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cell fractionation

-----centrifugation
Contents

1.Principle

      i. Basic principle
     ii. Centrifugation
2.procedure
Basic principle
Fact1:The structures in the cell with
      different specific gravities and sizes
      have various sedimentation velocities
      in the same centrifugate field.
Fact2:We can use different mediums or
      velocities in centrifugation to separate
      different structures one by one
      according to the fact 1.
Centrifugation
•Goal:  to separate kinds of cellular
organelles and large molecules
•Equipment: centrifuge
•Classification:
    i : Differential centrifugation
    ii: Density gradient centrifugation
•Analysis: cellular and biochemistry to
measure in quality and quantity
Differential centrifugation

Feature:1.uniform density of medium
         2.progressively higher velocity
Usage: separate subcellular structure or
        orangells with great disparity in size
Sedimentation sequence: large to small
Method: homogenate ,speed up progressively
       and centrifugate one by one
Sedimentation sequence




Cell homogenate Whole cell   Mitochondria microsomes Ribosomes,
                 nucleus     lysosomes    small vesicles Virus,
                             peroxisomes                 Large macro-
                 cytosome
                                                         molecules
       Speed     low                              high
       :
         Size:   large                            small
The preparative ultracentrifuge
Part 2 . procedure
    Execute the mouse with dislocation ,Take out the liver
    from abdominal cavity , Cut into trunks , Wash


 Take half of the liver ,Wash in sucrose(0.25M) for three
 times , Put into 3 ml sucrose(0.25M) ,Cut into small
 pieces ,

     Homogenate for 5 to 8 times , Filter into centrifuge
     tube of 10 ml through six-layer gauze
                                                    Smear 1
             Put 1 ml to ependorf tube(A) ,
            centrifugate for 10min at 3000rpm



        precipitation           supernatant liquid
precipitation              supernatant liquid
                                                           smear2
                                          Put supernatant
Make precipitation the into
                                           liquid to dorf
suspension with 1ml sucrose
                                              tube(B)
(1M)
                                        12000rpm,20min
       3800rpm,10min
                                 Dispose supernatant liquid ,
                                 make the precipitation into
 Dispose supernatant             suspension with 1ml
 liquid , make the               sucrose(0.25M)
 precipitation into suspension
 with a little sucrose(0.25M)            12000rpm,20min


                              precipitation   supernatant liquid
  smear3

                           make the precipitation into     smear4
            smear5          suspension with a little
                               sucrose(0.25M)
1.Dye the nucleic acid     2.Dye the mitochondria
     Smear 1 , 2 , 3               Smear 4 ,
                                   5
Fix in 95% alcohol for
                              Dye in Janus green B
5min , open-air dry
                              for 15 min

Dye in methyl green–
pyronin for 20min , wash       wash , dry , observ
                               e
   Wet in the acetone
   for 2 or 3 times

   wash , dry , observ
   e
将推片自血滴左 侧向右移动




当血滴均匀地附着在两片之间后,再将推 片向左平稳地推移


                将推片自血滴左 侧向右移动
homework :
1. What are the differences of 3 smears
  of nuclei ?and reasons?
2. What are the differences of 2 smears
  of mitochondria ?and reasons?
After experiments
Experimental   appliance should
 be rinsed;
Slides and burettes should be
 taken to the basin;
Animals (after experiment)
 should be taken to the bag;
Sweep the desks and floor.
Thank you!

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3cell fractionation

  • 2. Contents 1.Principle i. Basic principle ii. Centrifugation 2.procedure
  • 3. Basic principle Fact1:The structures in the cell with different specific gravities and sizes have various sedimentation velocities in the same centrifugate field. Fact2:We can use different mediums or velocities in centrifugation to separate different structures one by one according to the fact 1.
  • 4. Centrifugation •Goal: to separate kinds of cellular organelles and large molecules •Equipment: centrifuge •Classification: i : Differential centrifugation ii: Density gradient centrifugation •Analysis: cellular and biochemistry to measure in quality and quantity
  • 5. Differential centrifugation Feature:1.uniform density of medium 2.progressively higher velocity Usage: separate subcellular structure or orangells with great disparity in size Sedimentation sequence: large to small Method: homogenate ,speed up progressively and centrifugate one by one
  • 6. Sedimentation sequence Cell homogenate Whole cell Mitochondria microsomes Ribosomes, nucleus lysosomes small vesicles Virus, peroxisomes Large macro- cytosome molecules Speed low high : Size: large small
  • 8. Part 2 . procedure Execute the mouse with dislocation ,Take out the liver from abdominal cavity , Cut into trunks , Wash Take half of the liver ,Wash in sucrose(0.25M) for three times , Put into 3 ml sucrose(0.25M) ,Cut into small pieces , Homogenate for 5 to 8 times , Filter into centrifuge tube of 10 ml through six-layer gauze Smear 1 Put 1 ml to ependorf tube(A) , centrifugate for 10min at 3000rpm precipitation supernatant liquid
  • 9. precipitation supernatant liquid smear2 Put supernatant Make precipitation the into liquid to dorf suspension with 1ml sucrose tube(B) (1M) 12000rpm,20min 3800rpm,10min Dispose supernatant liquid , make the precipitation into Dispose supernatant suspension with 1ml liquid , make the sucrose(0.25M) precipitation into suspension with a little sucrose(0.25M) 12000rpm,20min precipitation supernatant liquid smear3 make the precipitation into smear4 smear5 suspension with a little sucrose(0.25M)
  • 10. 1.Dye the nucleic acid 2.Dye the mitochondria Smear 1 , 2 , 3 Smear 4 , 5 Fix in 95% alcohol for Dye in Janus green B 5min , open-air dry for 15 min Dye in methyl green– pyronin for 20min , wash wash , dry , observ e Wet in the acetone for 2 or 3 times wash , dry , observ e
  • 12. homework : 1. What are the differences of 3 smears of nuclei ?and reasons? 2. What are the differences of 2 smears of mitochondria ?and reasons?
  • 13. After experiments Experimental appliance should be rinsed; Slides and burettes should be taken to the basin; Animals (after experiment) should be taken to the bag; Sweep the desks and floor.