Chair/Moderator: Pei-Yun Sabrina HSUEH, PhD (IBM T.J. Watson Research Center)
Panelists: XinXin ZHU, Bian YANG, Ying-Kuen CHEUNG , Thomas WETTER, and Sanjoy DEY
a IBM T.J. Watson Research Center, USA
b Norwegian University of Science and Technology, Norway
c Mailman School of Public health, Columbia University, USA
d, Department of Biomedical Informatics, University of Washington, USA
e Department of Medical Informatics, University of Heidelberg, Germany
The rise of consumer health awareness and the recent advent of personal health management tools (including mobile and health wearable devices) have contributed to another shift transforming the healthcare landscape. Despite the rise of health consumers, the impact of user-generated health data remains to be validated. In fact, many applications are hinged on the interpretability issues of this sort of data. The aim of this panel is two-fold. First, this panel aims to review the key dimensions in the interpretability, spanning from quality and reliability to information security and trust management. Secondly, since similar issues and methodologies have been proposed in different application areas ranging from clinical decision support to behavioral interventions and clinical trials, the panelists will also discuss both the success stories and the areas that fall short. The opportunities and barriers identified can then serve as guidelines or action items individuals can bring to their organizations to further improve the interpretability of user-generated data.
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HEC 2016 Panel: Putting User-Generated Data in Action: Improving Interpretability for Consumer Informatics
1. AN INTERNATIONAL
HELLO
Brazil - Opa
Chinese – nin haoDutch – Hallo, Goededag
French – Bonjour German - Guten Tag
Hawaiian - AlohaIndonesian -Selamat
Japan –
konnichiwa
Korean – annyeonghaseyo
Norwegian - Goddag
Portugese –’Ola
Spanish - ¡Hola!
Swedish - Hej / Hallå
Thailand - sà-wàt-dee
Russian - AlloTurkey - Alo, Efendim
Italian – Ciao Israel-Shalom
Africa – Hallo
Polish – HALO/SLUCHAM
Arabic – As salam ‘alakum
2. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Pa#ent
generated
data
–
The
transi#on
from
“more”
to
“be6er”
HEC
2016
Workshop
WS
884
Pu(ng
User-‐Generated
Data
in
Ac8on:
Improving
Interpretability
for
Clinical
and
Consumer
Informa8cs
Aug
30
16:30
-‐
18:00
Panelists:
Thomas
WETTER,
Ying-‐Kuen
CHEUNG,
Sanjoy
DEY
,
XinXin
ZHU,
Bian
YANG
Moderator:
Pei-‐Yun
Sabrina
Hsueh
3. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
HEC/MIE
2016
Workshop:
PuJng
User-‐Generated
Data
in
Ac#on:
Improving
Interpretability
for
Clinical
and
Consumer
Informa#cs
Katie Zhu, PhD MD
(IBM TJ Watson Research, USA)
Sanjoy Dey, PhD
(IBM TJ Watson Research, USA)
Ken Cheung, PhD
(Columbia University, USA)
Bian Yang
(Norwegian University of Science of Technology,
Norway)
Thomas Wetter, PhD (Panel Discussant)
(University of Heidelberg, Germany
University of Washington, USA)
Pei-Yun Sabrina Hsueh, PhD (Moderator)
(IBM T.J. Watson Research, USA)
4. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Agenda
•
16:30-‐16:40
Opening
Remark
by
Dr.
Sabrina
Hsueh
• EMERGING
HEALTHCARE
LANDSCAPE
SHIFT
WITH
PATIENT-‐GENERATED
DATA
•
16:40-‐17:20
Presenta#ons
– Dr.
Xinxin
Zhu:
So
we
got
sensor
data,
now
what?
– Dr.
Sanjoy
Dey:
Enhancing
interpretability
of
computa#onal
model
– Dr.
Ken
Cheung:
SMART-‐AR
to
evaluate
health
apps
for
outcome
op#miza#on
– Dr.
Bian
Yang:
The
need
for
addressing
privacy
issues
with
be6er
interpretable
rules
•
17:20-‐18:00
Discussant
summary
presenta#on
&
Panel
discussion/audience
Q&A
– Dr.
Thomas
We6er:
Pa#ent
generated
data
–
The
transi#on
from
“more”
to
“be6er”
– Panel
discussion
(moderated
by
Dr.
Sabrina
Hsueh)
5. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Summary
on
Workshop
Theme
(1)
• (1)
Iden#fy
immediate
ac#on
items
to
start
ini#a#ng
proposal
for
enabling
evidence-‐based
conversa#on
with
pa#ents/physicians/providers
in
the
loop
6. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Summary
on
Workshop
Theme
(1)
• 2.
Implica#ons
and
lessons
learned
from
the
case
studies
-‐-‐
especially
the
gaps
you
perceived
as
barriers
of
entry
7. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Summary
on
Workshop
Theme
(2)
• 3.
