GBSN - Microbiology (Unit 3)Defense Mechanism of the body
W T Lopes da Silva soil carbon analysis methods july 2010
1. Wilson Tadeu Lopes da Silva1, Débora Marcondes Bastos Pereira Milori1,
Ladislau Martin-Neto1,2, Adolpho José Posadas1,3, Aline Segnini1,3, Roberto
1
Quiroz3
1- Brazilian Agricultural Research Corporation (Embrapa) – Embrapa Agricultural
Instrumentation Center – São Carlos/SP, Brazil.
2- Virtual Laboratories of Embrapa abroad – Labex – Beltsville/MD, USA
3- International Potato Center (CIP) – Lima, Peru.
Rome – Italy
13 July 2010
2. 2
• Does the determination of Carbon content in the
soil, satisfactory for analysis of balance of carbon
in agriculture areas?
• Do the actual laboratory analyses adequate in
terms of practice, representativity, costs, etc.?
3. 3
Our proposal
•To use Fluorescence parameters to produce a
quick indicator for changes in structure of SOM;
•Measure this indicator using whole soil;
We built an apparatus to evaluate the feasibility of using laser-induced
fluorescence spectroscopy (LIFS) for whole soil analysis
4. 4
Portable Laser-Induced Fluorescence
Spectroscope
Optical Bunddle
Profile
Excitation Fibers
Emission Fiber
Laser
Miniature spectrometer
Filter
Optical bunddle
Lap-top
soil
Miniature spectrometer
Segnine, A.; Milori, D.; et al. Spectroscopic assessment of soil organic matter in wetlands from the high Andes,
accepted in Soil Science Society of America Journal
7. HLIF = Humification Index
7
Laser-Induced Fluorescence Spectroscopy
400 450 500 550 600 650 700
3
2
1
0
NATURAL SOIL
HEATED SOIL (600°C)
Intensity (a.u.)
λ (nm)
HLIF = Area
C
Milori et al.. Soil Science Society of America Journal 70 (1): 57-63 JAN-FEB 2006
8. 8
Laser-Induced Fluorescence Spectroscopy
3.0
2.5
2.0
1.5
1.0
0.5
R=0.85; P<0.0001
0.05 0.10 0.15 0.20 0.25 0.30
HLIF ( Whole Soil)
A4/A1 (HA in solution)
Milori et al.. Soil Science Society of America Journal 70 (1): 57-63 Jan-Feb 2006
Segnini, A.; Milori, D.; et al. Soil Science Society of America Journal. Acepted to be published.
9. 9
Sample preparation
soil samples from
experimental area
manual cleaning,
and after the
samples are sieved
15 ton of
pressure
3 pellets of
each sample
(1 g)
Cost equipment ~ US$ 30.000,00
Cost / Analysis : US$ 0.50
10. 10
Portable LIFS system
Advantages
- Faster and cleaner process;
- Low cost;
- It is possible a large scale measurements;
- Allow analyses of SOM near its natural state;
- Contribution of Humin is taking into account in the analyses;
- To allow evaluation of changes in SOM according to soil management.
Disadvantages
- It is not a selective technique. It is difficult to identify structures;
- Quenching effect due to interaction with metal can occur;
- For organic soils it is necessary to take care with Inner Filter Effect.
11. To quantify soil carbon in a clean and agile
way using methods economically viable
11
¾¾Determination by Near Infrared Spectroscopy (NIRS)
¾¾Texture (Sand, Clay, and Silt)
¾¾Soil organic matter
¾¾Microbial activity
¾¾Determination by Laser Induced Breakdown
Spectroscopy (LIBS)
12. 12
What is LIBS?
¾¾Laser Induced Breakdown Spectroscopy (LIBS) is an emerging
analytical technique based on atomic and ionic emission of elemental
sample constituents.
¾¾During the LIBS analytical process the sample is irradiated by a
highly energetic laser pulse and absorbs this energy. The high
temperature of ablated material generates a small plasma plume. As
result of the temperature, the ablated material breaks down into
excited ionic and atomic species.
sample
Pulsed laser
emission
Plasma
13. 13
What is LIBS?
¾¾During the plasma cooling, the excited species return to their ground
state emitting electromagnetic radiation in characteristic wavelengths.
¾¾In this sense, the analysis of sample emission spectra gives a qualitative
view of sample elemental composition.
20. 20
Sample preparation
soil samples from
experimental area
manual cleaning,
and after the
samples are sieved
15 ton of
pressure
1 pellet of
each sample
(1 g)
Cost equipment ~ US$ 50.000,00
Cost / Analysis : US$ 0.50
21. 21
Soils & Humic Substances
Leader: Dr. Ladislau Martin-Neto
Research team: Débora Milori
Silvio Crestana
Wilson T. L. da Silva
Marcelo L. Simões
Carlos Vaz
Luiz A. Colnago
Ednaldo Ferreira
Adolfo Posadas
Roberto Quiroz
Pos-doc: Edilene C. Ferreira
Aline Segnini
Students
Cleber Hilário dos Santos
Bruno H. Martins
Lilian F. de Almeida
Lívia Favoretto
Mariani Mussi
Camila Carvalho
André Venâncio
Marcelo Cardinalli
Mariana Russo
Marina França-Silva
Bruna D.L. Pinto
Thais Oahshi
Lilian F. de Almeida
Tatiana M. Ferrarezi
Partnerships: