Deuterium is present in all naturally occurring water, and accounts for 1 in 6420 hydrogen atoms. Seemingly insignificant, that ratio is actually quite impactful in life sciences. Pure deuterium oxide (heavy water) has been found to be toxic to eucharyotic organsims, and has been found to be inhibitory in smaller doses. Here I present results that demonstrate that in even smaller doses the concentration of deuterium has a dramatic effect on life processes. I also show that at the molecular level, deuterium has a stabilizing effect. By simply changing the properties of the solvent, there can be dramatic effects that impact a variety of experiments.
For the entire story, please refer to my dissertation: https://docs.google.com/document/d/1p9-qqF8oUcwNGJjZG3CoKL2xvIhbqKCFQ7_faegNPIU/edit?usp=sharing
3. What is heavy water?
hydrogen deuterium
²H2O
Normal water - H2O Heavy water - D2O
Density 0.998 g/ml Density 1.101 g/ml
Freezing Point 0°C Freezing Point 3.8°C
Boiling Point 100°C Boiling Point 101.4°C
Viscosity 1.002 Viscosity 1.247
pH 7.00 pH 7.43
4. The Biophysical Effects of Heavy Water
Lewis, GN. The biochemistry of water containing hydrogren isotope (1933).
5. “It is not inconceivable that heavy hydrogen,
which exists in small amounts in all natural
water, may actually be essential to some plants
or animals.”
Gilbert N. Lewis
Lewis, GN. The biology of heavy water (1934).
6. Heavy water-life science experimentation
(1933-1970)
Simple organisms Plants Animals
E. coli Tobacco Flies
Yeast Arabidopsis Mice
P. aeruginosa Wheat Dogs
Various pathogens Peas Tadpoles
Paramecium Clover Planaria
Spirogyra Radish Fish
Various algae Kentucky Bluegrass Quail
Humans?
7. Every experiment reported the same results:
1. Pure heavy water is toxic to most organisms
2. Heavy water at lower concentrations inhibits
biological processes
But no one explored Lewis’ hypothesis...
28. E. coli growth in D2O
1.0
99.9% D2O
0.8 60% D2O
30% D2O
Absorbance
0.6
DDW
0.4
DI
0.2
0.0
0 1 2 3 4 5 6 7
Hours
29. E. coli adaptation to D2O
3.0
2.5
Absorbance
2.0
1.5
1.0
0.5
11 25 39
Days
30. Adapted E. coli growth in D2O
3.0
Proj. WT in DI
2.5 D2O cells in DDW
D2O cells in D2O
Absorbance
2.0
1.5
1.0
0.5
0 1 2 3 4 5 6
Hours
31. Adapted E. coli cellular morphology
Adapted cells in DI water Adapted cells in D2O
Normal cells in DI water Normal cells in D2O
32. Adapted E. coli cellular morphology
Normal cells in DI water Adapted cells in D2O
Normal cells in D2O Adapted cells in DI water
33. Summary of deuterium effects on life
1. New phenotypes found in very low deuterium enviornments:
a. Root hairs in tobacco
b. Earlier germination in tobacco
c. Curly roots in arabidopsis
2. Optimal deuterium concentration above normal amounts
a. Tobacco root growth
b. Arabidopsis plant growth
3. D2O adaptation produces new phenotypes
a. E. coli “brainy” colonies
b. E. coli joining
c. Faster growth
36. These chemical effects can be detected physically!
mass spectroscopy nuclear magnetic resonance
(NMR)
fourier transform cavity ring-down
infrared spectroscopy spectroscopy
(FT-IR) (CRDS)
37. ...evidence of hydrogen-deuterium replacement!
machine use provided by Dr. Krishna
assistance provided by Stephen Myers and Alex Haddad
38. HD exchange
Why should we worry?
In low and high D environments, HD exchange/replacement
can affect experimental results.
48. Using optical tweezers to overstretch DNA
tweezer design and development by Pranav Rathi
49. Force (pN)
DNA Length (nm)
Force (pN)
DNA Length (nm)
Force (pN)
DNA Length (nm)
50. Average DNA overstretch force
D2O
75
H2O
Mean Force
Std Error
70
67.6
Force (pN)
65 65.1
60
55
DNA tethers
51. Summary of deuterium effects on molecules
1. D2O stabilizes molecules.
a. Better for single molecule and in-vitro studies
b. It could be used for long term storage of biomolecules.
2. Good probe for solvent effects.
a. Just changing the water affected DNA-DNA interations!
3. HD exchange/replacement:
a. Important to pay attention in low D experiments.
a. Good way to measure local atmospheric isotope ratios.
52. Future work
1. Low D2O concetration effects:
-Deuterium use vs. tolerance
-Lots of potential new discoveries
2. High D2O concentration effects:
-Useful to study rare events
3. Solvent effects:
-Under-utilized in studied of biomolecular interactions
4. HD replacement:
a. Expand studies with CRDS.
53. Ackowledgements
Dr. Steven Koch Dr. Abhaya Datye
-and all of KochLab -NSMS IGERT
Dr. Mary Ann Osley Dr. Maggie Werner-Washburne
-and the entire Osley Lab -IMSD
Dr. Robert Olendorf Dr. Krishna, Dr. Osinski, and
Dr. David Dunlap Dr. Sharpe
Mom and Dad
my brother Jason
All my friends!