Requirements
for
successful
redesign
of
healthcare
systems
to
accommodate
pa#ent-‐
generated
informa#on
(with
a
sub-‐goal
of
iden#fying
the
areas
where
such
informa#on
can
make
most
impacts).
8. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Ques#ons
• 1.
What
is
the
state-‐of-‐the-‐art?
• 2.
What
are
the
benefits
of
improving
interpretability
in
PGHD
in
ac#on?
• 3.
What
the
key
dimension
of
interpretability
of
PGHD?
What
are
the
barriers?
Technical/social?
• 4.
What
is
our
defini#on
of
interpretability?
What
are
the
likely
measures?
• 5.
What
is
the
opportunity
area
going
forward?
• 6.
What
are
the
likely
ac#on
items
to
be
suggested
to
the
community
to
further
the
discussion
about
improving
interpretability
for
PGHD?
– In
the
field
of
consumer
health
informa#cs
or
beyond?
9. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
INTRODUCTION
EMERGING
HEALTHCARE
LANDSCAPE
SHIFT
WITH
PATIENT-‐GENERATED
DATA
10. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Pei-Yun (Sabrina) Hsueh, PhD
Wellness
Analy8cs
Lead
Global
Technology
Outlook
Healthcare
Topic
co-‐Lead
Healthcare
Informa8cs
PIC
co-‐Chair
Computa8onal
Behavioral
and
Decision
Science
Group
Health
Informa8cs
Research
Dept.
IBM
T.
J.
Watson
Research
Center
•
Research
focus:
Pa8ent-‐genera8on
info
from
wearables
and
biosensor
devices/implants,
Personaliza8on
analy8cs,
Pa8ent
engagement
&
Adherence
risk
mi8ga8on,
Interpretable
machine
learning
Opening Remark
11. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Source:
Based
on
McGinnis
et
al,
The
Case
for
More
Active
Policy
Attention
to
Health
Promotion,
Health
Affairs,
2002.
Health
Determinants
Mismatches
Today’s
Spending
“We
need
to
invest
in
addressing
all
determinants
of
health…”
BIG DATA
Clinical + behavior
driven
Wellness Management
13. Solutions
Population Health
Management
Condition
Specific Care
Health
and Wellness
Social
Programs
Discovery
Solutions
Real World
Evidence
Ecosystem
Population Health
Management
Condition
Specific Care
Health
and Wellness
Social
Programs
Discovery
Solutions
Real World
Evidence
Individual
Social
Programs
Education
Governments
Home Health
Agencies
Practitioners
Hospitals
Therapists
Health
Plans
Family
Public Health
Medical Devices
and Diagnostics
Bio-Pharma
Employers
Payers
Data
Insight
To tap into the potential of DTR in open
deployment, accessing a vast amount of
untapped data could have a great impact
14. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
1
4
PGHD: Beyond Capturing Social/Behavioral
Determinants from EHR
Institute of Medicine
report (2016)
15. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
1
5
• R.W. White, R. Harpaz, N.H. Shah, W. DuMouchel, and E. Horvitz.
Toward Enhanced Pharmacovigilance using Patient-Generated Data on the Internet, Nature CPT, April 2014.
Success Story:
PGHD for Pharmacovigilance
16. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Success Story:
PGHD for Personalized Communication
Palmquist, A.E.L., Koehly, L.M., Peterson, S.K. et al. J Genet Counsel
(2010) 19: 473. doi:10.1007/s10897-010-9299-8
17. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Success Story:
PGHD for Diagnosis
Identify the onset and progression of disease states
e.g., depression, Parkinson’s, PTSD
Assist with decision
making in ER
(e.g., FITBIT CHARGE HR)
Source:
1. http://www.androidauthority.com/fibit-charge-hr-save-patient-685205/
2. M. Sung, C. Marci, and A.S. Pentland, Objective Physiological and Behavioral
Measures for Identifying and Tracking Depression State in Clinically Depressed
Patients, MIT Technical Report, 595 (2005): 1-20.
3. S. Arora, V. Venkataraman, S. Donohue, K.M. Biglan, E.R. Dorsey, M.A. Little,
High accuracy discrimination of Parkinson’s disease participants from healthy
controls using smartphones, IEEE International Conference on Acoustics, Speech
18. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Success Story: PGHD for Care Coordination
IBM Taiwan Collaboratory
19. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
19
Promoting patient activation for behavioral change
(Dietary intake: Burke et al., 05;
Physical activity: Prestwich et al., 09; Michie et al., 09)
Preventing lifestyle-related chronic diseases,
e.g., Type II Diabetes
Helmrich et al, 1991;Bailey, 2001; Scottish Intercollegiate
Guidelines Network, 2001; Finland National Type II Diabetes
Prevention Programme, 2007; American Diabetes
Prevention Program, 2008).
