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Dr Ajeet Kumar Gandhi
MD (AIIMS, New Delhi);DNB;MNAMS; UICCF (MSKCC,USA)
Assistant Professor, Department of Radiation Oncology
Dr Ram Manohar Lohia Institute of Medical Sciences, Lucknow
(http://www.drrmlims.ac.in/radiationoncology1.php#)
Ex-Senior Resident, Dept. of Radiation Oncology, AIIMS, New Delhi
05/01/17 1
Overview of thepresentation
• Introduction
– Head and Neck cancers: Theneed for Research
– Biomarkersand Molecular Classification
• Roleof Biomarkersin
– Diagnosisand screening
– Prognosisand prediction
– Therapeutic targetsand recent concepts
– Detection of recurrencesand follow up
• Conclusion
05/01/17 2
Around 6.4 lakh cases of head and neck cancers diagnosed world wide per year
Around 1.5 lakh cases diagnosed in India per year accounting for ~20 % of all cancer cases
05/01/17 3
HN Ca: Disease Presentation
Stage1
Rate(%) TNM2
Rate(%)
At Presentation
Early(I-II) 15-30 T1-2
20
LA(III-IV) 60-80 T3-4
80
Metastatic 2-15 N0-1 54
1. Choong N. CA 2008;58:32-53.
2. Mohanti et al. JLO 2007; 121:49-56
405/01/17
Head and Neck Ca: Failureand
Detection
• Estimated Loco-regional failure rates between 20-50% after
multimodality therapies and ~30% for surgery f/b PORT
– Calais G, Bardet E, Sire C. IJROBP 2004;58:161-166
– Lefebvre JL, Chevalier D, Luboinski B. JNCI.1996;88:890-
899
– Forastiere AA, Goepfert H, Maor M. NEJM.2003;349:2091-
2098
• Detecting Recurrences:
– Clinical Examination
– CT Surveillance
– 18F FDG PET/CT
505/01/17
What areBiomarkers??
• A biomarker isamolecular or tissue-based processthat
providesfuturebehaviour of acancer but requiresa
special assay that isbeyond routineclinical,
radiographic, or pathologic examination
• Tumor markerscan bemeasured at multiplelevels:
DNA, RNA, protein, cell, and tissue.
– DNA-based marker assays: FISH,PCR
– RNA-based marker assays: RT-PCR
– Protein-based markers: IHC
– Detection of abnormal tissueprocessesinduced by an
existing cancer, such asneovascularization
05/01/17 6
What`san ideal biomarker??
• Ability to diagnosecancersand pick up
recurrencesin asymptomatic cases
• Should beprognostic and predictive
• Serveasatherapeutic target
05/01/17 7
Biology of HNCa: Multistep
carcinogenesisand Molecular
Heterogeneity
05/01/17 8
Heterogeneity of HNCa
• morethan 95% of head and neck cancersare
squamouscell carcinomassuggeststhat it isa
relatively homogeneousdisease
05/01/17 9
Loss of chromosomal region
9p21 is found in 70%–80% of cases, thus representing
the most common genetic alteration seen in
squamous dysplasia and HNSCC
05/01/17 10
Genetic Alterations:Head and Neck
cancers
05/01/17 11
05/01/17 12
TowardsPersonalization
05/01/17 13
Biomarkersfor Diagnosis
• Diagnosisof NPCa:
– VCA IgA
– Gp78 + VCA Ig + EBNA Ig
– EBER (EBV encodeRNA)
05/01/17 14
Predictive& Prognostic Factors
• PredictiveFactors:
– ERCC1:Cisplatin sensitivity
– β Tubulin Isoform III: Taxanesensitivity
– HPV: Responseto CT and CTRT
– EGFR(?): Cetuximab sensitivity and responseto therapy
– (?)BCL-Xl: Larynx preservation and completeresponse
– (?)TIMP3 Methylation,RASSF1A/2A,CDH1 Methylation:
Predicting responseto radiation
• Prognostic Facors:
– EGFR
– HPV
– TGF-α , Bcl-2, Cyclin D1, CDH 1 Methylation(??)
05/01/17 15
05/01/17 16
05/01/17 17
05/01/17 18
Biomarkers:Prognostication
• EBV titre<1,500 copies/mL had increased OS
and RFS. Persistently elevated EBV titre1
week after completion of sequential chemoRT
had worseOS, RFS*
*Lin JC. N Engl JMed 2004;350(24):2461-
2470.
**Leung SF.JClin Oncol 2008;24:5414-
5418.
05/01/17 19
HPV
05/01/17 20
 Subset analysis of patients enrolled in RTOG 0129 trial. (CFRT vs.
AcFRT).
 Total OPC were 60.1% of all patients (n=433).
 HPV status evaluated in 74% of all ca OPx patients (n=323).
 HPV DNA was detected in 63.8% of patients’ tumors (206 of the 323)
by means of FISH, and 96.1% of the samples (198 of 206) were positive
for HPV-16.
05/01/17 21
05/01/17 22
ECOG 2399: HPV RESULTS
HPV + HPV -
OPC 38 (60%) 24
Lx 0 34
Total 38 (40%) 58 (60%)
 HPV + patients had higher PS (ECOG “0” in 66% of HPV +ve vs. 33% in
HPV –ve.
 Patients with HPV-positive tumors were more likely to report less than 20
pack-years of cigarette use (37% vs 0%, respectively, P < .001).
 HPV +ve patients were having more lingual or palatine tonsil primary
(84% vs 63%, respectively, P =0 .07) .
05/01/17 23
Oropharynx Tumour, HPV Status And 2 year survival:
ECOG 2399 STUDY
05/01/17 24
Summary of HPV Trials
05/01/17 25
ONGOING TRIALS ON HPV + OPC:
De-intensification
ECOG 1308 ( Phase II RCT)
RTOG 1016 – PHASE III RCT
• Locally advanced OPC (n=700)
•Randomization is stratified by low
and high T stage, low and high N
stage, and smoking history (</> 10
pack years)
•Both arms of this trial will use
accelerated fractionation IMRT (70
Gy in 6 weeks).
•The control arm will receive two
cycles of Cisplatin, and the
experimental arm will receive weekly
Cetuximab.
Stage III-IVB
HPV + OPC
(n=83)
3 cycles of ICT with
Taxol + CDDP+ Erbitux
CR+
54Gy of CF
IMRT+Erbitux
CR-
AF IMRT (69.6
Gy/33 Fr)
05/01/17 26
• Head and Neck cancersdocumented to have
HPV-16 virusin their tumorsand suitablefor
Neoadjuvant CTRT f/b Therapeutic neck
disection
05/01/17 27
EGFR Pathway
05/01/17 28
05/01/17 29
Cetuximab in Recurrent head and
neck cancers
05/01/17 30
EGFR: Why wehavefailed to
deliver??
• EGFR: Do weneed assaysand quantification
of marker
• EGFR : Resistancepathwaysand downstream
signalling
05/01/17 31
EGFR: Prognostic marker and
predictor for loco-regional relapse
05/01/17 32
05/01/17 33
05/01/17 34
EGFR: ResistancePathways
• Activation of ERBB2 signaling
• Mutant EGFR vIII
• AuroraKinaseActivation
• ERK/AKT activation by IGFR-1
• Src/STAT mediated transactivation of EGFR
05/01/17 35
EGFR vIII
• EGFRvIII hasbeen detected in up to 40% of
SCCHN cases.
• In vitro, cellsthat expressEGFRvIII havebeen
shown to belesssensitiveto thegrowth-
inhibiting effectsof cetuximab.
• EGFRvIII mutationsarealatestageevent
caused by therapid proliferation induced by
wild-typeEGFR overexpression.
