microtubules, actin filaments and intermediatefilaments.The filamentswhich are polymers of proteins are responsiblefor the structure,shapeand organizationof the cell. INTEGRATIOI{ OF CELLULAR FUNCTIONS The eukaryoticcells performa wide rangeof complex reactionsfunctionsto maintaintissues, and for the ultimatewell-beingof the whole organism. For this purpose, the various intracellularprocessesand biochemicalreactions are tightly controlledand integrated.Divisionof a cell intotwo daughtercellsis goodexampleof the orderlyoccurrenceof an integratedseriesof cellularreactions. Apoptosisis the programmedcell death or cell suicide. This occurs when the cell has fulfilled its biologicalfunctions.Apoptosismay be regardedas a natural cell deathand it differs from the cell death caused by injury due to radiation,anoxiaetc. Programmedcell death is a highly regulatedprocess. 1. 2. 3. Life is composed ol lifeless chemical molecules. The complex biomolecules, proteins, nucleic ocids (DNA and RNA), polysaccharidesand lipids are formed by the monomeric units amino acids,nucleotides,monosaccharidesand fotty acids,respectluely. The cell is the structuroland functional unit of life. The eukoryoticcell consisfsof well det'inedsubcellulororganelles,enuelopedin a plasma membrane. The nucleus contoinsDNA, the repositoryol genetic int'ormation.DNA, in association with proteins (histones),forms nucleosomeswhich,in turn, make up the chromosomes. The mitochondria qre the centresfor energymetobolism. Theyare the principalproducers of ATP which is exported to all parts of the cell to ptouide energylor cellular work. Endoplosmic reticulum (ER) ts the network of membrane enclosed spocesthat extends throughout the cytoplosm. ER studded with ribosomes, the factorles of protein biosynfhesis, ts relerred to as rough ER. Golgi opparatus sre a cluster of membrane uesiclesto uthich the newlg synthesizedproteins are handed ouer for t'urther processing ond export. Lysosomesare the digestiue bodiesol the cell, actiuely involued in the degradotion of cellular compounds. Peroxisomescontoln the enzymecatalosethat protects the cell lrom the toxic elfects of HrOr. The cellular ground motrix is referred to as cytosol which, in fact, is composed of a network ot' protein t'ilaments, the cytoskeleton. Theeukaryoticcellsperform a widerangeof complex lunctionsin a well coordinatedand integrated fashion. Apoptosis is the processol programmed cell death or cell suicide. 5. 6. 7.
  • 15. 1^ arbohydratesare the most abundantorganic - molecules in nature. They are primarily composedof the elementscarbon, hydrogen and oxygen.The name carbohydrateliterallymeans 'hydratesof carbon'.Someof the carbohydrates possessthe empiricalformula (C.H2O)nwhere n 3 3, satisfyingthat thesecarbohydratesare in fact carbonhydrates.However,thereare several non-carbohydratecompounds(e.g. acetic acid, C2HaO2;lacticacid,C3H6O3)which alsoappear as hydratesof carbon. Further, some of the genuine carbohydrates (e.g. rhamnohexose, C6H12O5ideoxyribose,C5H16Oa)do not satisfy the generalformula.Hencecarbohydratescannot be alwaysconsideredas hydratesof carbon. Carbohydrates may be defined as polyhydroxyaldehydes or ketones or compounds which produce them on hydrolysis. The term 'sugar' is applied to carbohydratessoluble in water and sweet to taste. #-ur*c;tEerEsof earbohydrates Carbohydratesparticipatein a wide rangeof functions 1. Theyarethe mostabundantdietarysource of energy (a Cal/S)for all organisms. 2. Carbohydratesare precursorsfor many organic compounds(fats,amino acids). 3. Carbohydrates(asglycoproteinsand glyco- lipids) participate in the structure of cell membraneand cellular functionssuch as cell growth, adhesionand fertilization. 4. They are structuralcomponentsof many organisms.Theseincludethe fiber (cellulose)of plants,exoskeletonof some insectsand the cell wall of microorganisms. 5. Carbohydratesalso serve as the storage form of energy(glycogen)to meetthe immediate energydemandsof the body. CLASSIFICATION OF GARBOHYDRATES Carbohydrates are often referred to as saccharides (Greek: sakcharon-sugar).They are broadlyclassifiedinto three major groups- monosaccharides, oligosaccharides and polysaccharides.This categorizationis basedon
  • 16. t0 BIOCHEMISTRY Monosaccharides(empiricalformula) AIdose Ketose Trioses(CgHoOg) Telroses(C+HoO+) Pentoses(CsHroOs) Hexoses(CoHrzOo) Heptoses(CzHr+Oz) Glyceraldehyde Erythrose Ribose Glucose Glucoheptose Dihydroxyacetone Erythrulose Ribulose Fructose Sedoheptulose the number of sugar units. Mono- and oligo- saccharidesare sweet to taste, crystalline in characterand soluble in water, hence thev are commonly known as sugars. FJtonosaccharides Monosaccharides(Greek: mono-one)are the simplestgroup of carbohydratesand are often referred to as simple sugars.They have the generalformula Cn(H20)n,and they cannot be further hydrolysed.The monosaccharidesare divided into differentcategories,based on the functionalgroupandthe numberof carbonatoms Aldoses : When the functional group in IH monosaccharidesis an aldehydel-C:oi, ,h"u are known as aldoses e.g. glyceraldehyde, glucose. Ketoses: When the functionalgroup is a keto lt -C:O.l group, they are referredto as ketoses e.g. dihydroxyacetone,fructose. Basedon the number of carbon atoms,the monosaccharidesare regarded as trioses (3C), tetroses (4C), pentoses (5C), hexoses (6C) and heptoses(7C).Thesetermsalongwith functional groupsare usedwhile namingmonosaccharides. For instance, glucose is an aldohexose while fructose is a ketohexose(Table 2,1). Thecommonmonosaccharidesand disaccha- rides of biological importanceare given in the Table 2.2. SSlgosaccharides Oligosaccharides(Creek: oligo-few) contain 2-1O monosaccharidemolecules which are liberatedon hydrolysis.Basedon the numberof monosaccharide units present, the oligo- saccharides are further subdivided to disaccharides,trisaccharidesetc. Polysace harides Polysacchari6ls(Creek:poly-many)are poly- mers of mondficcharide units with high mole- cular weight (up to a million).They are usually tasteless(non-sugars)and form colloids with water. The polysaccharidesare of two types- homopolysaccharidesand heteropolysaccharides. Stereoisomerismis an importantcharacterof monosaccharides. Stereoisomers are the compounds that have the same structural formulaebut differ in their spatialconfiguration. A carbon is said to be asymmetric when it is attached to four different atoms or groups. Ihe number of asymmetric carbon atoms (n) determines the possible isomers of a given compound which is equal to 2n. Clucose contains4 asymmetriccarbons,and thus has 16 tsomers. Glyeeraldehyde -tfu e ref erqlrt*e cff rb$hyd$'er'&€3 Clyceraldehyde(triose)is the simplestmono- saccharidewith one asymmetriccarbonatom. lt existsastwo stereoisomersand hasbeenchosen as the referencecarbohydrateio representthe structureof all other carbohvdrates.