Increase awareness to self-monitoring
(Prestwich et al., 09; Burke et al., 05)
Triggering reminders to care plans
(Consolvo et al. 09; Hurling et al., 07)
Personalizing communication messages and
education materials
(Thaler and Sustein, ‘08)
Making
Sense
of
PGHD
for
Individuals
Nudge: Improving Decisions About Health
PERSONAL INFORMATICS TOOLS
(auto PGHD capturing + manual input)
20. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
2
0
The Failure of Scripps Trial
Patients who monitored their health were less likely to attribute health
outcomes to chance than those who didn’t monitor their health
21. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Where do we meet in the middle?
???
Unsustainable, ill-supported
health consumers
Healthcare Triple aim
22. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
22
Reference Story:
Kaiser Permanente – Improved Outcome and Reduced Co
Individualized Guideline Improved Clinical Outcomes
§ Reduce 5-year CVD risk 2.4 times more than EHR+panel support tool alone (≈ 13% absolute risk reduction)
§ ≈ 6,000 myocardial infarctions (MIs) and strokes prevented annually if applied throughout KP (≈43%
increase over JNC7 guideline for the same cost)
Individualized Guideline Reduced Operational Costs
§ ≈ $7,000 cost savings per MI and stroke
§ ≈ $420M annual net savings if applied throughout KP
Source:
Eddy, et al. (2011). Individualized Guidelines: The Potential for Increasing Quality and Reducing Costs. Annals of Internal Medicine, vol. 154, no. 9, p.627-634.
http://www.annals.org/content/154/9/627.abstract
22
23. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
23
Kaiser Permanente – Improved Patient Motivation
and Adherence, Increased Clinician Confidence
(Respondents were)“…more likely to report that they have been
asked to change their medication, diet and exercise habits. ”
—Patient Survey
“…helped the doctor to motivate them and helped them participate
in their treatment choices, i.e., making lifestyle changes and
understanding the rationale for their suggested interventions.”
— Patient Focus Group
“All doctors agreed that it helps them to make the best clinical
decisions for their patients.”
— Clinician Survey
23
24. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Adding High Touch by Lay Care Guides
• Parallel-group randomized trial (2010-2012).
– 6 primary care clinics in Minnesota.
– Adults with hypertension, diabetes, or heart failure.
– Assigned in a 2:1 ratio to a care guide or usual care.
25. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
HEC/MIE
2016
Workshop:
PuJng
User-‐Generated
Data
in
Ac#on:
Improving
Interpretability
for
Clinical
and
Consumer
Informa#cs
Katie Zhu, PhD MD
(IBM TJ Watson Research, USA)
Sanjoy Dey, PhD
(IBM TJ Watson Research, USA)
Ken Cheung, PhD
(Columbia University, USA)
Bian Yang
(Norwegian University of Science of Technology,
Norway)
Thomas Wetter, PhD (Panel Discussant)
(University of Heidelberg, Germany
University of Washington, USA)
Pei-Yun Sabrina Hsueh, PhD (Moderator)
(IBM T.J. Watson Research, USA)
26. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Agenda
•
16:30-‐16:40
Opening
Remark
by
Dr.
Sabrina
Hsueh
• EMERGING
HEALTHCARE
LANDSCAPE
SHIFT
WITH
PATIENT-‐GENERATED
DATA
•
16:40-‐17:20
Presenta#ons
– Dr.
Xinxin
Zhu:
So
we
got
sensor
data,
now
what?
– Dr.
Sanjoy
Dey:
Enhancing
interpretability
of
computa#onal
model
– Dr.
Ken
Cheung:
SMART-‐AR
to
evaluate
health
apps
for
outcome
op#miza#on
– Dr.
Bian
Yang:
The
need
for
addressing
privacy
issues
with
be6er
interpretable
rules
•
17:20-‐18:00
Discussant
summary
presenta#on
&
Panel
discussion/audience
Q&A
– Dr.
Thomas
We6er:
Pa#ent
generated
data
–
The
transi#on
from
“more”
to
“be6er”
– Panel
discussion
(moderated
by
Dr.
Sabrina
Hsueh)
27. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
SO
WE
GOT
SENSOR
DATA,
NOW
WHAT?
28. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
• MD
(Anesthesiologist)
from
China
Medical
University
• PhD
in
Biomedical
Informa#cs
from
Columbia
University
• Past
Experience
– Chief
Medical
Informa#on
Officer
at
Kforce
Government
Solu#ons,
U.S.A.
– Associate
Medical
Director,
Pfizer
Health
Solu#ons,
U.S.A.
– Senior
Manager,
Pfizer
Health
Solu#ons,
U.S.A.
– Clinical
Program
Manager,
Philips
North
America
Research
Center,
U.S.A.
– Healthcare
Informa#cs
Subject
Ma6er
Expert,
Veterans
Affairs
Medical
Center,
U.S.A.
Xinxin (Katie) Zhu
• Telehealth lead at IBM
Watson
• External Advisory Board
member to Columbia Univ.