05/01/17 36
An open-label, randomized, study of h-R3mAb
(nimotuzumab) in patients with advanced (stage IIIor
IVa) squamous cell carcinoma of head and neck (SCCHN):
Four-yearsurvival results from a phase IIb study. JClinOncol
28:15s,2010(suppl; abstr5530)
• Presented in ASCO 2010
• 133 patientsof stageIII-IVaHNSCC
• Dose: RT-60-66 Gy/2 Gy/#/5# per week
Cisplatin-50mg/week x 6
Nimotuzumumab-200mg iv/hr weekly x 6
CTRT+nim CTRT RT+nim RT alone
Locoregional
response
rate(%)
100 70 76 37
OS rate (%) 47 21 (p – 0.01) 34 13 (p – NS)
Median OS (mo) NR 21.9 14.3 12.7
FU period - 4
years
05/01/17 37
STAT3 Pathway
05/01/17 38
Radioresistance
• PI3/AKT Pathway up regulated in irradiated
tumors:
– Intrinsic radio-resistance
– Tumor cell proliferation
– Hypoxia:HIF-1 α mediated
05/01/17 39
Biomarkersand HNCaSurgery
05/01/17 40
05/01/17 41
05/01/17 42
Avenuesfor Newer Research
• Stem cell markers:
– In early stagelaryngeal cancer treated with
radiotherapy alone, expression of theputativestem
cell marker CD44 wasshown to predict local control
– 2 stem cell markersGRP78 (heat shock 70kDaprotein
5) and NANOG correlated with aworseprognosisin
HNSCC treated with surgery with or without
radiotherapy or chemotherapy
• EMT (Epithelial to Mesenchymal Transition)
• Epigenetic Modifications
05/01/17 43
Biomarkers: Therapeutic Targets
• EGFR Pathway:
– Cetuximab
– Panitumumab,Zalutumumab,Nimotuzumab
• Small MoleculeInhibitor of TK:
– Gefitinib,Erlotinib
– Lapatinib, Afatinib(IrreversibleIsof EGFR and HER2),
Dacomitinib (IrreversibleIsof HER1-4)
• IGF Pathway : Figitumumab
• VEGF Pathway: Bevacizumab, Cediranib, Sorafenib,
Sunitinib, Pazopinib
• Non-Receptor Targets: PI3 Is/src kinaseIs,Dasatinib
05/01/17 44
05/01/17 45
Key Conclusions: I
• ERCC1 expression: Expression may berelevant for
responseto platinum therapy, needsfurther validation.
• β-Tubulin Expression :of certain isotypesmay influence
responseto taxanes, needsfurther validation.
• HPV Strong prognostic factor, warrantsdedicated trial
designs
• EGFRPathway:
• EGFR Expression isuniversal in SCCHN ; over expression
isanegativeprognostic factor after RT.
• Quantification of EGFR expression needsfurther study.
• EGFRvIII May affect sensitivity to cetuximab, not yet
validated in theclinic.
05/01/17 46
Early Diagnosis
of Cancer:
p16/p53/LOH 18q
VCA IgA,EBER
Predicting Response
to concurrent
Therapy:
ERCC1/RRM1
β- Tubulin Isoform
III
HPV
EGFR
Therapeutic Targets
and Overcoming
Resistance:
EGFR/HER2/VEGF
EGFRvIII/Aurora
kinase
Tailored Treatment
HPV+ve Tumors
HPV –ve, High CIN
HPV –ve , Low CIN
EGFR Pathway
Signature type
EXPLORING
BIOMARKERS IN HNCa
EXPLORING
BIOMARKERS IN HNCa
Better Therapeutic
Ratio
Tailored Treatment:
RTin Molecular+ve
margins
RTto N0 Neck in
STAT3 Mut
05/01/17 47
Association
between HPV status
and EGFR targeting??
 Adequate
radiation dose
fractionation
and Dose??
Patient selection
based on biomarkers
for therapy???
 Combination of
chemoRT with
EGFR targeting???
EXPLORING
BIOMARKERS IN HNCa
Unanswered
Questions???