  • 17. Ghapter 2 : CARBOHYDRATES 11 Trioses Glyceraldehyde Dihydroxyacetone Tetroses D-Erythrose Foundincellsasphosphate Foundincellsasphosphate i Widespread I Widespreadasaconstituentof I RNAandnucleotides i AsaconstituentofDNA : Producedduringmetabolism i Asaconstituentofglycoproteins i anogums i ls anintermediateinuronicacidpathway i Heartmuscle i --. --. -- --.. ---.. -.. -. --. Asaconstituentolpolysaccharides (starch,glycogen,cellulose)and disaccharides(maltose,lactose, sucrose).Alsofoundinfruits Asaconstituentoflactose (milksugar) Foundinplantpolysaccharides andanimalglycoproteins Fruitsandhoney,asaconstituent ofsucroseandinulin Foundinolants i Glyceraldehyde3-phosphateisanintermediate i inglycolysis i ttst-pnosphateisanintermediateinglycolysis ----t------..-..-.--...--- ForthestructureofRNAandnucleotide coenzymes(ATP,NAD+,NADP+) ForthestructureolDNA Itisanimportantmetaboliteinhexose monophosphateshunt Involvedinthefunctionofglycoproteins Excretedinurineinessenlialpentosuria Asaconstituentollvxollavinofheartmuscle The'sugarfuel'oflife;excretedinurinein diabetes.Structuralunitofcelluloseinplants Convertedtoglucose,failureleadsto galactosemia Forthestructureofpolysaccharides Itsphosphatesareintermediatesofglycolysis Its7-phosphateisanintermediateinhexose monophosphateshunt,andinphotosynthesis Pentoses D-Ribose D-Deoxyribose D-Ribulose D-Xylose L-Xylulose D-Lyxose Hexoses D-Glucose D-Galactose D-Mannose D-Fructose Heptoses D-Sedoheptulose Disaccharides Occurrence Biochemical importance Sucrose Lactose Asaconstituentofcanesugarand beetsugar,pineapple Milksugar Productofstarchhydrolysis, occursingerminatingseeds Mostcommonlyusedtablesugarsupplying calories Exclusivecarbohydratesourcetobreastfed infants.Lactasedeficiency(lactoseintolerance) leadstodianheaandflatulence Animportantintermediateinlhedigestionof starch Maltose
  • 18. 12 E}IOCHEMISTFIY H-C:O I H-C-OH cH2oH D-Glyceraldehyde H-C:O HO-C-H cH2oH L-Glyceraldehyde H-C:O I HO-C-H H-C-OH I HO-C-H HO-C-H cH2oH L-Glucose Fig.2.1 : DandL- formsof glucosecomparedwith D and L- glyceraldehydes (the reference carbohydrate). D" and L-isomers The D and L isomersare mirror imagesof each other. The spatialorientationof -H and -OH groups on the carbon atom (Cs for glucose)that is adjacentto the terminal primary alcohol carbon determineswhetherthe sugaris D- or L-isomer.lf the -OH group is on the right side,the sugaris of D-series,and if on the left side, it belongs to L-series.The structuresof D- and L-glucosebasedon the referencemono- saccharide, D- and L-glyceraldehyde (glycerose) are depicted in Fig.2.1. It may be noted that the naturallyoccurring monosaccharidesin the mammaliantissuesare mostlyof D-configuration.Theenzymemachinery of cells is specific to metaboliseD-seriesof monosaccharides. fn the medical practice, the term dextroseis used for glucosein solution. This is becauseof the dextrorotatorynature of glucose. Optlcal activity of sugars Optical activity is a characteristicfeature of compounds with asymmetric carbon atom. When a beam of polarized light is passed througha solutionof an optical isomer,it will be rotated either to the right or left. The term dextrorotatory (+) and levorotatory (-) are used to compoundsthat respectivelyrotatethe plane of polarizedlight to the right or to the left. An optical isomer may be designatedas D(+), D(-), L(+)and L(-) basedon its structural relation with glyceraldehyde.lt may be noted that the D- and L-configurationsof sugarsare primarily based on the structure of glyceraldehyde,the optical activitieshowever, may be different. Racemicmixture : lf D- and L-isomersare presentin equal concentration,it is known as racemicmixtureor DL mixture.Racemicmixture does not exhibit any optical activity, since the dextro- and levorotatorv activities cancel each other. Configuration of D-aldoses The configuration of possible D-aldoses startingfrom D-glyceraldehydeis depicted in Fig.2.2. This is a representation of Killiani- Fischersynthesis,by increasingthe chain length of an aldose,by one carbon at a time. Thus, startingwith an aldotriose(3C),aldotetroses(4C), aldopentoses(5C) and aldohexoses(6C) are formed. Of the 8 aldohexoses,glucose,mannose and galactoseare the most familiar. Among these, D-glucose is the only aldose mono- saccharidethat predominantlyoccurs in nature. Gonfiguration of D-ketoses Startingfrom dihydroxyacetone(triose),there are five keto-sugarswhich are physiologicallr important.Their structuresare given in Fig,2.3 Epimers ff two monosaccharides differ from eac- other in their configuration around a singk specificcarbon (otherthan anomeric)atom. L*ei are referred to as epimersto each orher '.Fig,21 For instance, glucoseand galactose are efilwl with regardto carbon 4 (Ca-epimers- -^:i 's they differ in the arrangementof -OH g.'ELcr Ca. Clucose and mannose are epi-'e--' q drl regardto carbon 2 (C2-epimers). The interconversionof epimers e - I r::r'e to galactose and vice versai s i - -^,'- a* H-C:O I H-C-OH I HO-C-H I H-C-OH I H-Q-OH I cHzoH D-Glucose
  • 19. Ghapter 2 : CABBOHYDFATES 13 Aldotriose (3c) Aldotetroses (4c) cHo I HOCH I Aldo toses HOCH ) I HCOH I cH2oH D-Lyxoee cHo HOCH I I Aldo- HOCH HOCH hexoses HoCH noCH (6c) tl HCOH HCOH tt cHzoH cHzoH D-Galactose D-Talose 'l t- cHo HOCH I HCOH HCOH cH2oH D-Arabinose / JT cHo cHo HCOH HOCH rl HOCH HOCH tl HCOH HCOH tl HCOH HCOH ll cH2oH cH2oH D-Glucose D-Mannose HCOH I HCOH cH2oH D-Ribose / JT cHo cHo tl HCOH HOCH HCOH HCOH tl HCOH HCOH tl HCOH HCOH ll cH2oH cH2oH D-Allose D-Altrose cHo HCOH cHo I HCOH I HCOH I HOCH I HCOH cH2oH D-Gulose cHo I HCOH cHo I HOCH I HCOH I HOCH HCOH I cH2oH D-ldose cHo I HCOH I cH2oH D-Erythrose D.Threooe cHo I HCOH I HOCH I HCOH cH2oH D-Xylose I / / *+ Fig.2.2 : ThestructuralrelationshipbetweenD-aldosesshownin Fischerprojection. (TheconfigurationaroundC2(ed) distinguishesthemembersof eachpair). epimerization, and a group of enzymes- namely-epimerases catalysethis reaction. Enantiomers Enantiomers are a special type of stereoisomers that are mirror images of eachother. The two membersare designatedas D- and L-sugars.Enantiomersof glucose are depicted in Fig.2.5. Majority of the sugarsin the higher animals (includingman) are of D-type (Fig.2.5'1. The term diastereomersis used to represent the sfereoisomers that are not mirror imagesof one another. For a better understanding structure, let us consider the hemiacetals and hemiketals, producedwhen an aldehydeor a with alcohol. of glucose formation of respectively ketone reacts
  • 20. 14 E}IOCHEMISTRY ?H2oH C:O I cH2oH Dlhydroxyacetone cH2oH I C:O I HOCH HCOH I cH2oH D-Xylulose cH20H I C:O HCOH HCOH I cH2oH D-Ribulose cH2oH I C:O HOCH I HCOH I HCOH I cH2oH D-Fructose cH2oH I C:O I HOCH I HCOH I HCOH I HCOH I cH2oH D-Sedoheptulose Fig.2.3 : Structuresof ketosesof physiologicalimportance. ,H nt-C.1^ + R2-oH l- Rr- LJ Aldefry<b Alcohol Hemiacetal The hydroxyl group of monosaccharidescan react with its own aldehydeor keto functional group to form hemiacetaland hemiketal.Thus, the aldehydegroup of glucoseat C1 reactswith alcohol group at C5 to form two typesof cyclic hemiacetalsnamely a and B, as depicted in Fig.2.6. The configuration of glucose is conveniently represented either by Fischer formulaeor by Haworth projectionformulae. Fyranose and furanose structures Haworth projectionformulaeare depictedby a six-memberedring pyranose(basedon pyran) or a five-memberedring furanose (based on furan).The cyclic formsof glucoseare known as a-D-glucopyranose and c-D-glucofuranose (Fig.2.V. Anomers-nrutarotation The a and p cyclic forms of D-glucose are known as anomers.Thev differ from each other in the configurationonly around C1 known as anomericcarbon(hemiacetalcarbon).In caseof o anomer,the -OH group held by anomeric carbon is on the opposite side of the group -CH2OH of sugarring. The reverseis true for B-anomer.The anomersdiffer in certainphysical and chemical properties. Mutarotation : The a and p anomers of glucose have different optical rotations. The specific optical rotation of a freshly prepared glucose(c anomer)solutionin water is +112.2o which gradually changes and attains an equilibriumwith a constantvalue of +52.7". ln the presenceof alkali, the decreasein optical rotation is rapid. The optical rotation of p-glucose is +18.7o. Mutarotation is defined as the change in the specific optical rotation representing the interconversion of u and p H-C:O I H-C-OH I HO-C-H I HO- C -H H-C-OH I cH2oH D-Galactose H-C:O I H-C-OH I HO-C-H I H .C-OH I H-C-OH I CHzOH D-Glucose H-C=O I HO-C-H I HO-C-H I H-C-OH I H-C-OH I cH2oH D-Mannose H I C:O I f{ c-oH I HC-C-H i-l- c-oH H-C-OH I t"1-c-H HO H O=C HO_C- H I H-C- Cl-i I HO-C-H I HO-C- Fl I H-C- ii I OH Fig.2,4: Structuresof epimers(glucoseand galactose are Co-epimerswhileglucoseand mannoseare C2-epimers). L-Glucose D-Glucose H9.2.5 : Enantiomers(mirrorimages)ofglucose.