Center of Advanced
Technology
29. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
So
we
got
sensor
data,
now
what?
• What
sensor
data
could
help
with
care?
• How
to
determine
when
to
use
what?
• Are
the
sensor
data
reliable?
• What
is
the
context
when
data
were
collected?
• How
to
interpret
data
in
context?
• Clinicians’
concerns
30. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
What
sensor
data
could
help
with
care?
Use
case:
stress
management
Subjec#ve
Stressors
Psychological
Response
Physiological
Response
Stress
Hormones
31. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Many
sensors
are
out
there…
Tinke
31
Approach
• Plug into a smartphone
• Scan finger
• Provide stress/relax index
Data Tracked
• Heart rate variability
• Respiration rate
• Blood oxygen level
Tinke Website
32. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Spire
32
Data Tracked
• Breathing pattern
• Steps
Approach
• Consistent breaths à Calmness
• Uneven breaths à Tension
• Fast and consistent breaths à Focus
• Guided meditation
33. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Pip
33
Data Tracked
• Skin conductance (EDA)
Approach
• Hold device between the
thumb and index fingers
• Stress level via audio/
visual feedback
34. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Many
sensors
are
out
there
Brain
Wave
(EEG sensor)
Skin
Conductance
(EDA sensor)
Blood
Volume
Pulse
(PPG sensor)
Skin Temperature
(Infrared Thermophile)
Heart
Rate
(PPG sensor)
Heart Rate
Variability
(ECG sensor)
Respiration
Rate/Volume
(RIP sensor)
RR Interval
Distribution
(ECG sensor)
Image Source: Neurosky, Empatica, Hexoskin
35. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Hexoskin
V.S.
BioSens
Holter
ECG
Valida#on
36. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Brain
Wave
36
Relaxed Reading a paper with a time limit
Delta
- Adult slow wave sleep
Theta
- Drowsiness, idling, inhibition
Alpha
- Relaxed, reflecting
Beta
- Alert, busy, anxious, thinking
Gamma
- Short term memory usage
Mu
- Rest state motor neuron activity
- Produced by electrical pulses
from neuron communication
- Frequency bands associated
with different behaviors and
emotions
37. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
How
can
people
make
sense
of
these?
37
38. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Clinicians’
concerns
Information overload Unreliable data à false alarms
Clinical workflow
Context, context, context!
39. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Summary
on
Workshop
Theme
(1)
• (1)
Iden#fy
immediate
ac#on
items
to
start
ini#a#ng
proposal
for
enabling
evidence-‐based
conversa#on
with
pa#ents/physicians/providers
in
the
loop
40. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Summary
on
Workshop
Theme
(2)
• 2.
Implica#ons
and
lessons
learned
from
the
case
studies
-‐-‐
especially
the
gaps
you
perceived
as
barriers
of
entry
41. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Summary
on
Workshop
Theme
(3)
• 3.
Requirements
for
successful
redesign
of
healthcare
systems
to
accommodate
pa#ent-‐
generated
informa#on
(with
a
sub-‐goal
of
iden#fying
the
areas
where
such
informa#on
can
make
most
impacts).
42. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Ques#ons
(preliminary)
• 1.
What
is
the
state-‐of-‐the-‐art?
• 2.
What
are
the
benefits
of
improving
interpretability
in
PGHD
in
ac#on?
• 3.
What
the
key
dimension
of
interpretability
of
PGHD?
What
are
the
barriers?
Technical/social?
• 4.
What
is
our
defini#on
of
interpretability?
What
are
the
likely
measures?
• 5.
What
is
the
opportunity
area
going
forward?
• 6.
What
are
the
likely
ac#on
items
to
be
suggested
to
the
community
to
further
the
discussion
about
improving
interpretability
for
PGHD?
– In
the
field
of
consumer
health
informa#cs
or
beyond?
43. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
ENHANCE
INTERPRETABILITY
WITH
PRIOR
KNOWLEDGE
44. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Sanjoy
Dey
PhD.
Postdoctoral Research Scientist, Center of Computational Health, IBM T. J.
Watson Research Center, Yorktown Heights, NY 10598
Sanjoy
Dey’s
research
interests
lie
in
the
areas
of
health
care
informa#cs,
data
mining
and
machine
learning,
especially
in
building
interpretable
models
by
integra#ng
mul#ple
healthcare
datasets.
.
In
par#cular,
Sanjoy
is
interested
in
building
models
which
aim
to
incorporate
domain
knowledge
at
mul#ple
stages
of
model
development
(e.g.,
feature
selec#on,
cohort
selec#on
and
study
design)
so
that
these
models
can
infer
knowledge
that
are
complementary
to
the
already
known
clinical
prac#ces
and
guidelines.
Prior
to
this
posi#on,
he
earned
his
Ph.
D.
from
the
department
of
computer
science
at
university
of
Minnesota.
45. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Improving Interpretability of Patients
Generated Data
45
DiseaseHealthy
Dataset 1 Dataset 2
Class
label
Relation across the datasets
Analysing
the
obtained
results
from
Complex
Models
• Interpret
the
model
parameters
so
that
they
can
be
used
to
infer
meaningful
knowledge
• Visualize
the
obtained
informa#on
from
a
model
in
a
meaningful
way
Taking
prior
knowledge
into
account
• Many
#mes,
medical
knowledge
are
available
containing
useful
rela#onships
among
clinical
events
46. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Dataset
Interpre#ng
Complex
Computa#onal
Models
• Complex
model
parameters
can
be
converted
to
metrics
that
are
easily
understandable
by
domain
experts
– Logis#c
Regression
– LASSO
with
regulariza#on
to
perform
simultaneous
variable
selec#on
•
Logis#c
loss
func#on
can
be
used
as
Log
Odds,
which
can
be
converted
to
Odds
Ra#o
-‐
where
β0
the
log
odds
for
smoking
for
men
• Probabili#es
of
an
event
can
be
viewed
as
clinical
uncertainty
Class Level
Liu et al. 2011, Jeiping Ye et al., 2012
47. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Visualiza#on
of
the
obtained
model
Decision
Boundaries
of
Logis#c
Regression
Rule
based
representa#on
of
Decision
Tree
and
Cart
based
Models
Graphical
Models
for
Disease
Models
Work
Environment
Gene
Disease
Symptom
s
Westra
et
al.
2011,
Manzi
et
al.
2013
48. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Integra#ng
Prior
Knowledge
with
Mul#-‐source
EHR
data
for
Enhancing
Interpretability
Diagnosis
Codes
(ICD-‐9)
Admission
Assessment
Survey
Discharge
Assessment
Survey
Home Healthcare
Dey et al. AMIA 13, Dey et. al., SDM 14, Westra et al. 11
Demographic, behavioral, pathological,
psycho-social factors, outcome variables.
Problem Formulation:
48
260,000 patients
Data source: CMS OASIS dataset
Outcome prediction
49. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Enhancing Interpretability of Patterns
49
Predictive Power
Interpretability
• Interpretability
(Relevance)
and
predic#on
power
are
different
goals
• Prior
rela#onships
present
in
the
data
can
be
incorporated
into
model
ICD-‐9
Group
1
ICD-‐9
Group
2
250.6:
Neurological
manifesta#on
401.1:
Benign
hypertension
290:
Demen#a
838:
Disloca#on
of
foot
331:
Alzheimer’s
disease
692.71:
Sunburn
331.9:
Cerebral
degenera#ons
V58.42:
Hip
joint
replacement
Neural disorders No common underlying disease
Interpretable
Predic8ve
• Which
group
of
pa#ents
are
likely
to
improve
ambula#on?
• Are
those
factors
clinically
interpretable
and
make
a
homogeneous
group?
G1
G2
Ideal
50. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Proposed Approach
Key
Steps:
• Integrate
both
survey
data
from
EHR
and
ICD-‐9
diagnoses
codes
to
predict
the
improvement
of
urinary
incon#nence
• Use
clinical
prior
knowledge
such
as
Clinical
Classifica#on
Sotware
(CCS)
into
account
to
increase
the
interpretability
• Develop
a
sta#s#cal
technique
called
Sparse
Hierarchical
Canonical
Correla#on
Analysis
(SHCCA)
to
address
these
challenges
50
X Y
Algorithm:
• Take
the
hierarchy
of
the
CCS
tree
into
account
to
define
a
similarity
matrix
called
H
among
the
ICD-‐9
codes
• Trade-‐off
between
the
data-‐driven
and
prior
knowledge
driven
similarity
of
ICD-‐9
codes
using
λh
• Converted
into
convex
formula#ons
• Solve
the
final
equa#on
based
on
gradient
descent
formula#on
Prior
Knowledge
λh trades off between domain-
driven and data-driven
knowledge
Dey et. al., SDM 14
51. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Sparse Hierarchical CCA (SHCCA)
Parameter
Selec8on:
• Op#mize
the
parameters
using
cross-‐valida#on
such
that
it
op#mizes
the
correla#on
on
valida#on
data
Evalua8on:
Predic8on
power:
how
well
the
selected
group
of
ICD-‐9
codes
can
predict
the
improvement
of
outcome
Interpretability:
– I-‐score
based
on
the
co-‐occurrences
of
the
ICD-‐9
terms
belonging
to
a
group
C
in
PubMed
ar#cles
– Domain
knowledge
by
physicians
and
nurses
51
ti is the set of articles found with ICD-9 code i
I-‐score(C)=∑𝑖ϵ 𝐶↑▒∑𝑗ϵ 𝐶↑▒| 𝑡↓𝑖 ⋂ 𝑡↓𝑗 |/| 𝑡↓𝑖 ∪ 𝑡↓𝑗 |
52. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Results
• SHCCA
has
similar
performances
as
the
baseline
methods,
but
with
fewer
components
• It
enhances
the
interpretability
significantly
Predictive power of SHCCA
52
53. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Components from SHCCA
Survey
data
1
ICD-‐9
codes
1
Survey
data
2
ICD-‐9
codes
2
Age,
Prior
Memory
Loss,
Poor
Speech,
Poor
Cogni8ve
Func8on,
High
Confusion,
Memory
Deficiency,