05/01/17 48
Thank yo uThank yo u
05/01/17 49

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Biomarkers in head and neck cancers final ajeet

  • 1. Dr Ajeet Kumar Gandhi MD (AIIMS, New Delhi);DNB;MNAMS; UICCF (MSKCC,USA) Assistant Professor, Department of Radiation Oncology Dr Ram Manohar Lohia Institute of Medical Sciences, Lucknow (http://www.drrmlims.ac.in/radiationoncology1.php#) Ex-Senior Resident, Dept. of Radiation Oncology, AIIMS, New Delhi 05/01/17 1
  • 2. Overview of thepresentation • Introduction – Head and Neck cancers: Theneed for Research – Biomarkersand Molecular Classification • Roleof Biomarkersin – Diagnosisand screening – Prognosisand prediction – Therapeutic targetsand recent concepts – Detection of recurrencesand follow up • Conclusion 05/01/17 2
  • 3. Around 6.4 lakh cases of head and neck cancers diagnosed world wide per year Around 1.5 lakh cases diagnosed in India per year accounting for ~20 % of all cancer cases 05/01/17 3
  • 4. HN Ca: Disease Presentation Stage1 Rate(%) TNM2 Rate(%) At Presentation Early(I-II) 15-30 T1-2 20 LA(III-IV) 60-80 T3-4 80 Metastatic 2-15 N0-1 54 1. Choong N. CA 2008;58:32-53. 2. Mohanti et al. JLO 2007; 121:49-56 405/01/17
  • 5. Head and Neck Ca: Failureand Detection • Estimated Loco-regional failure rates between 20-50% after multimodality therapies and ~30% for surgery f/b PORT – Calais G, Bardet E, Sire C. IJROBP 2004;58:161-166 – Lefebvre JL, Chevalier D, Luboinski B. JNCI.1996;88:890- 899 – Forastiere AA, Goepfert H, Maor M. NEJM.2003;349:2091- 2098 • Detecting Recurrences: – Clinical Examination – CT Surveillance – 18F FDG PET/CT 505/01/17
  • 6. What areBiomarkers?? • A biomarker isamolecular or tissue-based processthat providesfuturebehaviour of acancer but requiresa special assay that isbeyond routineclinical, radiographic, or pathologic examination • Tumor markerscan bemeasured at multiplelevels: DNA, RNA, protein, cell, and tissue. – DNA-based marker assays: FISH,PCR – RNA-based marker assays: RT-PCR – Protein-based markers: IHC – Detection of abnormal tissueprocessesinduced by an existing cancer, such asneovascularization 05/01/17 6
  • 7. What`san ideal biomarker?? • Ability to diagnosecancersand pick up recurrencesin asymptomatic cases • Should beprognostic and predictive • Serveasatherapeutic target 05/01/17 7
  • 8. Biology of HNCa: Multistep carcinogenesisand Molecular Heterogeneity 05/01/17 8
  • 9. Heterogeneity of HNCa • morethan 95% of head and neck cancersare squamouscell carcinomassuggeststhat it isa relatively homogeneousdisease 05/01/17 9
  • 10. Loss of chromosomal region 9p21 is found in 70%–80% of cases, thus representing the most common genetic alteration seen in squamous dysplasia and HNSCC 05/01/17 10
  • 11. Genetic Alterations:Head and Neck cancers 05/01/17 11
  • 14. Biomarkersfor Diagnosis • Diagnosisof NPCa: – VCA IgA – Gp78 + VCA Ig + EBNA Ig – EBER (EBV encodeRNA) 05/01/17 14
  • 15. Predictive& Prognostic Factors • PredictiveFactors: – ERCC1:Cisplatin sensitivity – β Tubulin Isoform III: Taxanesensitivity – HPV: Responseto CT and CTRT – EGFR(?): Cetuximab sensitivity and responseto therapy – (?)BCL-Xl: Larynx preservation and completeresponse – (?)TIMP3 Methylation,RASSF1A/2A,CDH1 Methylation: Predicting responseto radiation • Prognostic Facors: – EGFR – HPV – TGF-α , Bcl-2, Cyclin D1, CDH 1 Methylation(??) 05/01/17 15
  • 19. Biomarkers:Prognostication • EBV titre<1,500 copies/mL had increased OS and RFS. Persistently elevated EBV titre1 week after completion of sequential chemoRT had worseOS, RFS* *Lin JC. N Engl JMed 2004;350(24):2461- 2470. **Leung SF.JClin Oncol 2008;24:5414- 5418. 05/01/17 19
  • 21.  Subset analysis of patients enrolled in RTOG 0129 trial. (CFRT vs. AcFRT).  Total OPC were 60.1% of all patients (n=433).  HPV status evaluated in 74% of all ca OPx patients (n=323).  HPV DNA was detected in 63.8% of patients’ tumors (206 of the 323) by means of FISH, and 96.1% of the samples (198 of 206) were positive for HPV-16. 05/01/17 21