  • 21. t5 Ghapter 2 : CARB I cH20H o'D'Glucose (+ 112.2" fil H6?H o-D-GlucoPYranose 1 H-C:O I H-C-OH I HO-C-H I H-C-OH tc H-C-OH I cH2oH D-Glucose (aldehYdeform) l/A H6?H HOH D-Glucose (aldehydeform,acYclic) iHron ftD-Glucose (+18.7-) (B) HOH FD-GlucoPYranose cH20H forms of D'glucose to an equilihrium mixture' Mutarotationdepictedin Fig'2'6, is summartzeo below. cx-D-Clucose# Equilibriummixture# B-D-Clucose + 112.2" + 52.7" + 18.7" (Specificoptical rotation tctl2p0) The equilibrium mixture contains 63o/" p-anomer and 36"/ocl-anomer of glucose with Fig.2.7: Structurcofglucose-pyranose andfuranosetorms' HOH cr-D-GlucoPYranose cH20H t- H-C-OFi OH HOH cr-D-Glucofuranose 17oopen chainform. ln aqueoussolution'the p forrn 'i, more predominant due to its stable conformation.The cr and p formsof glucoseare interconvertiblewhich occurs through a linear form. The latter, as such, is present in a" insignificantquantitY. Mutarotation of fructose z Frur' exhibits mutarotation.ln case or pyranose ring (six-memberqd' furanose(five-membered)'o' is attained.And fruqt' rotation of -92)2. Ihe conv' to levor ':ut" :;r' on is kn, anome' in alkalir When gt. severalhours,
  • 22. chapter 2 : CAFIBoHYDFATES 15 I cH2oH cr-D-Glucose (+ 112.2") 1 H-C=C) I H-C-OH I HO-C-H I H-C-OH l5 H-C-OH cH2oH D-Glucose (aldehydeform) HOH D-Glucose (aldehydeform,acyclic) forms of D-glucose to an equilibrium mixture. Mutarotationdepictedin Fi9.2.6, is summarized below. s-D-Clucose# Equilibriummircture# p-D-Glucose + 112.2" + 52.7" + 18.7o (Specificoptical rotation talf;) The equilibrium mixture contains 63"/" p-anomer and 36h cl-anomerof glucosewith cr-D-Glucopyranose 17oopen chain form. In aqueoussolution,the p form is more predominant due to its stable conformation.The s and p formsof glucoseare interconvertiblewhich occurs through a linear form. The latter, as such, is present in an insignificantquantity. Mutarotation of fructose : Fructose also exhibits mutarotation.ln case of fructose,the pyranose ring (six-membered)is converted to furanose(five-membered)ring,till an equilibrium is attained.And fructosehas a specificoptical rotationof -92" at equilibrium. The conversion of dextrorotatory (+) sucrose to levorotatory fructose is explained under inversionof sucrose(seelater in this chapter). REACTIONS OF MONOSACCHARIDES Tautomerization or enolization The processof shiftinga hydrogenatom from one carbon atom to anotherto produce enediols is known as tautomerization. Sugarspossessing anomericcarbon atom undergotautomerization in alkalinesolutions. When glucoseis kept in alkalinesolutionfor severalhours,it undergoesisomerizationto form HOH o-D-Glucopyranose pD-Glucopyranose Fig. 2.6 : Mutarotation of glucose representing a and p anomers (A) Fischer projections (B) Haworth projections. Fig.2.7 : Structureof glucose-pyranose and furanoseforms. 20H cH2oH H c-D-Glucofuranose
  • 23. 16 BIOCHEMISTFIY H n-C-ot H-C:O ( I H- -OH HO-( HO-( R Enediol (common) Fig.2.8 : Formationof a commonenediolfrom glucose,fructoseandmannose {fr,f,o,F|F|lPffi:!lo.t|tfr,ft:PI:Is?Iboncolnmonstnftar:?l,l D-fructose and D-mannose. This reaction- known as the Lobry de Bruyn-von Ekenstein transformatiorr-results in the formation of a common intermediate-namely enediol--$or all the three sugars,as depicted in Fig.2.8. Theenediolsare highlyreactive,hencesugars in alkaline solution are powerful reducing agents. ft+r,.luleFr'.lgr!s.lFeFtlsF The sugarsare classifiedas reducingor non- reducing.The reducingpropertyis attributedto the free aldehyde or keto group of anomeric carbon. ln the laboratory, many testsare employed to identify the reducing action of sugars.These incfude Benedict's test, Fehling's test, Barfoed's tesf etc. The reduction is much more efficient in the alkaline medium than in the acid medium. The enediolforms(explainedabove)or sugars reduce cupric ions (Cu2+)of copper sulphate to cuprous ions (Cu+), which form a yellow precipitate of cuprous hydroxide or a red precipitate of cuprous oxide as shown next. t2H2O+ CueO{- 2Cu(OH) It may be noted that the reducing property of sugarscannothelp for a specificidentificationof any one sugar,since it is a generalreaction. 0xida*iern Depending on the oxidizing agent used, the terminal aldehyde (or keto) or the terminal alcoholor both the groupsmay be oxidized.For instance,considerglucose: 1. Oxidation of aldehydegroup (CHO ------> COOH) resultsin the formationof gluconicacid. 2. Oxidation of terminal alcohol group (CH2OH------+COOH) leadsto the production of glucuronicacid. Reduetion When treatedwith reducing agentssuch as sodiumamalgam,the aldehydeor keto groupof monosaccharideis reduced to corresponding alcohol, as indicatedby the generalformula : H H-C:O H-C-Ol-t I RR The important monosaccharidesand their correspondingalcoholsare given below. D-Glucose D-Galactose------+D-Dulcitol D-Mannose ------+D-Mannitol D-Fructose --) D-Mannitol+ D-Sorbitol D-Ribose -+ D-Ribitol Sorbitol and dulcitol when accumulate in tissuesin large amounts cause strong osmotic effectsfeadingto swelling of cells,and certain pathologicalconditions.e.g.cataract,peripheral neuropathy,nephropathy.Mannitol is usefulto reduce intracranialtensionbv forced diuresis.
  • 24. Ghapter 2 : CAFIBOHYDRATES 17 H-C--O I H-C-OH I HO-C-H I H-C-OH I H-C-OH I cH2oH D-Glucose H-C:O I H-C:O I cH20H Hydrorymethylfurfural H-C:O I Formation of esters The alcoholic groups of monosaccharides may be esterified by non-enzymatic or enzymatic reactions. Esterificationof carbo- hydrate with phosphoric acid is a common reaction in metabolism.Glucose 6-phosphate and glucose 1-phosphateare good examples. ATP donates the phosphate moiety in ester formation. lClycoside bond formation (see below) and mutarotation(discussedalready) may also be referred to, as these are also the characteristic propertiesof monosaccharides.l GLYCOSIDES Glycosidesare formed when the hemiacetal or hemiketal hydroxyl group (of anomeric carbon)of a carbohydratereactswith a hydroxyl group of another carbohydrate or a non- carbohydrate (e.g. methyl alcohol, phenol, glycerol). The bond so formed is known as glycosidic bond and the non-carbohydrate moiety (when present)is referredto as aglycone. The monosaccharidesare held together by glycosidic bonds to result in di-, oligo- or polysaccharides(seelaterfor structures). H-C=O I _ + HrN-NH-CuHu H-C-OH R Glucose Phenylhydrazine H-C:N-NH-CoHs I H-C-OH I R Glucohydrazone l7-H2N-NH-C6H' I H-C:N-NH-CoHs I C:N-NH-CoHs I R Glucosazone Fig.2.10: A summatyof osazonefomation H-C-OH C----r tlll H-C-OH Conc.HeSoo H-Q L I rH I U H-C-OH '1 H-C I CHrou 3H2o H-d---l D-Ribose Furfural Fig.2.9 : Dehydration of monosaccharides with concentrated H "SO o. Dehydration When treatedwith concentratedsulfuricacid, monosaccharidesundergodehydrationwith an eliminationof 3 water molecules.Thus hexoses give hydroxymethylfurfuralwhile pentosesgive furfural on dehydration (Fi9.2.9).Thesefurfurals can condense with phenolic compounds (a-naphthol)to form coloured products.This is the chemical basisof the popular Molisch test. In case of oligo- and polysaccharides,they are firsthydrolysedto monosaccharidesby acid,and this is followed by dehydration. Osazone formation Phenylhydrazinein acetic acid, when boiled with reducing sugars, forms osazones in a reactionsummarizedin Fig,2,10. As is evident from the reaction, the first two carbons (Cr and C2) are involved in osazone formation. The sugars that differ in their configuration on these two carbons give the same type of osazones,since the differenceis maskedby bindingwith phenylhydrazine.Thus glucose,fructoseand mannosegive the same type (needle-shaped)osazones. Reducingdisaccharidesalso give osazones- maltose sunflower-shaped,and lactose powder- puff shaped. (RrcprcsentsCrto Crofglucose).
  • 25. t8 BIOCHEMISTRY Naming of glycosidic bond : The nomenclatureof glycosidic bonds is based on the Iinkagesbetweenthe carbon atomsand the status of the anomeric carbon (o or p). For instance,lactose-which is formed by a bond between C1 of p-galactoseand Ca of glucose- is namedas 0(.1-+ 4) glycosidicbond. The other glycosidicbonds are describedin the structure of di- and polysaccharides. Physiologieally important glycosides 1. Glucovanillin (vanillin-D-glucoside)is a naturalsubstancethat impartsvanilla flavour. 2. Cardiac glycosides(steroidalglycosides): Digoxin and digitoxin contain the aglycone steroidand they stimulatemusclecontraction. 3. Streptomycin, an antibiotic used in the treatmentof tuberculosisis a glycoside. 4. Ouabain inhibits Na+- K+ ATPase and blocksthe activetransportof Na+. DERIVATIVESOF MONOSACCHARIDES Thereare severalderivativesof monosaccha- rides, some of which are physiologically important 1. Sugar acids : Oxidation of aldehyde or primaryalcoholgroupin monosaccharideresults in sugaracids.Cluconic acid is producedfrom glucose by oxidation of aldehyde (C1 group) whereasglucuronicacid is formedwhen primary alcoholgroup (C6)is oxidized. 2. Sugar alcohols (polyols) : They are producedby reductionof aldosesor ketoses.For instance,sorbitol is formed from glucose and mannitol from mannose. 3. Alditols : The monosaccharides, on reduction,yield polyhydroxyalcohols,known as alditols. Ribitol is a constituent of flavin coenzymes; glycerol and myo-inositol are componentsof lipids.Xylitol is a sweetenerused in sugarlessgumsand candies. 4. Amino sugars : When one or more hydroxyl groups of the monosaccharidesare replaced by amino groups, the products formed are amino sugarse.g. D-glucosamine, D-galactosamine.They are present as consti- tuentsof heteropolysaccharides. The amino groups of amino sugars are sometimes acetylated e.g. N-acetyl D-gluco- samrne. N-Acetylneuraminic acid (NANA) is a derivativeof N-acetylmannoseand pyruvicacid. It is an important constituentof glycoproteins and glycolipids.The term sialicacid is usedto include NANA and its other derivatives. Certain antibiotics contain amino sugars which may be involvedin the antibioticactivity e.g. erythromycin. 5. Deoxysugars: These are the sugarsthat contain one oxygen lessthan that presentin the parent molecule. The groups -CHOH and -CH2OH become-CH2 and -CH3 due to the absenceof oxygen.D-2-Deoxyriboseis the most important deoxysugarsince it is a structural constituentof DNA (in contrastto D-ribose in RNA). 6. L-Ascorbic acid (vitamin C) : This is a water-solublevitamin, the structureof which closelyresemblesthat of a monosaccharide. The structuresof selected monosaccharide derivativesare depictedin Fig.2.l1. Among the oligosaccharides,disaccharides are the most common (Fig.2,l2).As is evident from the name, a disaccharideconsistsof two monosaccharideunits(similaror dissimilar)held together by a glycosidic hond. They are crystalline,water-solubleand sweetto taste.The disaccharidesare of two types '1. Reducingdisaccharideswith free aldehyde or keto group e.g. maltose, lactose. 2. Non-reducingdisaccharideswith no free aldehyde or keto group e.g. sucrose,trehalose. Maltose Maltose is composed of two a-D-glucose unitsheldtogetherby cl (1 -+ 4) glycosidicbond. Thefreealdehydegrouppresenton C1of second glucoseanswersthe reducingreactions,besides