Frequent
Behavioral
Problem
Demen8as,
Persistent
mental
disorders,
Alzheimer's
disease,
Cerebral
degenera8ons
Surgical
Wound,
Fully
granulated
Surgical
Wound
Acercare
for
healing
fracture
of
hip,
Knee
joint
replacement,
Hip
joint
replacement,
Acercare
following
surgery
of
the
musculoskeletal
system,
Acercare
following
joint
replacement,
Acercare
following
surgery
for
neoplasm,
Acercare
following
surgery
of
the
circulatory
system
53
Component relevant to
Mental health
Component relevant to surgical treatment
54. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Summary
&
Limita#ons
• Summary
– Predic#on
power
and
interpretability
are
two
different
goals,
which
are
oten
hard
to
achieve
by
computa#on
models
simultaneously
– Predic#ve
models
can
be
post-‐processed
and
visualized
to
make
them
more
interpretable
– Leveraging
clinical
prior
knowledge
such
as
Clinical
Classifica#on
Sotware
(CCS)
into
account
can
increase
the
interpretability
substan#ally
• Limita#ons
– The
defini#on
of
interpretability
is
oten
subjec#ve
and
oten
requires
domain
exper#se
– Prior
knowledge
about
a
par#cular
problem
is
not
oten
readily
available
in
many
clinical
applica#ons
– Use
of
prior
knowledge
into
the
model
op#miza#on
is
oten
not
straighvorward
54
55. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
SMART-‐AR
to
evaluate
health
apps
for
outcome
op#miza#on
Ken
Cheung
Columbia
University
56. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Ying
Kuen
(Ken)
Cheung
• PhD
in
Sta#s#cs
(U
Wisconsin,
Madison
WI,
USA)
• Professor
of
Biosta#s#cs,
Columbia
University,
New
York
NY,
USA
• General
interest:
Transla#onal
research
in
all
phases
• Specific
areas
• Dose
and
treatment
selec#on
in
adap#ve
clinical
trials
• Op#mal
behavioral
interven#on
for
secondary
stroke
preven#on
• Analysis
of
high-‐dimensional
physical
ac#vity
data
• N-‐of-‐1
trial
designs
• Evalua#on
and
dissemina#on
of
mobile
technologies
for
mental
health
57. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Objec#ve
&
Reinforcement
Learning
• Data
sequence:
(X,
A1,
U1,
A2,
U2,
…,
AK,
Y)
– X
=
Individual
characteris#cs
– At
=
Apps
downloaded
(Ac#on)
at
#me
t
– Ut
=
response
and
use
pa6ern
between
At
and
At+1
– Y
=
Final
outcome
(depression
reduc#on)
• Objec#ve:
Iden#fy
the
sequence
At
based
on
X
and
Ut
so
as
to
maximize
Y
(on
average)
• Reinforcement
learning:
Q-‐learning,
OWL,
etc.
58. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
SMART
Design
• SMART
(Sequen#al
Mul#ple
Assignment
Randomized
Trial)
App
1
App
2
Ac#ve
use
Ac#ve
use
Non-‐use
Non-‐use
App
1
+
App
3
App
2
App
2
+
App
3
App
2
+
reminder
App
1
App
1
+
reminder
App
2
App
3
Depression
reduc8on
at
6
months,
Y
Enrichment
based
on
intermediate
use
paeern,
U
P
=
2/3
P
=
1/3
P
=
0.3
P
=
0.7
P
=
0.6
P
=
0.4
P
=
0.6
P
=
0.4
P
=
0.3
P
=
0.7
59. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
SMART-‐AR
Design
(Cheung
et
al,
2015
Biometrics)
• SMART
Design
ü Allows
learning
✗ No
feedback
to
system
✗ Curse
of
dimensionality:
many
apps
in
prac#ce
• SMART-‐AR
• AR
=
Adap#ve
randomiza#on
• Assign
more
users
to
more
promising
branches
• Curse
of
dimensionality:
Sot
elimina#on
of
poor
performing
apps
à
Improve
signal-‐noise
ra8o,
hence
interpretability
of
the
recommender
0 20 40 60 80 100
9101112131415
Enrollment number
BDIreduction
o o o o o o o o o o o o
+ + + + + + + + + + + +
p p p p p p p p p p p p
m m m m m m m m m m m m
Scenario 1
CODIACS
Balanced
Application in conventional depression program
Cheung et al, 2015 Biometrics
60. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Some
Simula#on
Illustra#on
Non-‐adap8ve
SMART
SMART-‐AR
Balanced
randomiza#o
n
CODIACS
randomiza#o
n
Scenario
1
Probability
of
iden#fying
the
op#mal
sequence
0.91
0.94
0.95
Expected
adjusted
value*
0.98
0.99
0.99
Variance
of
adjusted
value
3.1
2.3
1.3
Scenario
3
Probability
of
iden#fying
the
op#mal
sequence
0.53
0.51
0.51
Expected
adjusted
value*
0.95
0.95
0.96
Variance
of
adjusted
value
8.5
11.0
7.4
61. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Health
informa#cs
support
issues
• SMART-‐AR
requires
real
#me
transmission
between
data
site,
apps
cura#on
site,
compu#ng
site
– Large
volume:
Use
data
pre-‐processing
– Privacy
&
security
• Health
outcomes
– Valida#on
of
outcomes
0 10 20 30 40
Days since download first app
AppID
1234567891011121314
62. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
ADDRESSING
PRIVACY/SECURITY
CONCERN
WITH
INTERPRETABILITY
63. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Bian’
intro
goes
here….
64. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
- February 4, 2015
- Hacker broke into the medical
insurance database
- 80 million records stolen in
plaintext
- Insurance company’s database
are not required to be encrypted
by HIPAA
- administrator's credentials were
compromised
65. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Now
…
the
hot
term
for
2016
–
«ransomware»
- More than half of hospitals (in US)
hit with ransomware in last 12
months
(HealthcareITNews, April 07, 2016)
- Good business model for the hackers
- Low risk
- Good cost-benefit efficiency
- Easy to build "reputation" for
the service –
(https://www.theguardian.com/technology/
2016/feb/17/los-angeles-hospital-hacked-
ransom-bitcoin-hollywood-presbyterian-
medical-center)
66. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
A6ack
vectors
to
Pa#ent
Data
Security
More attacking vectors opened due to …
the shifts of healthcare patterns - now and future
• hospital -> home / cyber space (telemedicine, IoT, mobile
technologies, care research)
• in-hospital treatment -> prevention (big data, health analytics,
health electronics, e-drugs)
• doctor-centered -> patient-centered (telemedicine, big data,
machine intelligence, cloud storage and computing)
• health care organizations -> associated business partners in
liability (law and regulations, e.g., HIPAA -> HITECH (2009))
• Local service -> global service (service across the borders)
• the “SafeHarbor” agreement
• Facebook fined by the Belgian court
67. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
What
does
security
mean
for
eHeath/mHealth’s
future
- new breaches and "business models for hacking" would
continue to come… (but take it easy)
- More liability to IT tech enablers and business associates
(e.g, HIPAA ->HITECH)
- cloud / SDN makes "security as a service" that can be
outsourced
- IT Tycoons (Microsoft, IBM, Google, etc.) could finally
take it over (capable to take risk, more resources, global
threat intelligence, etc.)
68. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Future
Solu#ons
- Data ownership re-definition
- Generating incentives for industry to migrate from
data silos to data sharing
- Patients’ awareness of their interests in their own
data
- Patients’ convenience in accessing their own data
- Legal support
- Technology: security / privacy by design
69. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
DISCUSSANT
SUMMARY
PRESENTATION
70. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Prof.
Dr.
Thomas
Weeer
• MSc
/
PhD
in
mathema8cs
from
Aachen
Technical
U,
Germany
• PostDoc
with
IBM
Scien#fic
Center
Heidelberg,
Germany
• Since
1997
Prof.
of
Medical
Informa8cs,
Heidelberg
U
– Interna8onal
assignments
to
Boca
Raton
(FL),
Aus#n
(TX),
Salt
Lake
City
(UT),
Sea6le
(WA)
– Affil.
Faculty
with
Dept.
BIME,
U
of
Washington,
Sea6le
– Author
of
textbook
Consumer
Health
Informa#cs:
New
Services,
Roles
and
Responsibili#es;
Heidelberg
(Springer)
2015
(eBook)
resp.
2016
(Hardcover)
71. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Pa#ent
generated
data
–
The
transi#on
from
“more”
to
“be6er”
Thomas
We6er
May be obsolete here with the title slide already
using this paraphrase of the workshop title
72. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Growth
is
everywhere
• More
modali#es
to
collect
and
store
data
are
offered
• More
communica#on
media
carry
health
info
• More
condi#ons
suggest
to
be
monitored
• More
ins#tu#ons
consider
usage
• More
consumers
buy
in
• Does
this
make
sense?
• How
can
we
move
towards
meaningful
ac#on?
• How
can
we
protect
against
unethical
exploita#on?
73. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Growth
is
everywhere
• More
modali#es
to
collect
and
store
data
are
offered
• More
communica#on
media
carry
health
info
• More
condi#ons
suggest
to
be
monitored
• More
ins#tu#ons
consider
usage
• More
consumers
buy
in
• Does
this
make
sense?
