Short Story: Unveiling the Reasoning Abilities of Large Language Models by Ke...
Genomic futures v_pitt_kent_osu
1. Ben Busby, Ph.D.
Lead, Bioinformatics Training, NCBI
Chair, Department of Bioinformatics and Data Science, FAES
ben.busby@nih.gov
Efficiently Leveraging Commercial and Open Source Bioinformatics Tools for
Clinical Interventions and Research Discoveries from Very Large Datasets
2. Please note that all views are my own and not necessarily those
of any Federal agency. No mention of any commercial or non-
profit entity should be considered an endorsement.
Slides available at:
https://www.slideshare.net/benbusby/genomic-futures-v2
• Human Genomic Variants – Chronic Disease and Cancer
• Viruses – Zika
• Bacteria – Food Borne Pathogens
• Data Transfer and Storage
48. • March 20-22, NIH Campus
• May 22-24, UC BioFrontiers Institute Boulder CO
• June 19-21, NYGC
• August 17-19, NIH Campus
• September 25-27, Pittsburgh, PA
• October 11-13, Microbial and Metagenomics, NCBI
(with ASM and CDC)
49. Come work at NCBI for 4-6 weeks!
Email bioinformatics-training@ncbi.nlm.nih.gov
for more information!
50. My View of Data Transfer Principles
• Metadata Search
• Rapid NoSQL (for now)
• Integration
• Non-ambiguous identifiers
• Transferring Small amounts of Data
• Data still gets transferred in the cloud
• Underlying structure
• Finding specific data from validated formats
• Democratization of Data
• Rapid comparison by domain experts
• Reporting
• Metrics to report data upload and [unique IP] download of datasets
• Post-publication User Review