  • 26. Ghapter & : CAFIBOHYDRATES 19 H-C:O I H-C-OH I HO-C-H I H-C-OH I H-C-OH I COOH D-Glucuronicacid OHH D-2-Deoxyribose cH2oH I H-C-OH I cH2oH Glycerol H NHz D-Glucosamine HOH myo-lnositol H3C-C--HN HOH N-Acetylneuraminicacid Fiq.2.11 : Structuresol monosaccharidederivatives(selectedexamples). the osazone formations (sunflower-shaped). Maltosecan be hydrolysedby dilute acid or the enzyme maltaseto liberate two moleculesof cr-D-glucose. ln isomaltose,the glucose units are held togetherby o (1 --+6) glycosidiclinkage. Cellobioseis another disaccharide,identical in structurewith maltose,exceptthat the former has p (1 -r 4) glycosidiclinkage.Cellobioseis formedduringthe hydrolysisof cellulose. Suoroee Sucrose(canesugar)isthe sugarof commerce, mostlyproducedby sugarcane and sugarbeets. Sucrose is made up of a-D-glucose and p- D-fructose.The two monosaccharidesare held togetherby a glycosidicbond (a1-+ B2),between Cj of c-glucose and C2 of B-fructose.The reducing groups of glucose and fructose are involvedin glycosidicbond, hencesucroseis a non-reducing sugar,and it cannot form osazones. Sucroseis the major carbohydrateproduced in photosynthesis. lt is transported into the storageorgansof plants (such as roots, tubers and seeds).Sucroseis the mostabundantamong the naturallyoccurring sugars.lt has distinct advantagesover other sugarsas a storageand transoortform. This is due to the fact that in sucrose,both the functional groups (aldehyde and keto)are held togetherand protectedfrom oxidativeattacks. Sucrose is an important source of dietary carbohydrate.lt is sweeter than most other commonsugars(exceptfructose)namelyglucose, lactoseand maltose.Sucroseis employed as a sweeteningagentin food industry.The intestinal enzyme-sucrase-hydrolysessucroseto glucose and fructosewhich are absorbed. F-aetsse Lactoseis more commonlv known as milk sugarsinceit is the disaccharidefound in milk. Lactoseis composed ol p-D-galactoseand B-D- glucoseheld togetherby 0 (1 -r a) glycosidic bond.The anomericcarbonof C1glucoseis free, hence lactoseexhibits reducing propertiesand formsosazones(powder-puffor hedgehogshape). Lactose of milk is the most important carbohydratein the nutritionof young mammals. It is hydrolysedby the intestinalenzyme lactase to glucoseand galactose. lnversion ef suerose Sucrose,as such is dextrorotatory(+66.5o). But, r,r,hen hydrolysed, sucrose becomes levorotatory(-28.2"). The processof change in optical rotation from dextrorotatory (+) to levorotatory(-) is referredto as inversion.The
  • 27. BIOCHEMISTF|Y HOH Glucose Fructose Sucrose (a-D-glucosyl(1 --+2)p-D-fructose) Galactose Lactose (p-D-galactosyl(1 -+ a)p-D-glucose) Fig. 2.12 : Structures of disaccharides -maltose, sucrose and lactose. hydrolysed mixture of sucrose, containing gfucoseand fructose, is known as invert sugar. The processof inversionis explainedbelow. Hydrolysisof sucroseby the enzyme sucrase (invertasdor dilute acid liberatesone molecure each of glucoseand fructose.ft is postulatedthat sucrose (dextro) is first split into a-D- glucopyranose(+52.5") and p-D-fructofuranose, both being dextrorotatory. However, p-D- fructofuranoseis lessstableand immediatelygets converted to p-D-fructopyranose which is stronglylevorotatory(-92"). The overalleffectis that dextro sucrose (+66.5") on inversion is converted to levo form (28.2'. Polysaccharides(or simply glycans)consistof repeat units of monosaccharides or their derivatives,held togetherby glycosidicbonds. Theyareprimarilyconcernedwith two important functions-structural,and storageof energy. Polysaccharides are linear as well as branched polymers. This is in contrast to structureof proteinsand nucleicacidswhich are only linear polymers. The occurrence of branchesin polysaccharidesis due to the fact that glycosidic linkagescan be formed at any one of the hydroxylBroupsof a monosaccharide. Polysaccharidesare of two types 1. Homopolysaccharideswhich on hydrolysis yield only a singletype of monosaccharide.They are named based on the nature of the monosaccharideunit. Thus,glucans arepolymers of glucose whereas fructosans are polymers of fructose. 2. Heteropofysaccharideson hydrolysisyield a mixture of a few monosaccharidesor their derivatives. $tarch Starch is the carbohydrate reserveof plants which is the most importantdietary sourcefor higheranimals,includingman. High contentof starchis found in cereals,roots,tubers,vegetables etc. Starch is a homopolymer composed of D-glucoseunits held by a-glycosidicbonds. lt is known as glucosan or glucan. Starch consists of two polysaccharide components-water soluble amylose (15-20o/ol and a water insoluble amylopectin (80-85%). Chemically, amylose is a long unbranched chain with 200-1,00OD-glucoseunitsheld by c (1 + 4) glycosidiclinkages.Amylopectin,on the other hand, is a branchedchain with a (1 --r 6t glycosidicbondsat the branchingpointsand c (1 -; 4) linkages everywhere else (Fig.2.13). Amylopectin molecule containing a few
  • 28. ChapteF 2 : CARBOHYDFATES 21 D-Glucose D-Glucose Amylopectin o-Amylose +- (1-* 6) Branch MainchainLg 6nu vt t2 thousandglucoseunits looks like a branched tree (20-30 glucoseunits per branch). Starches are hydrolysed by amylase (pancreaticor salivary)to liberatedextrins,and finally maltoseand glucoseunits.Amylaseacts specificallyon a (1 -+ 4) glycosidicbonds. Dextrins Dextrins are the breakdown products of starchby the enzyme amylaseor dilute acids. Starch is sequentially hydrolysed through different dextrins and, finally, to maltose and glucose.The variousintermediates(identifiedby iodine colouration) are soluble starch (blue), amylodextrin (violet), erythrodextrin (red) and achrodextrin (no colour). Inulin fnulin is a polymerof fructosei.e., fructosan. It occursin dahlia bulbs,garlic,onion etc. lt is a low molecularweight (around5,000) poly- saccharideeasilysoluble in water. Inulin is not utilized by the body. lt is used for assessing kidney function through measurement of glomerular filtration rate (GFR). Glycogen Clycogen is the carbohydrate reserve in animals,henceoften referredro asanimal starch. It is present in high concentration in liver, followed by muscle,brainetc.Clycogenis also found in plantsthat do not possesschlorophyll (e.9.yeast,fungi). The structureof glycogenis similarto that of amylopectin with more number of branches. Glucoseis the repeatingunit in glycogenjoined togetherby u (1 + 4) glycosidicbonds,and a (1 + 6) glycosidic bonds at branching points (Fi9.2.1Q.The molecularweight (up to 1 x 108) and the numberof glucoseunits (up to 25,000) vary in glycogendependingon the sourcefrom which glycogenis obtained.
  • 29. 22 BIOCHEMISTRY Fiq.2.14: Structureofglycogen(A)Generalstructure (B)Enlargedat a branchpoint. Cellulose Celluloseoccursexclusivelyin plantsand it is the most abundant organic substancein plant kingdom. lt is a predominantconstituentof plant cell wall. Celluloseis totally absent in animal body. Cellulose is composed of p-D-glucose units linked by 9 0 -+ 4) glycosidic bonds(Fi9.2.1fl. Cellulosecannot be digestedby mammals- includingman-due to lack of the enzymethat cleavesB-glycosidicbonds(a amylasebreakscr bondsonly). Certainruminantsand herbivorous animalscontainmicroorganismsin thegutwhich produce enzymesthat can cleave p-glycosidic bonds. Hydrolysis of cellulose yields a disaccharide cellobiose, followed by P-D- glucose. Cellulose, though not digested, has great importancein human nutrition. lt is a major constituentol fiber, the non-digestablecarbo- hydrate.The functions of dietary fiber include decreasing the absorption of glucose and cholesterolfrom the intestine,besidesincreasing the bulk of feces. (For details,Chapter 23) Ghitin Chitin is composed of N-acetyl D- glucosamineunits held togetherby F (1 -+ a) glycosidicbonds.lt isa structuralpolysaccharide found in the exoskeletonof some invertebrates e.g. insects,crustaceans. When the polysaccharidesare composedof differenttypesof sugarsor their derivatives,they are referred to as heteropolvsaccharidesor heteroglycans. MUCOPOLYSACCHARIDES Mucopolysaccharidesare heteroglycansmade up of repeatingunitsof sugarderivatives,namely amino sugarsand uronic acids.Theseare more commonly known as glycosaminoglycans (GAG).Acetylatedamino groups,besidessulfate and carboxyl groups are generally present in CAC structure.The presenceof sulfate and carboxyl groups contributesto acidity of the molecules, making them acid mucopoly,- saccharides. Someof the mucopolysaccharidesare found in combination with proteins to forrn mucoproteins or mucoids or proteoglycans (Fig.2.l6l.Mucoproteinsmay containup to 95o, carbohydrate and 5o/"protein. S-D-Glucose T N T Ot (B) 9H2OH uqt, CH2oH y'-O., , F--o. ,r4-Or - (+ i) - r+ ,L^_K. X^_-oJ, ,./'o-'- J - L-/ " --l Fig. 2.15 : Structureof cellulose(The repeat:r; -- ' may be several thousands).