• How
can
we
move
towards
meaningful
ac#on?
• How
can
we
protect
against
unethical
exploita#on?
74. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
data
is
more
op#ons
.
75. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
data
is
more
op#ons
Period
76. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
But
beware
Date
are
not
the
world;
data
map
the
world
–
truthfully?
What
is
the
ci#zen‘s
contribu#on
to
the
mapping?
• Carrier
of
implanted
sensors
• Operator
of
a6ached
and
mobile
sensors
• Witness
of
health
signs
• Interpreter
of
health
signs
• Self
therapist
• Health
plan
contractor
77. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
data
is
more
tempta#ons
Ci#zens
• Trust
more
than
warranted
• Shit
focus
from
senses
to
data
Clinicians
• Shit
focus
from
senses
to
data
Researchers,
public
health
• Urge
to
find
something
Big
business
• More
big
business
78. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
data
is
more
tempta#ons:
Ci#zens
Percep#on
of
the
presumably
unfailable
objec#ve
givens
as
proxy
for
truth
• Mental
fixa#on
on
data
• Unwarranted
trust
as
decision
aid
• Adverse
reac#on
to
contradictary
data
• Overreac#on
upon
alarming
data
79. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
data
is
more
tempta#ons:
Researchers,
Public
health
Percep#on
that
regarding
the
massive
volume
of
data
there
cannot
be
no
effects
• Do
the
big
data
mechanics
• Spot
peculiari#es
• Publish
results
Knowing
that
5%
of
significant
studies
are
not
substan#ated
through
an
effect
Curb: Complexity reduction –
Sanjoy Rey, Ken CheungRisk: Blindfolded actionism
Curb: Plausibility, context – Katie Zhu
Risk: Funding agency expectations Curb: Research ethics
80. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
data
is
more
expecta#ons
If
scien#st
dispose
of
more
data
their
methods
are
challenged:
• Profound
interpreta#on
and
predic#on
–
Sanjoy
Dey
• Parsimony,
wise
selec#on
–
Sanjoy
Dey
• Secure
storage/communica#on
–
Bian
Yang
• Insight
–
Ken
Cheung,
Sabrina
Hsueh
81. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
is
more
expecta#ons
If
ci#zens
volunteer
their
data,
they
expect
services:
• Serious
PGHD
into
PHR
into
EHR
integra#on
• No
data
leakage
• Explana#ons
of
the
unexplainable
• Emergency
rescue
in
response
to
alarming
data
82. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
More
data
can
be
the
hays#ck
• where
we
don‘t
find
the
needle
• while
being
distracted
by
–
hay
• but
someone
needs
the
needle
–
now
83. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Claude
Shannon
1948
1)
„Informa#on
is
that
which
reduces
uncertainty“
Which
the
needle
in
the
hays#ck
does
not
do
1) A mathematical theory of communication
Bell Systems Technical Journal
84. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Bring
forth
the
signal
from
the
noise
• Concentrate
trials
on
treatments
with
emerging
posi#v
prognosis
(Ken
Cheung)
• Select
data
with
high
interpreta#ve
or
predic#ve
power
(Sanjoy
Dey)
• Regard
context
to
detect
noise
(Ka#e
Zhu)
85. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Are
we
achieving
quality
that
sa#sfies
doctors?
• Not
a
ma6er
of
taste
• Doctors‘
code
of
conduct
regulates
that
when
trea#ng
diagnosed
pa#ents
he
– assumes
responsibility
for
correct
recordings
of
devices
he
hands
to
the
pa#ents
– has
to
waive
liability
for
data
generated
through
other
pa#ent
solicited
devices
while,
when
coaching
for
healthy
lifestyle
– anything
goes
86. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Are
we
achieving
quality
that
sa#sfies
doctors?
• Under
a
treatment
contract
a
doctor
is
held
responsible
for
medical
errors.
• Morally,
he
cannot
be
held
responsible
for
decisions
based
on
false/faked
data
from
outside
his
control
• Pa#ents
want
their
data
used
• They
cannot
guarantee
correct
data
• A
classical
gridlock
1)
1) In NY/NY en.wikipedia.org/wiki/Gridlock
87. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Who
can
do
what
to
solve
the
gridlock?
88. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Are
we
achieving
full
transparency?
Do
we
want
it?
Imagine
that
a
certain
set
of
sensor
data
is
so
characteris#c
of
you
that
you
need
not
register,
just
deliver
a
sample
and
they
know
who
you
are.
89. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Are
we
suppor#ng
personalized
medicine?
• If
the
wealth
of
our
data
is
so
large
that
we
can
iden#fy
data-‐twins
– A
treatment
for
the
second
twin
should
work
if
it
did
for
the
first
– The
end
of
clinical
trials
90. Putting User Generated Data in Action: Improving Interpretability for Clinical and Consumer Informatics
Thank You
Merci
Grazie
Gracias
Obrigado
Danke
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