  • 23. ECOG 2399: HPV RESULTS HPV + HPV - OPC 38 (60%) 24 Lx 0 34 Total 38 (40%) 58 (60%)  HPV + patients had higher PS (ECOG “0” in 66% of HPV +ve vs. 33% in HPV –ve.  Patients with HPV-positive tumors were more likely to report less than 20 pack-years of cigarette use (37% vs 0%, respectively, P < .001).  HPV +ve patients were having more lingual or palatine tonsil primary (84% vs 63%, respectively, P =0 .07) . 05/01/17 23
  • 24. Oropharynx Tumour, HPV Status And 2 year survival: ECOG 2399 STUDY 05/01/17 24
  • 25. Summary of HPV Trials 05/01/17 25
  • 26. ONGOING TRIALS ON HPV + OPC: De-intensification ECOG 1308 ( Phase II RCT) RTOG 1016 – PHASE III RCT • Locally advanced OPC (n=700) •Randomization is stratified by low and high T stage, low and high N stage, and smoking history (</> 10 pack years) •Both arms of this trial will use accelerated fractionation IMRT (70 Gy in 6 weeks). •The control arm will receive two cycles of Cisplatin, and the experimental arm will receive weekly Cetuximab. Stage III-IVB HPV + OPC (n=83) 3 cycles of ICT with Taxol + CDDP+ Erbitux CR+ 54Gy of CF IMRT+Erbitux CR- AF IMRT (69.6 Gy/33 Fr) 05/01/17 26
  • 27. • Head and Neck cancersdocumented to have HPV-16 virusin their tumorsand suitablefor Neoadjuvant CTRT f/b Therapeutic neck disection 05/01/17 27
  • 30. Cetuximab in Recurrent head and neck cancers 05/01/17 30
  • 31. EGFR: Why wehavefailed to deliver?? • EGFR: Do weneed assaysand quantification of marker • EGFR : Resistancepathwaysand downstream signalling 05/01/17 31
  • 32. EGFR: Prognostic marker and predictor for loco-regional relapse 05/01/17 32
  • 35. EGFR: ResistancePathways • Activation of ERBB2 signaling • Mutant EGFR vIII • AuroraKinaseActivation • ERK/AKT activation by IGFR-1 • Src/STAT mediated transactivation of EGFR 05/01/17 35
  • 36. EGFR vIII • EGFRvIII hasbeen detected in up to 40% of SCCHN cases. • In vitro, cellsthat expressEGFRvIII havebeen shown to belesssensitiveto thegrowth- inhibiting effectsof cetuximab. • EGFRvIII mutationsarealatestageevent caused by therapid proliferation induced by wild-typeEGFR overexpression. 05/01/17 36
  • 37. An open-label, randomized, study of h-R3mAb (nimotuzumab) in patients with advanced (stage IIIor IVa) squamous cell carcinoma of head and neck (SCCHN): Four-yearsurvival results from a phase IIb study. JClinOncol 28:15s,2010(suppl; abstr5530) • Presented in ASCO 2010 • 133 patientsof stageIII-IVaHNSCC • Dose: RT-60-66 Gy/2 Gy/#/5# per week Cisplatin-50mg/week x 6 Nimotuzumumab-200mg iv/hr weekly x 6 CTRT+nim CTRT RT+nim RT alone Locoregional response rate(%) 100 70 76 37 OS rate (%) 47 21 (p – 0.01) 34 13 (p – NS) Median OS (mo) NR 21.9 14.3 12.7 FU period - 4 years 05/01/17 37
  • 39. Radioresistance • PI3/AKT Pathway up regulated in irradiated tumors: – Intrinsic radio-resistance – Tumor cell proliferation – Hypoxia:HIF-1 α mediated 05/01/17 39
  • 43. Avenuesfor Newer Research • Stem cell markers: – In early stagelaryngeal cancer treated with radiotherapy alone, expression of theputativestem cell marker CD44 wasshown to predict local control – 2 stem cell markersGRP78 (heat shock 70kDaprotein 5) and NANOG correlated with aworseprognosisin HNSCC treated with surgery with or without radiotherapy or chemotherapy • EMT (Epithelial to Mesenchymal Transition) • Epigenetic Modifications 05/01/17 43
  • 44. Biomarkers: Therapeutic Targets • EGFR Pathway: – Cetuximab – Panitumumab,Zalutumumab,Nimotuzumab • Small MoleculeInhibitor of TK: – Gefitinib,Erlotinib – Lapatinib, Afatinib(IrreversibleIsof EGFR and HER2), Dacomitinib (IrreversibleIsof HER1-4) • IGF Pathway : Figitumumab • VEGF Pathway: Bevacizumab, Cediranib, Sorafenib, Sunitinib, Pazopinib • Non-Receptor Targets: PI3 Is/src kinaseIs,Dasatinib 05/01/17 44