  • 30. CARBOHYDRATES 23 Fig. 2.16 : Diagrammaticrepresentationof a prateoglycan complex. Mucopolysaccharidesareessentialcomponents of tissue structure.The extracellularspacesof tissue (particularlyconnective tissue-cartilage, skin, blood vessels,tendons)consistof collagen and elastinfibersembeddedin a matrixor ground substance.Thegroundsubstanceis predominantly composedof CAC. The importantmucopolysaccharidesincluoe hyaluronicacid, chondroitin4-sulfate,heparin, dermatansulfateand keratansulfate(Fig.Z.'[1. j'i' ,ir:r:, | '.i. :,{,tiiiEl'l Hyaluronicacid is an importantGAC found in the groundsubstanceof synovialfluid of joints and vitreoushumor of eyes.it is also presentas a ground substancein connectivetissues,and forms a gel aroundthe ovum. Hyaluronicacid servesas a lubricantand shock absorbantin joints. BToMEDtCAt/ CLtft|ICALCO$CEpTS Hyaluronicacid rlr Glucose is the most important energy sourceol carbohgdratesto the mammals (except ruminants).The bulk of dietary carbohydrote(starch)is dlgestedond finally obsorbedas glucose into the body. Ea Dextrose (glucosein solution in dextrorotatory form) is frequently used in medical Rq'- CF practice. Fructoseis obundantly found in the semen which is utilized by the spermsfor energy. Seueral diseoses are associated with carbohydrate.se.g., diabetes mellitus, glycogen storage diseoses,galactosemia. trs Accumulation of sorbitol and dulcitol in the fissuesmoy cause certoin pathological conditionse.g. cotaract, nephropothy. t-s' Inulin, a polymer of t'ructose,is used fo ossessrenal function by meosuringglomerular filtration rate (GFR). ue The non-digestiblecarbohydratecellulose playsa signilicant role in human nutriticsn. These include decreasing the intestinal absorption ol glucose and cholesterol, qnd increasingbulk of feces to ouoid eonstipation. rt The mucopolysaccharidehyaluronic acid seruesas a lubricant and shock absorbantin ioints. The enzgmehgaluronidaseof semendegradesthe gel (contains hyaluronic acid)around the ouum. This qllows eft'ectiuepenetration of sperm into the ouum. The mucopolysaccharideheparin is an onticoagulant(preuentsblood clotting). The suruiual of Antarctic lish below -2"C is attributed to the antit'reeze glycoproteins. streptomycin is a glycosideemployed in the treatment oJ tuberculosis. !3:. [j- IF s: -;-- s' -sS't/:- -'-
  • 31. 24 BIOCHEMISTFIY Hyaluronic acid is composed of alternate units of D-glucuronic acid and N-acetyl D-glucosamine.These two molecules form disaccharideunits held togetherby 0 (t -+ S) glycosidic bond (Fi9,2,15).Hyaluronic acid containsabout 250-25,000 disaccharideunits (heldby p 1 -+ 4 bonds)with a molecularweight uo to 4 million. Hyaluronidase is an enzyme that breaks (B1 -+ 4 linkages)hyaluronic acid and other CAC. This enzyme is present in high concentrationin testes,seminalfluid, and in certainsnakeand insectvenoms.Hyaluronidase of semen is assignedan important role in fertilization as this enzyme clears the gel (hyaluronicacid) around the ovum allowing a better penetration of sperm into the ovum. Hyaluronidaseof bacteriahelps their invasion into the animaltissues. Ghondroitin sulfates Chondroitin 4-sulfate (Greek: chondros- cartilage) is a major constituent of various mammalian tissues(bone, cartilage,tendons, heart,valves,skin,corneaetc.).Structurally,it is comparablewith hyaluronicacid. Chondroitin 4-sulfateconsistsof repeatingdisaccharideunits composedof D-glucuronicacid and N-acetyl D-galactosamine4-sulfate(Fig.2.lV. Chondroitin5-sulfateis alsopresentin many tissues.As evident from the name, the sulfate group is found on C6 insteadof Ca. Heparin Heparin is an anticoagulant(preventsblood clotting)thatoccursin blood,lung,liver,kidney, spleenetc. Heparin helps in the releaseof the enzyme lipoprotein lipase which helps in clearingthe turbidityof lipemic plasma. Heparin is composedof alternatingunits of N-sulfoD-glucosamine6-sulfateand glucuronate 2-sulfate(Fi9.2.17). Dermatan sulfate The name dermatansulfateis derived from the fact that this compoundmostlyoccursin the skin. lt is structurallyrelated to chondroitin D-Glucuronicacid N-Acetylglucosamine Hyaluronic acid H NH-CO-CH3 N-Acetylgalactosamine 4-sulfate Chondroitin 4-sulfate o- D-Glucuronate-2-sulfateN-Sulfoglucosamine 6-sulfate Heparin t -o'r H NH_CO_CH. N-Acetylgalactosamine 4-sulfate Dermatansulfate H NH_CO :- N-Acetylglucosamine 6-sulfate Keratansulfate Fiq.2.17 : Structuresof commonglycosaminogi',-;-: - D-Glucuronicacid H O-SO; -o-so3 H NH-SOa qH2oH o the disaccharidesas repeatingunits.
  • 32. Ghapter 2 : CAFIBOHYDHATES 25 Glycosaminoglycan Composition Tissuedistribution Function(s) Hyaluronicacid D-Glucuronicacid, N-acetylglucosamine Connectivetissue,synovialfluid, vitroushumor Servesasalubricant.and shockabsorber.Promotes woundhealing Chondroitinsulfate D-Glucuronicacid, N-acetylgalactosamine 4-sulfate Cartilage,bone,skin,bloodvessel walls Helpstomaintainthestructure andshapesoftissues Heparin D-Glucuronate2-sulfate,Blood,lung,liver,kidney,spleen N-sulfoglucosamine 6-sulfate Actsasananticoagulant Dermatansulfate L-lduronicacid,N-acetyl- galactosamine4-sulfate Bloodvesselvalves,heartvalves, Maintainstheshapesoftissues skin Keratansulfate D-Galactose,N-acetyl- glucosamine6-sulfate Cartilage,cornea,connective tissues Keepscorneatransparent 4-sulfate.The only differenceis that there is an inversion in the configuration around C5 of D-glucuronic acid to form L-iduronic acid (Fi9.2.1V. Keratan sulfate It is a heterogeneousCAG with a variable sulfate content, besides small amounts of mannose, fructose, sialic acid etc. Keratan sulfateessentiallyconsistsof alternatingunitsof D-galactosamine and N-acetylglucosamine 6-sulfate. A summaryof the glycosaminoglycanswith regardto composition,distributionand functions is given in Table 2.3. Several proteins are covalently bound to carbohydrateswhich are referredto as glyco- proteins. The carbohydrate content of glycoproteinvariesfrom 1o/oto 90o/oby weight, Sometimes the term mucoprotein is used for glycoprotein with carbohydrateconcentration more than 4"/o. Clycoproteins are very widely distributedin the cells and perform variety of functions.Theseincludetheir role as enzymes, hormones,transportproteins,structuralproteins and receptors.A selectedlist of glycoproteins and their major functionsis given in Table2.4. The carbohydratesfound in glycoproteins include mannose, galactose, N-acetyl- glucosamine, N-acetylgalactosamine,xylose, L-fucoseand N-acetylneuraminicacid (NANA). NANA is an importantsialicacid (SeeFig.2,l1). Antifreeze glycoproteins : The Antarctic fish live below -2oC, a temperatureat which the Glycoprotein(s) Major function(s) Collagen Hydrolases,proteases, glycosidases Ceruloplasmin lmmunoglobulins Synovialglycoproteins Thyrotropin,erylhropoietin Bloodgroupsubstances Fibronectin,laminin Intrinsicfactor Fibrinogen Structure Enzymes Transport Defenseagainstinfection Lubrication Hormones Antigens Cell-cellrecognitionand adhesion Absorptionofvitamin8,, Bloodclotting
  • 33. 26 ElIOCHEMISTF|Y blood would {reeze.lt is now known that ihese fish contain antifreezeglycogtrateinwhich lower the freezingpoint of waterand interferewith tne crystalformationof ice. Antifreezegiycoproteins consistof 50 repeatingunits of the tripeptide, alanine-alawine-threonine. Each threonine residue is bound to B-galactosyl(1 + 3) o( N-acetylgalactosamine. ri#i .f*iCA# '? r,.4F.!"r.Ii $:F"r1.*fi { "'.3 i4 t: * :il The blood group antigens (of erythrocyte membrane) contain carbohydratesas glyco- proteinsor glycolipids.N-,A.cetylgaiactosamine, galactose,fucose,sialic acid etc. are found in the blood group substances.The carbohydrate contentalso playsa determinantrole in blood Eroup!n8. X. Carbohydrs,tesare the polyhydroxyaldehydesor ketones,or campounds whichproduce them on hydrolysis.The term sugor is applied to carbohydratessoluble in water and stDeetto taste. Carbahgdratesqre the major dietary energy sources,besidestheir inualuementin cell structure and uariousother t'unctions. 2. Carbohydrqtesare broadly c/ossiJiedinta 3 groups-ffionasqccharides,oligosoccharides and ytoiysaccharides.The monosacchsridesare further diuided into dit't'erentcategories bqsedan the presenceaf t'wnctionalgroups {oldosesar ketoses)and the number of carbon atoms (trioses,tetroses,pentases,hexosesand heptcses). 3. Glyceraldehyde{triose) is the simplestcarbohydrateand is chosen as a reJerenceto write the cont'iguratian of all other rnonasaccharides(D- anc L- forms). It' two rnonosaccharidesdiffer in their structurearound o singlecarbonatom, they ore known as eplmers.Glucoseand galactoseare C4-epimers. 4. D'Glucose is the most predominant naturally occurring aldosdmonosaccharide. Giucoseexisfscs a and p anemerswith dit'Jerentopticalrotations. The interconuersion of a and B anomericforms with changein theopticalrotatianis knoun asmutsratation. 5. Manosaccharidespariicipate in seuercl recctions"Theseinclude oxidation, reduction. dehydration, asazone formetion etc. Formatian ol esters and glycosides by manosacchqridesis af specialsignificanceln biochemical reactions. 6. Among the oligosacchqrides,disoccharidesare the most common. Theseinclude the reducing disaccharidesnamely lactose(rnilk sugar)and maltase(malt sugar)and the non-reducingsucrose(canesugar). 7. Palysacclwridesare the poiymersot' monosaccharidesor their deriuatiues,held together by glycosidic bonds.Homopalysaccharidessre compasedot' a single manosaccharicle (e.g., starch,glycogen,cellulose, inulin). Heteropolysaccharidescontain a mixture af Jew monasaceharidesor thetr derluatiues(e.g., rnucapolysacaharides). 8. Slorch and glgcogensre the carbohydratereseruesot' plants and animalsrespectiuelg. Cellulose,exclusiuelyt'ound in plants, is the structural constituent.Inulin is utilized to ossesskidney tunction bg measuringglomerular t'iltration rate (GFR). 9. Mucopoiysaccharides(glycosominoglycans)are the essential companents o/ tlssue structure. Theyprouide the mstrix or grownd substanceof extracellular tissuespacesin whtchcollagenand elastinfibers are embedded.Hyaluranic ocid,chondroitin 4'sult'ote, heporin, are amang the important glycosaminaglgcdns. 70. Glycoproteins are a group of biochernically important compaunds with a uariable composition of carbohyd.rate(7-900/o),caualently bound to protein. Seueralenzyrnes, hormanes,structura! proteinsand cellular receptorsare in fact glycoproteins.
  • 34. Ghapter 2 : CAFIBOHYDHATES I. Essayquestions 1. Define and classifycarbohydrateswith suitableexamples.Add a note on the functionsof carbohydrates. 2. Describethe structureand functionsof mucopolysaccharides. 3. Cive an accountof the structuralconfigurationof monosaccharides,with specialreferenceto glucose. 4. Discussthe structureand functionsof 3 biochemicallyimportantdisaccharides. 5. Definepolysaccharidesand describethe structureof 3 homopolysaccharides. Short notes (a)Epimers,(b)Mutarotation,(c)Osazoneformation,(d)Clycosidicbond,(e)Sugarderivatives,(fl Anomers,(g)Enediol,(h)Amino su8ars,(i) Inversionof sucrose,(j) Deoxysugars. Fill in the blanks 1. Namea non-reducingdisaccharide 2. The carbohydratethat is taken as a referencefor writing the configurationof others 3. lf two monosaccharidesdifferin configurationarounda singlecarbonatom,they are known as 27 II. III. 4. 5. 6. 7. B. 9. 10. The s and B cyclicformsof D-glucoseare referredto as The non-carbohydratemoietyfound in glycosidesis known as Cive an exampleof a glycosideantibiotic Theglycosidicbondsat the branchingpointsin the structureof starchare The polysaccharideemployedfor the assessmentof kidneyfunction The glycosaminoglycanthat servesas a lubricantand shockabsorbantof joints Namethe sialicacid,mostlyfound in the structureof glycoproteinsand glycolipids IV. Multiple choice questions 11. Riboseand deoxyribosedifferin structurearounda singlecarbon,namely (a)Cr (b)Cz (c)C: (d)Cq. 12. One of the followingis not an aldose (a)Clucose(b)Calactose(c) Mannose(d) Fructose. 13. The glycosaminoglycanthat servesas an anticoagulant (a) Heparin(b) Hyaluronicacid (c)Chondroitinsulfate(d) Dermatansulfate. 14. The followingpolysaccharideis composedof B-glycosidicbonds (a)Starch(b)Clycogen(c) Dextrin(d)Cellulose. 15. The carbonatomsinvolvedin the osazoneformation (a)'l and 2 (b) 2 and 3 (c) 3 and 4 (d) 5 and 6.
  • 35. Lirpirdls fl ?"'-o- i R--c-o1H frCH2-H R3 The Jat speaks : "ffith uater, I say, 'Touch menot': T'otlte tongue,I am tasteful; IY'ithin limits, I am datiful; fn excess,I am dangerous!" I ipids (Creek: lipos-fat) are of Breat L importance to the body as the chief concentratedstorageform of energy, besides their role in cellularstructureand variousother biochemicalfunctions.As such. lioids are a heterogeneous group of compounds ano, therefore,it is rather difficult to define them preciselv. Lipidsmay be regarded as organic substances relatively insoluble in water, soluble in organic solvents (alcohol, ether etc.), actually or potentially related to fatty acidsand utilized by the living cells. Unlike the polysaccharides,proteins and nucleic acids,lipids are not polymers.Further, lipidsare mostlysmall molecules. Lipids are broadlyclassified(modifiedfrom Bloor) into simple, complex, derived and miscellaneouslipids,whicharefurthersubdivided into differentgroups 1. Simple lipids: Estersof fatty acids with alcohols.Theseare mainly of two types (a) Fatsand oils (triacylglycerols): Theseare estersof fatty acids with glycerol. The difference between fat and oil is only physical.Thus,oil is a liquid while fat is a solid at room temperature. (b) Waxes: Estersof fattyacids(usuallylong chain)with alcoholsotherthan glycerol. These alcohols may be aliphatic or alicyclic.Cetylalcoholis mostcommonly found in waxes. 2. Complex(or compound)lipids: Theseare estersof fatty acids with alcohols containing additional groups such as phosphate, nitrogenousbase, carbohydrate,protein etc They are furtherdividedas follows (a) Phospholipids:They containphosphor,c acid and frequentlya nitrogenousbase This is in addition to alcohol and fai:. acids. 28
  • 36. Chapter 3 : LIPIDS 29 (i) Glycerophospholipids: Thesephospho- lipids containglycerolas the alcohol e.9.,lecithin,cephalin. (ii) Sphingophospholipids: Sphingosineis the alcohol in this group of phospho- lipidse.g.,sphingomyelin. (b) Glycolipids: Theselipids contain a fatty acid, carbohydrateand nitrogenousbase. The alcohol is sphingosine,hence they are also called as glycosphingolipids. Clycerol and phosphateare absente.g., cerebrosides,gangliosides. (c) Lipoproteins: Macromolecularcomplexes of lipids with proteins. (d) Other complexlipids: Sulfolipids,amino- lipidsand lipopolysaccharidesareamong the othercomplex lipids. 3. Derived lipids: Theseare the derivatives obtainedon the hydrolysisof group 1 and group 2lipids which possessthe characteristicsof lipids.Theseincludeglycerolandotheralcohols, fatty acids,mono- and diacylglycerols,lipid (fat) soluble vitamins, steroid hormones, hydro- carbonsand ketonebodies. 4. Miscellaneouslipids: These include a large number of compounds possessingthe characteristics of lipids €.g., carotenoids, squalene,hydrocarbonssuch as pentacosane(in bees wax), terpenesetc. NEUTRAT LIPIDS: The lipids which are unchargedare referredto asneutrallipids.These are mono-, di-, and triacylglycerols,cholesterol and cholesterylesters. Functions of lipids Lipids performseveralimportantfunctions 1. They are the concentratedfuel reserveof the body (triacylglycerols). 2. Lipids are the constituentsof membrane structure and regulate the membrane permeability(phospholipidsand cholesterol). 3. They serve as a source of fat soluble vitamins(4, D, E and K). 4. Lipidsare importantas cellularmetabolic regulators(steroidhormonesand prostaglandins). 5. Lipidsprotectthe internalorgans,serveas insulatingmaterialsand give shapeand smooth appearanceto the body. Fatty acids are carboxylic acids with hydrocarbonside chain. They are the simplest form of lipids. Occurrence Fattyacidsmainly occur in the esterifiedform as major constituentsof variouslipids.They are also present as free (unesterified)fatty acids. Fattyacidsof animalorgin are much simplerin structure in contrast to those of plant origin which oftencontaingroupssuch asepoxy,keto, hydroxy and cyclopentanerings. Even and odd carbon fatty acids Most of the fatty acids that occur in natural lipids are of even carbons(usually 14C-2OC). This is due to the fact that biosynthesisof fatty acidsmainly occurswith the sequentialaddition of 2 carbon units. Palmitic acid (l6C) and stearicacid (l$C) are the most common. Among the odd chain fatty acids, propionic acid (3C) and valericacid (5C)are well known. Saturated and unsaturated fatty acids Saturatedfatty acids do not contain double bonds,while unsaturatedfattyacidscontainone or more double bonds. Both saturated and unsaturatedfatty acids almost equally occur in the natural lipids. Fatty acids with one double bond are monounsaturated,and thosewith 2 or more double bonds are collectivelv known as polyunsaturated fafty acids (PIJFA). Nomenclature of fatty acids The namingof a fatty acid (systematicname) is basedon the hydrocarbonfrom which it is derived. The saturatedfatty acids end with a suffix -anoic (e.g., octanoic acid) while the unsaturatedfatty acids end with a suffix -enoic
  • 37. 30 BIOCHEMISTF|Y (e.9., octadecanoic acid). In addition to systematicnames/ fatty acids have common nameswhich are more widely used (Iable J. l). Numbering of carbon atoms : lt startsfrom the carboxylcarbonwhich is takenas number1. The carbonsadjacentto this (carboxylC) are2, 3, 4 and so on or alternatelya, F, T and so on. The terminalcarbon containingmethyl group is known omega (or) carbon. Starting from the methylend, the carbonatomsin a fattyacid are numberedas omega 1, 2, 3 etc. The numbering of carbon atoms in two different ways is given below 7654321 cH3 - cH2 - cH2- cH2-cH2 - cH2 - COOH 01 a2 o)3 ()4 ol5 (t)6 Length of hydrocarbon cha:n of fatty acids Dependingon the length of carbon chains, fatty acids are categorizedinto 3 groups-short chain with less than 6 carbons; medium chain with 8 to 14 carbons and long cfiain with 16 to 24 carbons. Shorthand representation of latty aclds lnstead of writing the full structures, biochemists employ shorthand notations (by numbers)to representfatty acids. The general rule is that the total numberof carbonatomsare written first,followed by the nunrberof double bonds and finally the (firstcarbon) position of Common Name Systematicname Abbreviationx Structure l.Saturatedfattyaclds Aceticacid Propionicacid Butyricacid Valericacid Caproicacid Caprylicacid Capricacid Lauricacid Myristicacid Palmiticacid Stearicacid Arachidicacid Behenicacid Lignocericacid Ethanoicacid n-Propanoicacid n-Butanoicacid n-Pentanoicacid n-Hexanoicacid n-Octanoicacid n-Decanoicacid n-Dodecanoicacid n-Tetradecanoicacid n-Hexadecanoicacid n-Octadecanoicacid n-Eicosanoicacid n-Docosanoicacid n-Tetracosanoicacid CHsCO0H CHgCHzCOOH CHs(CHz)z0O0H CHo(CHz)gCOOH CHs(CHe)+COOH CHe(CHz)oCOOH CHs(CHz)eC0OH CHs(CHz)roCOOH CHs(CHzhzCOOH CHg(CHz)t+CO0H CHs(CHz)roC0OH CHg(CHz)reCOOH CHs(CHz)zo00OH CH3(CHz)zzCOOH 2:0 3:0 4:0 F.n 6:0 8:0 10:0 12:0 14:0 16:0 18:0 20:0 22:0 24:0 ll. Unsaturatedfattyacids Palmitoleicacid Oleicacid Linoleicacid** Linolenicacid*x Arachidonicacid cr1s9-Hexadecenoicacid cls-9-Octadecenoicacid cls,cls-9,12-Octadeca- dienoicacid Allce9,12,15-0cta- decatrienoicacid Allcls-5,8,11,14- 16:1;9 18:1;9 18:2;9,12 18:3;9,12,'15 20:4;5,8,11,14 CHg(CHz)sCH=CH(CHz)zCOOH CHs(CHz)zCH=CH(CHz)zCOOH CHg(CHz)+CH=CHCHzCH=CH(CHz)zCOOH CHoCHzCH=CHCHzCH=CHCHzCH =CH(CHz)zCO0H CHg(CHz)+CH=CHCHzCH=CHCHzCH Elc0:a!tr3e!o!1ci1___ __=9H9'tcl=_cl9F!)49oli * Totalnunberofcarbonatons,followedbythenumberotdoublebondsandthefirctcarbonposrtionotthedoublebond(s). ** Essentialfawacids.