  • 46. Key Conclusions: I • ERCC1 expression: Expression may berelevant for responseto platinum therapy, needsfurther validation. • β-Tubulin Expression :of certain isotypesmay influence responseto taxanes, needsfurther validation. • HPV Strong prognostic factor, warrantsdedicated trial designs • EGFRPathway: • EGFR Expression isuniversal in SCCHN ; over expression isanegativeprognostic factor after RT. • Quantification of EGFR expression needsfurther study. • EGFRvIII May affect sensitivity to cetuximab, not yet validated in theclinic. 05/01/17 46
  • 47. Early Diagnosis of Cancer: p16/p53/LOH 18q VCA IgA,EBER Predicting Response to concurrent Therapy: ERCC1/RRM1 β- Tubulin Isoform III HPV EGFR Therapeutic Targets and Overcoming Resistance: EGFR/HER2/VEGF EGFRvIII/Aurora kinase Tailored Treatment HPV+ve Tumors HPV –ve, High CIN HPV –ve , Low CIN EGFR Pathway Signature type EXPLORING BIOMARKERS IN HNCa EXPLORING BIOMARKERS IN HNCa Better Therapeutic Ratio Tailored Treatment: RTin Molecular+ve margins RTto N0 Neck in STAT3 Mut 05/01/17 47
  • 48. Association between HPV status and EGFR targeting??  Adequate radiation dose fractionation and Dose?? Patient selection based on biomarkers for therapy???  Combination of chemoRT with EGFR targeting??? EXPLORING BIOMARKERS IN HNCa Unanswered Questions??? 05/01/17 48
  • 49. Thank yo uThank yo u 05/01/17 49

Notes de l'éditeur

  1. Division of Hematology and Oncology, University of Pennsylvania, 3400 Civic Center Blvd, 2PCAM, Philadelphia, PA
  2. DNA-based marker assays might detect gene mutations, deletions, amplifications, or methylation. RNA-based marker assays, which include a recently described class of molecules designated micro-RNAs (miRNA) might detect over- or underexpression of the message, splice differences in the message, or inhibitory miRNAs that prevent translation of other transcripts. Protein-based markers can include overexpression, underexpression, or qualitative abnormalities. One might detect cancer cells in tissues or fluid in which they do not belong, such as regional lymph nodes, circulation, or distant organs (like bone marrow). Detection of abnormal tissue processes induced by an existing cancer, such as neovascularization, can also serve as a marker. An assay for a marker might be for a single molecule, such as amplification of a specific gene or overexpression of a single protein, or it might include a multiparameter analysis, resulting in an index (analogous to using TNM [tumor, necrosis, metastasis] to create a tumor stage) or a profile or “signature,” most commonly developed within gene expression microarray technologies
  3. TheCDKN2A gene locus found at chromosome 9p21 encodes two different transcripts, p16 and p14,which are responsible for cell cycle regulation and degradation of p53 respectively.
  4. HPV is an ~7.9-kb, non-enveloped, double-stranded, circular DNA virus that has a specific tropism for squamous epithelium. HPV-positive tumors tend to have a poorly differentiated and frequently basaloid histology that often lacks keratin. patients with HPV-positive HNSCC are approximately 5 years younger than HPV-negative HNSCC patients, with equal distribution among the sexes.  HPV-positive HNSCC is more likely than HPV-negative HNSCC to occur in the nonsmoker and nondrinker.  Risk factors for HPV-related HNSCC include a high lifetime number of vaginal-sex partners (26 or more), a high lifetime number of oral-sex partners (6 or more),111 and seropositivity for HPV-16 viral capsid protein antibodies,82 which carries a 15-fold increased risk for HNSCC The reason for the improved survival is unclear; however, improved radiation responsiveness, immune surveillance to viral antigens, and the absence of field cancerization in these patients who tend to be nonsmokers have been postulated as possibilities. In addition, E6-related degradation of p53 in HPV-positive cancers may not be functionally equivalent to HPV-negative p53 mutations, and therefore HPV-positive tumors may have an intact apoptotic response to radiation and chemotherapy
  5. Figure 01:Range of EGFR Expression. KK Ang Mod (mean absorbance),SI (Staining Index), QS(Quick score)