  • 38. Ghapten 3 : LIPIDS 31 double bonds, startingfrom the carboxyl end. Thus,saturatedfattyacid, palmiticacid iswritten as.l 6:0, oleic acid as 18:1;9, arachidonic acid as 20 : 4; 5, 8, 11, 14. There are other conventionsof representing the double bonds.Ae indicatesthat the double bond is between9 and 10 of the fatty acid. o 9 representsthe double bond position(9 and 10) from the <oend. Naturallyoccurringunsaturated fatty acids belongto ro 9, ol 6 and o 3 series. a 3 series Linolenicacid(18 : 3;9, 12, 15) a 6 series Linoleicacid ('l8 : 2; 9, 12) and arachidonic acid (20 : 4; 5, 8, 11, 14) ro9 series Oleicacid(18 : 1; 9) The biochemically important saturatedand unsaturated fatty acids are given in the Table 3.1. The fatty acidsthat cannotbe synthesizedby the body and, therefore, should be supplied in the diet are known asessentialfattyacids(EFA). Chemically, they are polyunsaturated fatty acids, namely linoleic acid (18 : 2; 9, 12) and Iinolenic acid (18 : 3; 9, 12, 15). Arachidonic acid (20 :4;5,8, 11,14) becomesessential,if its precursorlinoleic acid is not providedin the diet in sufficientamounts.The structuresof EFA are given in the Table3.1. Biochemical basis for essentiality: Linoleic acid and linolenic acid are essentialsince humans lack the enzymesthat can introduce double bonds beyond carbons9 to 10. Functionsof EFA: Essentialfatty acids are required for the membrane structure and function, transportof cholesterol,formation of lipoproteins,preventionof fatty liver etc. They are also needed for the synthesisof another important group of compounds, namely eicosanoids(Chapter 32. Deficiency of EFA: The deficiency of EFA results in phrynoderma or toad skin, characterizedby the presenceof hornyeruptions H..ar(CHz)zCOOH H'c'1cHr;rcu, Oleic acid (clsform) Fig. 3.1 : Cis-trans isomerism in unsaturated fattv acids. on the posteriorand lateralpartsof limbs,on the back and buttocks,lossof hair and poor wound healing. lsomerism in unsaturated fatiy aeids Unsaturated fatty acids exhibit geometric isomerismdependingon the orientationof the groupsaround the double bond axis. lf the atomsor acyl groupsare presenton the same side of the double bond, it is a cis configuration. On the other hand, if the groups occur on the opposite side, it is a trans configuration. Thus oleic acid is a cis isomer while elaidic acid is a transisomer,as depicted in Fig.3.1. Cis isomersare lessstablethan frans isomers. Most of the naturally occurring unsaturatedfatty acids exist as crs isomers. In the cis isomericform, there is a molecular binding at the double bond. Thus, oleic acid exists in an L-shapewhile elaidic acid is a straightchain.Increasein the numberof double bonds will cause more bends (kinks) and arachidonicacid with 4 doublebondswill have a U-shape.lt is believed that cis isomersof fatty acids with their characteristic bonds will compactlypack the membranestructure. Hydroxy fatty acids: Someof the fatty acids are hydroxylated.p-Hydroxybutyricacid, one of the ketonebodiesproducedin metabolism,is a simple example of hydroxy fatty acids. Cerebronic acid and recinoleic acid are long chain hydroxy fatty acids. Cyclic fatty acids: Fatty acids with cyclic structuresare ratherraree.g./ chaulmoogric acid found in chaulmoogra oil (used in leprosy treatment)containscyclopentenylring. Elaldicacid (fransform)
  • 39. 32 BIOCHEMISTFIY U A CH2-O-C Fl, ltl R2-C-O-CH O ttl cH2-o-c-R3 Triacylglycerol o cH2-o-c -B t- HO_CH I cH20H 1-Monoacylglycerol o o Rz-C cH2-o-c-R, -o-cH I cH2oH 1,2-Diacylglycerol O CH,_OH ill R-C-O-CH I cH2oH 2-Monoacylglycerol Fig. 3.2 : General structures of acylglycerols (For palmitoyl R = CtsHati for stearoyl R = C.rzHssiFor linoleoyl R = qtHsi Eicosanoids:Thesecompoundsare relatedro eicosapolyenoicfatty acids and include prosta- glandins,prostacyclins,leukotrienesand throm- boxanes.Theyarediscussedtogether(Chapter32). Triacylglycerols (formerly triglycerides) are the estersof glycerol with fatty acids. The fats and oils thatarewidely distributedin both plants and animals are chemically triacylglycerols. They are insolublein water and non-polarin characterand commonly known as neutralfats. Fatsas stored fuel : Triacylglycerolsare the most abundantgroup of lipids that primarily function as fuel reservesof animals. The fat reserveof normal humans (men 2Oo/o,women 25% by weigh$ is sufficientto meet the body's caloric requirementsfor 2-3 months. Fats primarily occur in adipose tissue: Adipocytes of adipose tissue-predominantly found in the subcutaneouslayer and in the abdominalcavity-are specializedfor storageof triacylglycerols.The fat is storedin the form of globulesdispersedin the entirecytoplasm.And surprisingly,triacylglycerolsarenot the structural componentsof biological membranes. Structures of acylglycerols: Monoacyl- glycerols, diacylglycerolsand triacylglycerols, respectivelyconsistingof one, two and three moleculesof fatty acidsesterifiedto a molecule of glycerol,are known (Fi5.3.2).Among these, triacylglycerols are the most important biochemically. Simpletriacylglycerolscontainthe sametype of fattyacid residueat all the threecarbonse.g., tristearoylglycerolor tristearin. Mixed triacylglycerols are more common. They contain2 or 3 different typesof fattyacid residues.In general,fatty acid attachedto C1 is saturated,that attached to C2 is unsaturated while that on C3 can be either.Triacylglycerols are named according to placement of acyl radicalon glycerole.9.,'l ,3-palmitoyl2-linoleoyl glycerol. Triacylglycerols of plants, in general, have higher content of unsaturated fatty acids compared to that of animals. $tereospecific numbering of glycerol The structureof glycerolgivesan impression thatcarbons1 and 3 are identical.Thisis not true in a 3-dimensionalstructure.In orderto represent the carbonatomsof glycerolin an unambiguous manner, biochemists adopt a stereospecific numbering(sn)and prefixglycerolwith sn. 6n,on no-C'.-H 6tr,ot sn-GfcJrol
  • 40. C*rapter'3: LIPIDS 33 It should be noted that C1 and C3 are different. Cells possess enzymes that can distinguish these two carbons. Thus glycerokinasephosphorylatessn-3(andnot sn-l) glycerolto give sn-glycerol3-phosphate. PROPERTIESOF TRIACYLGTYCEROLS A few importantpropertiesof triacylglycerols, which have biochemical relevance, are discussedbelow 1. Hydrolysis: Triacylglycerols undergo stepwiseenzymatichydrolysisto finally liberate free fatty acids and glycerol. The processof hydrolysis,catalysedby lipasesis importantfor digestionof fat in the gastrointestinaltract and fat mobilizationfrom the adiposetissues. 2. Saponification: The hydrolysisof triacyl- glycerolsby alkalito produceglyceroland soaps is known as saoonification. Triacylglycerol+ 3 NaOH ---------+ Clycerol+ 3 R-COONa(soaps) 3. Rancidity: Rancidityis the term used to represent the deterioration of fats and oils resultingin an unpleasanttaste.Fatscontaining unsaturatedfatty acids are more susceptibleto ranciditv. Rancidity occurs when fats and oils are exposed to air, moisture, light, bacteria etc. Hydrolytic rancidity occurs due to partial hydrolysis of triacylglycerols by bacterial enzymes.Oxidativerancidityis due to oxidation of unsaturatedfatty acids. This results in the formation of unpleasant products such as dicarboxylic acids, aldehydes, ketones etc. Rancid fats and oils are unsuitablefor human consumotion. Antioxidants : The substanceswhich can preventthe occurrenceof oxidativerancidityare known as antioxidants. Trace amounts of antioxidantssuch as tocopherols(vitamin E), hydroquinone,gallic acid and c,-naphtholare addedto the commercialpreparationsof fatsand oilsto preventrancidity.Propylgallate,butylated hydroxyanisole(BHA) and butylated hydroxy- toluene(BHT)are the antioxidantsused in food preservation. a. tipid peroxidation in vivo: In the living cells, lipids undergo oxidation to produce peroxidesand free radicalswhich can damage the tissue.Thefreeradicalsarebelievedto cause inflammatory diseases, ageing, cancer/ atherosclerosisetc. lt is fortunatethat the cells possessantioxidantssuchasvitamin E,urateand superoxidedismutaseto prevent in vivo lipid peroxidation (Chapter 34). Tests to check purity of fats and oils Adulterationof fatsand oils is increasingday by day. Several tests are employed in the laboratoryto check the purity of fats and oils. Some of them are discussedhereunder lodine number: lt is defined as the grams (number) of iodine absorbedby 100 g of fat or oil. lodine number is usefulto know the relative unsaturationof fats,and is directly proportional to the content of unsaturatedfatty acids. Thus lower is the iodine number,lessis the degreeof unsaturation.The iodine numbersof common oils/fatsare given below. FaUoil lodine number Coconutoil Butter Palmoil Oliveoil Groundnutoil Cottonseedoil Sunfloweroil Linseedoil 7- 10 25- 28 4C- 55 80- 85 85- 100 100- 110 125- 135 175-200 Determinationof iodinenumberwill help to know the degreeof adulterationof a given oil. Saponificationnumber: lt is defined as the mg (number) of KOH required to hydrolyse (saponify)one gram of fat or oiL Saponification number is a measureof the averagemolecular sizeof the fattyacidspresent.Thevalueis higher for fats containing short chain fatty acids. The saponificationnumbersof a few fatsand oils are given below Humanfat : 195-200 Butter :230-240 Coconutoil : 250-260
  • 41. 34 ElIOCHEMISTRY Reichert-Meissl(RM) number: lt is definedas the number of ml 0.1 N KOH required to completelyneutralizethe soluble volatile fatty acidsdistilledfrom 5 g fat. RM number is useful in testingthe purity of buttersince it containsa goodconcentrationof volatilefattyacids(butyric acid, caproicacid and caprylicacid).This is in contrastto other fats and oils which have a negligibleamount of volatile fatty acids. Butter hasa RM numberin the range25-30,while it is lessthan I for mostotheredibleoils. Thusany adulteration of hutter can be easily tested by this sensitiveRM number. Acid number : lt is definedas the numberof mg of KOH requiredto completely neutralize freefatty acidspresentin one gramfat or oil. In normalcircumstances,refinedoils shouldbe free from any free fatty acids. Oils, on decomoosition-due to chemical or bacterial contamination-yield freefatty acids.Therefore, oils with increasedacid number are unsafefor humanconsumption. These are complex or compound lipids containingphosphoricacid,in additionto fatty acids,nitrogenousbaseand alcohol(Fig.3.3). There are two classesof phospholipids 1. Clycerophospholipids(or phosphoglyce- rides)that contain glycerolas the alcohol. 2. Sphingophospholipids(or sphingomyelins) that containsphingosineas the alcohol. 1.i t ".t .;:i r,. : . ,,,.i., i-l, Clycerophospholipidsare the major lipids thatoccur in biologicalmembranes.Theyconsist of glycerol 3-phosphateesterifiedat its C1 and C2 with fatty acids. Usually, C1 contains a saturated fatty acid while C2 contains an unsaturatedfatty acid. 1. Phosphatidicacid : This is the simplest phospholipid. lt does not occur in good concentration in the tissues. Basically, phosphatidicacid is an intermediatein the synthesisof triacylglycerolsand phospholipids. The other glycerophospholipidscontaining differentnitrogenousbasesor other groupsmay be regardedas the derivativesof phosphatidic acid. 2. Lecithins (phosphatidylcholine)zTheseare the mostabundantgroupof phospholipidsin the cell membranes.Chemically,lecithin (Creek : lecithos-egg yolk) is a phosphatidicacid with choline as the base. Phosphatidylcholines represent the storage form of hody's choline. * BtoMEDtCAL/ CLtNtCAt CONCEpTS os Lipids are important to the body as constituentsof membranes,sourceol fat soluble (A, D, E and K) uitaminsqnd metabolic regulators(steroid hormonesand prostaglandlns), e Triacylglycerols (fots) primarily stored in the adipose tissue ore concentrated t'uel reseruesof the body. Fatst'ound in the subcutoneoustissueand around certaln orgons serueos thermal insulators, se The unsaturatedfatty acids-linoleicand linolenic acid-<re essentiolto humans, the deficiencyof which cousesphrynodermo or toad skin. s The cyclicfatty acid, namelychoulmoogricocid,isemployedin the treatmentof leprosy. og Fqts and oils on exposureto ah; moisture, bacteriaetc. undergo rancidity (deterioration). Thts can be preuented by the addition ol certain antioxidants (uitamin E, hgdroquinone, gallic acid). w In food preseruation,antioxidants-namely propyl gallote, butylated hydroxyanisole and butylated hydroxytoluene--arecommonly used.
  • 42. Chapter 3 : LIPIDS 35 oll g cH2-o-c-R1 ill RI-C-O-CH .:1 -l CH2-i-'-r'- i't (1)Phosphatldicacid ,11 ill i tz)Leclthln(phosphatidylcholine) ,E otl I CH2-O-C-R1 ill R2-C-O-qH rf CH2-C- --l-CH2-CH2-NH2 C- Ethanolamine (3)Cephalln(phosphatidylethanolamine) o tl ? cH2-o-c-Rl R2-c-o-?H {l CH2-r-:- = C-CHz-CH-COO- o .),f,l(5)Phosphatldylserlne myalnositol (4)Phosphatidyllnosltol A QH2-O-CF{=CH-Rlltl R2-C-O-CH .:1 CH2-t', -i' i----CHz-CH2-NH2 ,t__ C- Ethanolamine (6)Plasmalogen(phosphatidalelhanolamine) r, n-cH2 ? tr. ? Hc-o-c-R3 R4-C-O-CH2 (7)Cardlollpin(diphosphatidylglycerol) ? cH2-o-c-R1cH2-, R2-C-O-CH I H?-OH ^ CH2-.i ,: r-.'-CHe + l- ehospnatioytgty."ro,I lCeramid" _ (/t'soninoosrne$)> CH3-(CH2)12-CH:CH-CH-?H-NH-C-R ' , *.CHg r_-CHz-CHz-Nf9,Tt Choline 'n3 (8)Sphlngomyelln Fig. 3.3 : Sttucturesof phospholipids.
  • 43. 36 BIOCHEMISTF|Y (a) Dipalmitoyl lecithin is an important phosphatidylcholinefoundin lungs,lt isa surface active agent and prevents the adherence of inner surface of the lungsdue to surfacetension.Respiratory distresssyndromein infantsis a disorder characterizedby the absenceof dipalmitoyl lecithin. (b) Lysolecithinis formed by removalof the fatty acid either at C, or C, of lecithin. 3. Cephafins (phosphatidylethanolamine): Ethanolamineis the nitrogenousbasepresentin cephalins,Thus,lecithinandcephalindifferwith regardto the base. 4. Phosphatidylinositol: The steroisomer myo-inositolis attachedto phosphatidicacid to givephosphatidylinositol(Pl).Thisisan important comDonentof cell membranes.The action of certain hormones(e.9.oxytocin, vasopressin)is mediatedthroughPl. 5. Phosphatidylserine:The amino acid serineis presentin this group of glycerophos- pholipids.Phosphatidylthreonineis alsofound in certaintissues. 6. Plasmalogens: When a fatty acid is attachedby an etherlinkageat C1 of glycerolin the glycerophospholipids, the resultant compound is plasmalogen. Phosphatidal- ethanolamineis the most imoortantwhich is similarin structureto phosphatidylethanolamine but for the ether linkage(in place of ester).An unsaturatedfatty acid occurs at C1. Choline, inositoland serinemay substituteethanolamine to give other plasmalogens. Z. Cardiolipin: lt is so named as it was first isolated from heart muscle. Structurally, a cardiolipin consists of two molecules of phosphatidicacid held by an additionalglycerol through phosphategroups. lt is an important componentof inner mitochondrialmembrane. Cardiolipin is the only phosphoglyceridethat possessesantigenic properties. Sphingomyelins Sphingosineis an amino alcohol presentin sphingomyelins(sphingophospholipids).They do notcontainglycerolat all. Sphingosineisattached by an amide linkageto a fatty acid to produce ceramide.The alcohol group of sphingosineis bound to phosphorylcholinein sphingomyelin structure(Fig.3.3).Sphingomyelinsare important constituentsof myelin and are found in good quantityin brain and nervoustissues. Action of phospholipases Phospholipasesare a group of enzymesthat hydrolysephospholipids.Thereare four distinct phospholipases(Ar, 42, C and D), eachone of them specificallyactson a particularbond. For details,refer lipid metabolism(Chapter l4). Functions of phospholipids Phospholipidsconstitutean importantgroup of compound lipids that performa wide variety of functions 1. In associationwith proteins,phospholipids form the structural components of membranes and regulatemembranepermeability. 2. Phospholipids (lecithin, cephalin and cardiolipin)in the mitochondriaare responsible for maintaining the conformation of electron transportchain components,and thus cellular respiration. 3. Phospholipidsparticipatein the absorption of fat from the intestine. 4. Phospholipids are essential for the synthesisof different lipoproteins,and thus participate in the transport of lipids. 5. Accumulationof fat in liver(fattyliver)can be preventedby phospholipids,hence they are regarded as lipotropic factors. 6. Arachidonicacid,an unsaturatedfattyacid liberated from phospholipids, serves as a precursorfor the synthesisof eicosanoids(prosta- glandins,prostacyclins,thromboxanesetc.). 7. Phospholipidsparticipatein the reverse cholesteroltransport and thus help in the removalof cholesterolfrom the body. 8. Phospholipidsact as surfactants(agenL. lowering surface tension). For instance dipalmitoylphosphatidylcholineis an importar: fung surfactant. Respiratory distresssyndrome ^ infantsis associatedwith insufficientproductio^ of this surfactant.